Guide to the Human Genome
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Name: DEFB112 Sequence: fasta or formatted (113aa) NCBI GI: 82734217
Description:

beta-defensin 112

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5          4           1
 C cysteine            7.1          8           2
 D aspartate           5.3          6           2
 E glutamate           6.2          7           1
 F phenylalanine       2.7          3           1
 G glycine             4.4          5           2
 H histidine           4.4          5           2
 I isoleucine          6.2          7           1
 K lysine              8.8         10           1
 L leucine             3.5          4           2
 M methionine          1.8          2           1
 N asparagine          3.5          4           2
 P proline             4.4          5           1
 Q glutamine           1.8          2           1
 R arginine            7.1          8           1
 S serine              9.7         11           2
 T threonine          12.4         14           2
 V valine              1.8          2           1
 W tryptophan          2.7          3           1
 Y tyrosine            2.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-defensin 112 
DEFB111               0.116   beta-defensin 111 
DEFB110               0.058   beta-defensin 110 
DEFB114               0.040   beta-defensin 114 
DEFB133               0.027   PREDICTED: defensin, beta 133 
DEFB133               0.027   PREDICTED: defensin, beta 133 
DEFB133               0.027   PREDICTED: beta-defensin 133 
DEFB106A              0.018   defensin, beta 106A precursor 
DEFB106B              0.018   defensin, beta 106B precursor 
DLK1                  0.013   delta-like 1 homolog 
DEFB104A              0.013   defensin, beta 104A precursor 
SPAG11B               0.013   sperm associated antigen 11B isoform C preproprotein...
DEFB104B              0.013   defensin, beta 104B precursor 
DEFB116               0.009   beta-defensin 116 
LOC100291924          0.009   PREDICTED: similar to astrotactin 2 
DEFB113               0.009   beta-defensin 113 
TNFRSF11A             0.004   tumor necrosis factor receptor superfamily, member 11...
DEFB121               0.004   defensin, beta 121 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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