Guide to the Human Genome
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Name: MCCC1 Sequence: fasta or formatted (725aa) NCBI GI: 116805327
Description:

methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) precursor

Referenced in:

Amino Acid Catabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         68           3
 C cysteine            1.2          9           1
 D aspartate           4.3         31           2
 E glutamate           7.7         56           4
 F phenylalanine       3.3         24           1
 G glycine             6.6         48           4
 H histidine           3.2         23           2
 I isoleucine          6.1         44           2
 K lysine              6.5         47           2
 L leucine             7.0         51           3
 M methionine          3.6         26           1
 N asparagine          3.4         25           2
 P proline             4.3         31           3
 Q glutamine           4.4         32           2
 R arginine            5.7         41           2
 S serine              7.2         52           4
 T threonine           5.2         38           2
 V valine              7.4         54           2
 W tryptophan          0.7          5           1
 Y tyrosine            2.8         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   methylcrotonoyl-Coenzyme A carboxylase 1 (alpha) pr... 
PCCA                  0.317   propionyl-Coenzyme A carboxylase, alpha polypeptide...
PCCA                  0.314   propionyl-Coenzyme A carboxylase, alpha polypeptide ...
PC                    0.249   pyruvate carboxylase precursor 
PC                    0.249   pyruvate carboxylase precursor 
PC                    0.249   pyruvate carboxylase precursor 
ACACA                 0.149   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.149   acetyl-Coenzyme A carboxylase alpha isoform 4 
ACACA                 0.149   acetyl-Coenzyme A carboxylase alpha isoform 3 
ACACA                 0.149   acetyl-Coenzyme A carboxylase alpha isoform 2 
ACACA                 0.149   acetyl-Coenzyme A carboxylase alpha isoform 1 
ACACB                 0.149   acetyl-Coenzyme A carboxylase beta 
CPS1                  0.026   carbamoyl-phosphate synthetase 1 isoform c 
CPS1                  0.026   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.026   carbamoyl-phosphate synthetase 1 isoform b precursor...
CAD                   0.021   carbamoylphosphate synthetase 2/aspartate transcarba...
DBT                   0.011   dihydrolipoamide branched chain transacylase precur...
RIMKLA                0.008   ribosomal modification protein rimK-like family mem...
RIMKLB                0.007   ribosomal modification protein rimK-like family mem...
PDHX                  0.006   pyruvate dehydrogenase complex, component X isoform...
PDHX                  0.006   pyruvate dehydrogenase complex, component X isoform...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phospho...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phosphor...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phosph...
GART                  0.006   phosphoribosylglycinamide formyltransferase, phosph...
TTN                   0.005   titin isoform N2-A 
TTN                   0.005   titin isoform novex-2 
TTN                   0.005   titin isoform novex-1 
TTN                   0.005   titin isoform N2-B 
ANKRD12               0.004   ankyrin repeat domain 12 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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