Guide to the Human Genome
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Name: PCCA Sequence: fasta or formatted (702aa) NCBI GI: 189095269
Description:

propionyl-Coenzyme A carboxylase, alpha polypeptide isoform b

Referenced in:

Amino Acid Catabolism
Fatty Acid Synthesis

Other entries for this name:
alt prot [728aa] propionyl-Coenzyme A carboxylase, alpha polypeptide isoform a pre...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         65           2
 C cysteine            1.4         10           1
 D aspartate           5.6         39           2
 E glutamate           6.6         46           2
 F phenylalanine       3.3         23           1
 G glycine             7.4         52           4
 H histidine           2.1         15           1
 I isoleucine          6.1         43           2
 K lysine              6.3         44           2
 L leucine             8.0         56           2
 M methionine          3.1         22           1
 N asparagine          3.6         25           2
 P proline             3.7         26           2
 Q glutamine           3.6         25           2
 R arginine            5.7         40           2
 S serine              7.1         50           2
 T threonine           4.7         33           1
 V valine              9.4         66           3
 W tryptophan          1.0          7           1
 Y tyrosine            2.1         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   propionyl-Coenzyme A carboxylase, alpha polypeptide... 
PCCA                  0.990   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
MCCC1                 0.330   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr...
PC                    0.259   pyruvate carboxylase precursor 
PC                    0.259   pyruvate carboxylase precursor 
PC                    0.259   pyruvate carboxylase precursor 
ACACA                 0.164   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.164   acetyl-Coenzyme A carboxylase alpha isoform 4 
ACACA                 0.164   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.164   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.164   acetyl-Coenzyme A carboxylase alpha isoform 1 
ACACB                 0.162   acetyl-Coenzyme A carboxylase beta 
CAD                   0.028   carbamoylphosphate synthetase 2/aspartate transcarba...
CPS1                  0.023   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.023   carbamoyl-phosphate synthetase 1 isoform b precursor...
CPS1                  0.021   carbamoyl-phosphate synthetase 1 isoform c 
DBT                   0.006   dihydrolipoamide branched chain transacylase precur...
ANAPC7                0.005   anaphase-promoting complex subunit 7 isoform b [Hom...
ANAPC7                0.005   anaphase-promoting complex subunit 7 isoform a [Hom...
GART                  0.004   phosphoribosylglycinamide formyltransferase, phospho...
GART                  0.004   phosphoribosylglycinamide formyltransferase, phosphor...
GART                  0.004   phosphoribosylglycinamide formyltransferase, phosph...
GART                  0.004   phosphoribosylglycinamide formyltransferase, phosph...
C12orf51              0.004   chromosome 12 open reading frame 51 
LOC100133591          0.004   PREDICTED: similar to MAP kinase 3c 
LOC100133591          0.004   PREDICTED: similar to mitogen-activated protein kin...
MAP2K3                0.004   mitogen-activated protein kinase kinase 3 isoform A ...
MAP2K3                0.004   mitogen-activated protein kinase kinase 3 isoform B ...
POLR2B                0.004   DNA directed RNA polymerase II polypeptide B 
RIMKLA                0.004   ribosomal modification protein rimK-like family mem...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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