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Search of human proteins with 100913192
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|100913192 AMP-activated protein kinase gamma2 subunit
isoform c [Homo sapiens]
(525 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|100913192 AMP-activated protein kinase gamma2 subunit isoform... 1043 0.0
gi|33186925 AMP-activated protein kinase gamma2 subunit isoform ... 1043 0.0
gi|100913189 AMP-activated protein kinase gamma2 subunit isoform... 643 0.0
gi|4506061 AMP-activated protein kinase, noncatalytic gamma-1 su... 473 e-133
gi|47132577 AMP-activated protein kinase, non-catalytic gamma-3 ... 420 e-117
gi|47132575 AMP-activated protein kinase, noncatalytic gamma-1 s... 370 e-102
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 49 1e-05
gi|188536004 zinc finger protein 469 [Homo sapiens] 47 3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 45 1e-04
gi|146198654 zinc finger protein 768 [Homo sapiens] 45 2e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 44 4e-04
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 44 4e-04
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 44 4e-04
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 44 4e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 44 4e-04
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 44 4e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 44 5e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 43 6e-04
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 43 8e-04
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 43 8e-04
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 43 8e-04
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 42 0.001
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 42 0.002
gi|210032580 SET domain containing 1B [Homo sapiens] 41 0.002
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 0.002
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 40 0.005
gi|189491742 ataxin 7 isoform b [Homo sapiens] 40 0.005
gi|4506797 ataxin 7 isoform a [Homo sapiens] 40 0.005
>gi|100913192 AMP-activated protein kinase gamma2 subunit isoform c
[Homo sapiens]
Length = 525
Score = 1043 bits (2697), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 1 MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT 60
MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT
Sbjct: 1 MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT 60
Query: 61 VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS 120
VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS
Sbjct: 61 VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS 120
Query: 121 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA 180
TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA
Sbjct: 121 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA 180
Query: 181 PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD 240
PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD
Sbjct: 181 PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD 240
Query: 241 TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH 300
TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH
Sbjct: 241 TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH 300
Query: 301 KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI 360
KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI
Sbjct: 301 KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI 360
Query: 361 LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD 420
LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD
Sbjct: 361 LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD 420
Query: 421 ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI 480
ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI
Sbjct: 421 ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI 480
Query: 481 VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE 525
VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE
Sbjct: 481 VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE 525
>gi|33186925 AMP-activated protein kinase gamma2 subunit isoform a
[Homo sapiens]
Length = 569
Score = 1043 bits (2697), Expect = 0.0
Identities = 525/525 (100%), Positives = 525/525 (100%)
Query: 1 MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT 60
MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT
Sbjct: 45 MPLLDGDLEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKT 104
Query: 61 VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS 120
VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS
Sbjct: 105 VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPS 164
Query: 121 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA 180
TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA
Sbjct: 165 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYA 224
Query: 181 PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD 240
PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD
Sbjct: 225 PSKAAALAAALGPAEAGMLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFD 284
Query: 241 TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH 300
TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH
Sbjct: 285 TTLQVKKAFFALVANGVRAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEH 344
Query: 301 KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI 360
KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI
Sbjct: 345 KIETWRELYLQETFKPLVNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRI 404
Query: 361 LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD 420
LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD
Sbjct: 405 LKFLQLFMSDMPKPAFMKQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVD 464
Query: 421 ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI 480
ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI
Sbjct: 465 ESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRI 524
Query: 481 VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE 525
VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE
Sbjct: 525 VRAEVHRLVVVNEADSIVGIISLSDILQALILTPAGAKQKETETE 569
>gi|100913189 AMP-activated protein kinase gamma2 subunit isoform b
[Homo sapiens]
Length = 328
Score = 643 bits (1659), Expect = 0.0
Identities = 328/328 (100%), Positives = 328/328 (100%)
Query: 198 MLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGV 257
MLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGV
Sbjct: 1 MLEKLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGV 60
Query: 258 RAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPL 317
RAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPL
Sbjct: 61 RAAPLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPL 120
Query: 318 VNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFM 377
VNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFM
Sbjct: 121 VNISPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFM 180
Query: 378 KQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 437
KQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL
Sbjct: 181 KQNLDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINL 240
Query: 438 AAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSI 497
AAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSI
Sbjct: 241 AAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSI 300
Query: 498 VGIISLSDILQALILTPAGAKQKETETE 525
VGIISLSDILQALILTPAGAKQKETETE
Sbjct: 301 VGIISLSDILQALILTPAGAKQKETETE 328
>gi|4506061 AMP-activated protein kinase, noncatalytic gamma-1
subunit isoform 1 [Homo sapiens]
Length = 331
Score = 473 bits (1218), Expect = e-133
Identities = 233/303 (76%), Positives = 270/303 (89%)
Query: 211 DSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAAPLWESKKQSF 270
+S + VY FM+SH+CYD++PTSSKLVVFDT+LQVKKAFFALV NGVRAAPLW+SKKQSF
Sbjct: 23 ESNNSVYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSF 82
Query: 271 VGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNISPDASLFDAV 330
VGMLTITDFINILHRYYKS +VQIYELEEHKIETWRE+YLQ++FKPLV ISP+ASLFDAV
Sbjct: 83 VGMLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAV 142
Query: 331 YSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYH 390
SLI+NKIHRLPVIDP SGN LYILTHKRILKFL+LF+++ PKP FM ++L+EL IGTY
Sbjct: 143 SSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYA 202
Query: 391 NIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITV 450
NIA + TP+ AL IFV+ R+SALPVVDE G+VVDIYSKFDVINLAAEKTYNNLD++V
Sbjct: 203 NIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSV 262
Query: 451 TQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQAL 510
T+ALQHRS YFEGV+KC E LETI++R+V AEVHRLVVV+E D + GI+SLSDILQAL
Sbjct: 263 TKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 322
Query: 511 ILT 513
+LT
Sbjct: 323 VLT 325
>gi|47132577 AMP-activated protein kinase, non-catalytic gamma-3
subunit [Homo sapiens]
Length = 489
Score = 420 bits (1079), Expect = e-117
Identities = 200/316 (63%), Positives = 267/316 (84%), Gaps = 1/316 (0%)
Query: 201 KLEFEDEAVEDSESGVYMRFMRSHKCYDIVPTSSKLVVFDTTLQVKKAFFALVANGVRAA 260
KL ++DE + + +YMRFM+ H CYD + TSSKLV+FDT L++KKAFFALVANGVRAA
Sbjct: 169 KLGWDDE-LRKPGAQIYMRFMQEHTCYDAMATSSKLVIFDTMLEIKKAFFALVANGVRAA 227
Query: 261 PLWESKKQSFVGMLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNI 320
PLW+SKKQSFVGMLTITDFI +LHRYY+SP+VQIYE+E+HKIETWRE+YLQ FKPLV+I
Sbjct: 228 PLWDSKKQSFVGMLTITDFILVLHRYYRSPLVQIYEIEQHKIETWREIYLQGCFKPLVSI 287
Query: 321 SPDASLFDAVYSLIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQN 380
SP+ SLF+AVY+LIKN+IHRLPV+DP+SGN L+ILTHKR+LKFL +F S +P+P+F+ +
Sbjct: 288 SPNDSLFEAVYTLIKNRIHRLPVLDPVSGNVLHILTHKRLLKFLHIFGSLLPRPSFLYRT 347
Query: 381 LDELGIGTYHNIAFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAE 440
+ +LGIGT+ ++A + PI+ AL+IFV+RR+SALPVV+E G+VV +YS+FDVI+LAA+
Sbjct: 348 IQDLGIGTFRDLAVVLETAPILTALDIFVDRRVSALPVVNECGQVVGLYSRFDVIHLAAQ 407
Query: 441 KTYNNLDITVTQALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGI 500
+TYN+LD++V +AL+ R+ EGV+ C E L ++DRI R +VHRLV+V+E ++G+
Sbjct: 408 QTYNHLDMSVGEALRQRTLCLEGVLSCQPHESLGEVIDRIAREQVHRLVLVDETQHLLGV 467
Query: 501 ISLSDILQALILTPAG 516
+SLSDILQAL+L+PAG
Sbjct: 468 VSLSDILQALVLSPAG 483
>gi|47132575 AMP-activated protein kinase, noncatalytic gamma-1
subunit isoform 2 [Homo sapiens]
Length = 247
Score = 370 bits (950), Expect = e-102
Identities = 184/241 (76%), Positives = 213/241 (88%)
Query: 273 MLTITDFINILHRYYKSPMVQIYELEEHKIETWRELYLQETFKPLVNISPDASLFDAVYS 332
MLTITDFINILHRYYKS +VQIYELEEHKIETWRE+YLQ++FKPLV ISP+ASLFDAV S
Sbjct: 1 MLTITDFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSS 60
Query: 333 LIKNKIHRLPVIDPISGNALYILTHKRILKFLQLFMSDMPKPAFMKQNLDELGIGTYHNI 392
LI+NKIHRLPVIDP SGN LYILTHKRILKFL+LF+++ PKP FM ++L+EL IGTY NI
Sbjct: 61 LIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEFPKPEFMSKSLEELQIGTYANI 120
Query: 393 AFIHPDTPIIKALNIFVERRISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQ 452
A + TP+ AL IFV+ R+SALPVVDE G+VVDIYSKFDVINLAAEKTYNNLD++VT+
Sbjct: 121 AMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTK 180
Query: 453 ALQHRSQYFEGVVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALIL 512
ALQHRS YFEGV+KC E LETI++R+V AEVHRLVVV+E D + GI+SLSDILQAL+L
Sbjct: 181 ALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 240
Query: 513 T 513
T
Sbjct: 241 T 241
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 48.9 bits (115), Expect = 1e-05
Identities = 58/196 (29%), Positives = 79/196 (40%), Gaps = 28/196 (14%)
Query: 23 FGPGSP-----SKGFFSRGPQPRPSSPMSAPVRPKTSPGSPK------TVFPFSYQESP- 70
+ P SP S + P P+SP +P P SP SP+ T P S SP
Sbjct: 1769 YSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPS 1828
Query: 71 -----PRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSS--SPSTPT 123
P SP+ S + SS E +P S P SP ++ S K S S SP+TP
Sbjct: 1829 SPSYSPTSPKYTPTSPSYSPSSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYSPTTPK 1887
Query: 124 QVTKQHTFPLESYKHEPERLENRIYASSSP--PDTGQRFCPSS-FQSPTRP--PLASPTH 178
T+ S + P + Y+ +SP T ++ P+S SPT P SPT
Sbjct: 1888 YSPTSPTYSPTSPVYTPTSPK---YSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTS 1944
Query: 179 YAPSKAAALAAALGPA 194
S + + PA
Sbjct: 1945 PGYSPTSPTYSLTSPA 1960
Score = 45.1 bits (105), Expect = 2e-04
Identities = 54/161 (33%), Positives = 71/161 (44%), Gaps = 25/161 (15%)
Query: 23 FGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQ-ESPPRSPRRMSFSG 81
+ P SPS + P P+SP +P P SP SP SY SP SP S+S
Sbjct: 1692 YSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSP------SYSPTSPSYSPTSPSYSP 1743
Query: 82 IFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPE 141
+ S +SPN P TSP +S + + +S TPT T P S
Sbjct: 1744 TSPNYS-PTSPNYTP-TSPS----YSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSY 1797
Query: 142 RLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPS 182
+ Y+ SSP R+ P QSPT P +SP+ Y+PS
Sbjct: 1798 SPTSPSYSPSSP-----RYTP---QSPTYTP-SSPS-YSPS 1828
Score = 44.3 bits (103), Expect = 3e-04
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 23 FGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESP------PRSPRR 76
+ P SPS + P+ P+SP +P PK SP SPK P S SP P SP
Sbjct: 1839 YTPTSPS--YSPSSPEYTPTSPKYSPTSPKYSPTSPK-YSPTSPTYSPTTPKYSPTSPTY 1895
Query: 77 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTS-----GLSSSPSTPTQVTKQHTF 131
S ++ +S + SP S P SP ++ S S G + SP++P T+
Sbjct: 1896 SPTSPVYTPTSPKYSPTS-PTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTY 1954
Query: 132 PLESYKHEPE 141
L S P+
Sbjct: 1955 SLTSPAISPD 1964
Score = 38.5 bits (88), Expect = 0.015
Identities = 47/166 (28%), Positives = 66/166 (39%), Gaps = 17/166 (10%)
Query: 21 SPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFS 80
SP PG S S G PS ++P SPG P SP SP S+S
Sbjct: 1571 SPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYS 1630
Query: 81 GIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEP 140
+SPN +P TSP S S + S SP++P+ ++ S + P
Sbjct: 1631 --------PTSPNYSP-TSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680
Query: 141 ERLENRIYASSSP--PDTGQRFCPSSFQSPTRPPLASPT--HYAPS 182
+ Y+ +SP T + P+S P SPT Y+P+
Sbjct: 1681 ---TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1723
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 47.4 bits (111), Expect = 3e-05
Identities = 53/180 (29%), Positives = 71/180 (39%), Gaps = 27/180 (15%)
Query: 43 SPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGG 102
SP T PG+ F + + P + + +S ES P +PAT+ G
Sbjct: 544 SPALFTYNGMTDPGAQPLFFGVAQPQVSPHGTPSLPPPRVVGASPSES-PLPSPATNTAG 602
Query: 103 IRFFSRSRKTSGLSSSPSTPTQVTKQHTFPL--ESYKHEPERLENRIYASSSPPDTGQRF 160
S S +SSSP+ P+ Q PL ++ H P + P +TG
Sbjct: 603 ----STCSSLSPMSSSPANPSSEESQLPGPLGPSAFFHPP----------THPQETG--- 645
Query: 161 CPSSFQSPTRPPLASPTHYAPSKAAAL---AAALGPAEA-GMLEKLEFEDEAVEDSESGV 216
S F SP PP + PTHY P A A A LG A LE+ F E E G+
Sbjct: 646 --SPFPSP-EPPHSLPTHYQPEPAKAFPFPADGLGAEGAFQCLEETPFPHEGPEVGRGGL 702
Score = 30.4 bits (67), Expect = 4.1
Identities = 46/180 (25%), Positives = 60/180 (33%), Gaps = 20/180 (11%)
Query: 24 GPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 83
G GS G S G +PR + + RP P P+T P S + PR PR +
Sbjct: 966 GSGSGGGGRAS-GLRPRRNDGLGE--RPPPRPRRPRTQAPGSRADPAPRVPRAAALPEET 1022
Query: 84 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 143
RSS + P P P R RK G + ++ +Q L Y E
Sbjct: 1023 RSSRRRRLP---PRKDP-------RKRKARGGAWGKELILKIVQQKN-RLREYDFASESE 1071
Query: 144 ENRIYASSSPPDTGQRFCPSS------FQSPTRPPLASPTHYAPSKAAALAAALGPAEAG 197
E+ P G+R Q P P A +A A P E G
Sbjct: 1072 EDEQPPPRGPGFRGRRGRGEKRKEVELTQGPREDEPQKPRKAARQEAGGDGAPANPEEPG 1131
Score = 29.3 bits (64), Expect = 9.2
Identities = 47/200 (23%), Positives = 69/200 (34%), Gaps = 42/200 (21%)
Query: 18 KVDSPFGPGS----PSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRS 73
++ P GP + P+ + P P P P S P + P FPF
Sbjct: 624 QLPGPLGPSAFFHPPTHPQETGSPFPSPEPPHSLPTHYQPEPAK---AFPFPADG----- 675
Query: 74 PRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPL 133
+ G F+ + P+ P GG++ F R + P PT H F L
Sbjct: 676 ---LGAEGAFQCLEETPFPHEGPEVGRGGLQGFPR--------APPPYPT-----HHFSL 719
Query: 134 ESYKHEPE------RLENRIYASSSPPDTGQRFC--------PSSFQSPTRPPLASPTHY 179
S + R +R Y+S + ++FC +SP P L SP
Sbjct: 720 SSASLDQLDVLLTCRQCDRNYSSLAAFLAHRQFCGLLLARAKDGHQRSPGPPGLPSPPAA 779
Query: 180 APSKAAALAAALGPAEAGML 199
A A A L A+ +L
Sbjct: 780 PRVPADAHAGLLSHAKTFLL 799
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 45.4 bits (106), Expect = 1e-04
Identities = 45/179 (25%), Positives = 63/179 (35%), Gaps = 18/179 (10%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 84
P SP G + P+ P++P + P PK P +P P +PP + G+
Sbjct: 1225 PPSPKGGLATPSPKGAPTTPAATPPSPKGGPATP----PPKGAPTPPAATPPSLKGGLAT 1280
Query: 85 SSSKES---------SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 135
K + SP PATSP + SP TP P
Sbjct: 1281 PPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP----PPKGAPTPP 1336
Query: 136 YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPA 194
P +++P G PSS + PT PP A+P+H + GPA
Sbjct: 1337 AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT-PPAATPSHKGGPAMTPPSPKRGPA 1394
Score = 37.4 bits (85), Expect = 0.034
Identities = 50/187 (26%), Positives = 71/187 (37%), Gaps = 23/187 (12%)
Query: 21 SPFG-PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSP---GSPKTVFPFSYQESPPRSPRR 76
SP G PG+P P P SP P P T+P G P T P +P
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 77 MSFSGIFRSSSKES----SPNSNPATSPGGIRFFSRSRKTSGLS-SSPSTPTQ--VTKQH 129
+ S K SP +P TSP I + + ++ +TP++ +T
Sbjct: 1379 KGGPAMTPPSPKRGPAIPSPKGDP-TSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPA 1437
Query: 130 TFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAA 189
P+ S K P A+S+P G PSS PT P + P+ P +A
Sbjct: 1438 VTPV-SLKKAP--------ATSAPK--GGPATPSSKGDPTLPAVTPPSPKEPPAPKQVAT 1486
Query: 190 ALGPAEA 196
+ P +A
Sbjct: 1487 SSSPKKA 1493
Score = 35.4 bits (80), Expect = 0.13
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 24/179 (13%)
Query: 21 SPFGPGSPSKGFFSRGPQPRPSSP--MSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMS 78
SP P +P + S P+ P++P M AP P P SPK V P +P
Sbjct: 1474 SPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAP---- 1529
Query: 79 FSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGL---SSSPSTPT--QVTKQHTFPL 133
+ S ++ A P + S +KT + +P+TP+ + +
Sbjct: 1530 -TATLLSKKTPATLAPKEALIPPAMTVPS-PKKTPAIPTPKEAPATPSSKEASSPPAVTP 1587
Query: 134 ESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALG 192
+YK P E I PP PS ++PT P + P +P K A A G
Sbjct: 1588 STYKGAPSPKELLI-----PPAVTS---PSPKEAPTPPAVTPP---SPEKGPATPAPKG 1635
Score = 34.7 bits (78), Expect = 0.22
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 89 ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHT----FPLESYKHEPERLE 144
E S S A+S G + + + S G+S SP T TK+ + P+ + +E
Sbjct: 773 EDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVE 832
Query: 145 NRIYASSSPPDTGQRFCPSSFQSPTRP-PLASPTHYAPSKAAALAAALGPAE 195
+S G + P++ SPT P P +PT A + + L P E
Sbjct: 833 ASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKE 884
Score = 34.7 bits (78), Expect = 0.22
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 25/168 (14%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 84
P SP G + P+ P++P + P PK +P + + P SP+ G+
Sbjct: 1133 PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK----GGLAT 1188
Query: 85 SSSK--ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTP--TQVTKQHTFPLESYKHEP 140
S K ++P + P + GG+ T +P+TP T + + S K P
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGL-------ATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1241
Query: 141 ERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALA 188
A++ P G P +PT PP A+P PS LA
Sbjct: 1242 -----TTPAATPPSPKGGPATPPPKGAPT-PPAATP----PSLKGGLA 1279
Score = 33.9 bits (76), Expect = 0.37
Identities = 51/195 (26%), Positives = 68/195 (34%), Gaps = 20/195 (10%)
Query: 8 LEGSGKHSSRKVDSPFG-PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVF---- 62
+ S +R +P G P SPS P+ P+ P + P PK P +P +
Sbjct: 913 MTSSSPKKARATPAPKGIPASPS-------PKGAPTPPAATPPSPKGGPATPSPKWAPTP 965
Query: 63 PFSYQESPPRSPRRMSFSGI-FRSSSKESSPNSNPAT-SPGGIRFFSRSRKTSGLSSSPS 120
P + SP P S G ++ SP PAT SP G S S +
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAA 1025
Query: 121 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPL-ASPTHY 179
TP K + P + P+ P T PS P P L +PT
Sbjct: 1026 TP--FPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPT-- 1081
Query: 180 APSKAAALAAALGPA 194
P A + GPA
Sbjct: 1082 -PPAATPPSPKGGPA 1095
Score = 33.9 bits (76), Expect = 0.37
Identities = 39/163 (23%), Positives = 63/163 (38%), Gaps = 31/163 (19%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 84
P SP G + P+ P++P + P PK +P + + P SP+ G+
Sbjct: 1156 PPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK----GGLAT 1211
Query: 85 SSSK--ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 142
S K ++P + P + GG+ T +P+TP S K P
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGL-------ATPSPKGAPTTPAATP-------PSPKGGP-- 1255
Query: 143 LENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHY-APSKA 184
++PP G P++ + LA+P H AP+ A
Sbjct: 1256 --------ATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPA 1290
Score = 33.5 bits (75), Expect = 0.49
Identities = 43/181 (23%), Positives = 63/181 (34%), Gaps = 16/181 (8%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 84
P SP G + P+ P+ P + P PK P +P + + P SP+ G
Sbjct: 947 PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPK-----GGPA 1001
Query: 85 SSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE 144
+ S + +P T P + + G S+ P+ K K P
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAP---- 1057
Query: 145 NRIYASSSPPDTGQRFCPSSFQSPTRP------PLASPTHYAPSKAAALAAALGPAEAGM 198
A++ P G PS +PT P P P +P A AA P+ G
Sbjct: 1058 -TTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGG 1116
Query: 199 L 199
L
Sbjct: 1117 L 1117
Score = 33.5 bits (75), Expect = 0.49
Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 26/156 (16%)
Query: 16 SRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPR 75
S K P SP +G P+ P+SP P+ PK +P +P T
Sbjct: 1377 SHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVT--------------- 1421
Query: 76 RMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 135
G S + +P PA +P ++ ++ TS P+TP+ T P +
Sbjct: 1422 ---REGAATPSKGDLTP---PAVTPVSLK---KAPATSAPKGGPATPSS-KGDPTLPAVT 1471
Query: 136 YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRP 171
E + A+SS P P+ +PT P
Sbjct: 1472 PPSPKEPPAPKQVATSSSPKKAPA-TPAPMGAPTLP 1506
Score = 33.1 bits (74), Expect = 0.64
Identities = 47/186 (25%), Positives = 66/186 (35%), Gaps = 32/186 (17%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRM--SFSGI 82
P SP G P SP AP+ P +P SPK + P +P S G
Sbjct: 1087 PPSPKGG-------PATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139
Query: 83 FRSSSKESSPNSNPATSP---GGIRFFSRSRKTSGLSSSPSTP--TQVTKQHTFPLESYK 137
+ + +P + AT P GG+ T +P+TP T + + S K
Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGL-------ATPPPKGAPTTPAATPPSPKGGLATPSPK 1192
Query: 138 HEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHY------APSKAAALAAAL 191
P A++ P G PS +PT P P+ +P A AA
Sbjct: 1193 GAP-----TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1247
Query: 192 GPAEAG 197
P+ G
Sbjct: 1248 PPSPKG 1253
Score = 32.7 bits (73), Expect = 0.83
Identities = 46/184 (25%), Positives = 62/184 (33%), Gaps = 29/184 (15%)
Query: 24 GPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 83
GP +PS P P SP P P SPK P +PP SP+ G
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATP-----SPKGA-PMPPAATPP-SPK-----GGL 1117
Query: 84 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSP--STPTQVTKQHTFPLESYKHEPE 141
+ + +P + AT P GL++ P PT P P
Sbjct: 1118 ATPPHKGAPTTPAATPPS---------PKGGLATPPPKGAPTTPAATPPSPKGGLATPPP 1168
Query: 142 RLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHY------APSKAAALAAALGPAE 195
+ A++ P G PS +PT P P+ +P A AA P+
Sbjct: 1169 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSP 1228
Query: 196 AGML 199
G L
Sbjct: 1229 KGGL 1232
Score = 32.0 bits (71), Expect = 1.4
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 27/191 (14%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTV-------FPFSYQESPPR----- 72
P SP KG + P+ P+SP P K SP SP +V P + + P +
Sbjct: 1621 PPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTA 1680
Query: 73 ------SPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSG----LSSSPSTP 122
+P S I + K + ATSP S + G ++ +P P
Sbjct: 1681 LKEVLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLP 1740
Query: 123 TQVTKQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPS 182
Q T + H P+ + +S P T ++F+ P ++ APS
Sbjct: 1741 VQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTA-----AAFEKVLPKPESASVSAAPS 1795
Query: 183 KAAALAAALGP 193
+L A P
Sbjct: 1796 PPVSLPLAPSP 1806
Score = 31.6 bits (70), Expect = 1.9
Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 10/143 (6%)
Query: 39 PRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSF--SGIFRSSSKESSPNSNP 96
P P SP AP +P SPK V +E+P S + F G + K++ S
Sbjct: 856 PTPPSPKGAPTPSAVTPLSPKGV-TLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMT 914
Query: 97 ATSPGGIRFFSRSRKTSGLSSSPS---TPTQVTKQHTFPLESYKHEPERLENRIYASSSP 153
++SP R + G+ +SPS PT P + A++ P
Sbjct: 915 SSSPKKAR---ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPP 971
Query: 154 PDTGQRFCPSSFQSPTRPPLASP 176
G PS +PT PP A+P
Sbjct: 972 SPKGGPATPSPKGAPT-PPAATP 993
Score = 30.4 bits (67), Expect = 4.1
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 8/122 (6%)
Query: 91 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYAS 150
SP+ PA +P G + TS L+ S+P + + + + + Y +
Sbjct: 736 SPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSK----GTLTYLA 791
Query: 151 SSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEAGMLEKLEFEDEAVE 210
SP G P + + PT+ A P + L++ + P EA L + + +
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKKGSAGP----DTPIGNLSSPVSPVEASFLPENSLSFQGSK 847
Query: 211 DS 212
DS
Sbjct: 848 DS 849
>gi|146198654 zinc finger protein 768 [Homo sapiens]
Length = 540
Score = 44.7 bits (104), Expect = 2e-04
Identities = 62/211 (29%), Positives = 77/211 (36%), Gaps = 27/211 (12%)
Query: 9 EGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQE 68
EGSG + ++ PFG S GF + P+ P SP P P SP V P E
Sbjct: 44 EGSGDYEVEEI--PFGLEPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPP--SPE 99
Query: 69 SPPRSPRRMSFSGIFRSSS---KESSPNSNPAT------SPGGIRFFSR--SRKTSGLSS 117
PRSP S S F S S + SP P + SPG SR S+ T +
Sbjct: 100 FAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKTQ 159
Query: 118 SPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD----------TGQRFCPSSFQS 167
SP Q +K E + E+ I P D TG F+
Sbjct: 160 SPEFEAQSSKFQE-GAEMLLNPEEKSPLNISVGVHPLDSFTQGFGEQPTGDLPIGPPFEM 218
Query: 168 PTRPPLASPTHYAPSKAAALAAAL-GPAEAG 197
PT L++P L AL GP G
Sbjct: 219 PTGALLSTPQFEMLQNPLGLTGALRGPGRRG 249
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 43.9 bits (102), Expect = 4e-04
Identities = 49/199 (24%), Positives = 70/199 (35%), Gaps = 42/199 (21%)
Query: 8 LEGSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQ 67
L+GS +S+KV P GPGSP + + + PV PK P
Sbjct: 1239 LQGSPTPTSKKVPLP-GPGSP---------EVKRAHGTPPPVSPKPPP------------ 1276
Query: 68 ESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTK 127
PP +P+ + S S SP +PA P + L+ P TP +
Sbjct: 1277 --PPTAPKPVKAVAGLPSGSAGPSPAPSPARQP-----------PAALAKPPGTPPSLGA 1323
Query: 128 QHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAAL 187
P P ++ + PP ++ P P ASP A K
Sbjct: 1324 SPAKP-------PSPGAPALHVPAKPPRAAAAAAAAAAAPPAPPEGASPGDSARQKLEET 1376
Query: 188 AAALGPAEAGMLEKLEFED 206
+A L A + EK+ ED
Sbjct: 1377 SACLAAALQAVEEKIRQED 1395
Score = 32.3 bits (72), Expect = 1.1
Identities = 46/173 (26%), Positives = 64/173 (36%), Gaps = 39/173 (22%)
Query: 37 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKES------ 90
P P P P +P SP T Q SP + +++ G K +
Sbjct: 1210 PLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHGTPPP 1269
Query: 91 -SPN-SNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIY 148
SP P T+P + + +GL S + P+ P S +P
Sbjct: 1270 VSPKPPPPPTAPKPV------KAVAGLPSGSAGPS--------PAPSPARQPPA------ 1309
Query: 149 ASSSPPDTGQRFCPSSFQSPTRPPL-ASPTHYAPSK------AAALAAALGPA 194
A + PP T PS SP +PP +P + P+K AAA AAA PA
Sbjct: 1310 ALAKPPGTP----PSLGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAPPA 1358
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 82
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 540 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 599
Query: 83 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 142
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 600 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 659
Query: 143 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 177
+ +P T G S +PT P +PT
Sbjct: 660 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 695
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 375 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 431
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 432 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 486
Query: 135 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 185
K P E A ++P P T + P++ + PT P P AA
Sbjct: 487 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 539
Score = 35.8 bits (81), Expect = 0.099
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPPRSPRR 76
P +P + + +P P++ SAP PK ++P +PK P + +E P +P+
Sbjct: 218 PTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 277
Query: 77 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY 136
+ +++KE +P + ++S T+ +P+TP + T P E
Sbjct: 278 PA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TTPKEPA 318
Query: 137 KHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 185
P+ P T + P++ + +PT P +PT AP K A
Sbjct: 319 PTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 357
Score = 35.8 bits (81), Expect = 0.099
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 76
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 508 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 567
Query: 77 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 131
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 568 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 627
Query: 132 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 182
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 628 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 671
Score = 34.3 bits (77), Expect = 0.29
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 83
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 311 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 365
Query: 84 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 143
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 366 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 421
Query: 144 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 177
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 422 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 461
Score = 29.3 bits (64), Expect = 9.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 34 SRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPN 93
S+ P+P P AP +P TS PKT+ ++ P +PR+M+ S+ E +P
Sbjct: 880 SKATTPKPQKPTKAPKKP-TSTKKPKTMPRVRKPKTTP-TPRKMT------STMPELNPT 931
Query: 94 SNPA 97
S A
Sbjct: 932 SRIA 935
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 82
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 581 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 640
Query: 83 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 142
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 641 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 700
Query: 143 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 177
+ +P T G S +PT P +PT
Sbjct: 701 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 736
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 416 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 472
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 473 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 527
Query: 135 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 185
K P E A ++P P T + P++ + PT P P AA
Sbjct: 528 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 580
Score = 35.8 bits (81), Expect = 0.099
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPPRSPRR 76
P +P + + +P P++ SAP PK ++P +PK P + +E P +P+
Sbjct: 259 PTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 318
Query: 77 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY 136
+ +++KE +P + ++S T+ +P+TP + T P E
Sbjct: 319 PA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TTPKEPA 359
Query: 137 KHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 185
P+ P T + P++ + +PT P +PT AP K A
Sbjct: 360 PTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 398
Score = 35.8 bits (81), Expect = 0.099
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 76
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 549 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 608
Query: 77 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 131
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 609 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 668
Query: 132 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 182
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 669 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 712
Score = 34.3 bits (77), Expect = 0.29
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 83
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 352 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 406
Query: 84 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 143
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 407 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 462
Query: 144 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 177
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 463 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 502
Score = 29.3 bits (64), Expect = 9.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 34 SRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPN 93
S+ P+P P AP +P TS PKT+ ++ P +PR+M+ S+ E +P
Sbjct: 921 SKATTPKPQKPTKAPKKP-TSTKKPKTMPRVRKPKTTP-TPRKMT------STMPELNPT 972
Query: 94 SNPA 97
S A
Sbjct: 973 SRIA 976
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 82
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 633 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 692
Query: 83 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 142
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 693 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 752
Query: 143 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 177
+ +P T G S +PT P +PT
Sbjct: 753 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 788
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 468 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 524
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 525 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 579
Query: 135 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 185
K P E A ++P P T + P++ + PT P P AA
Sbjct: 580 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 632
Score = 35.8 bits (81), Expect = 0.099
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPPRSPRR 76
P +P + + +P P++ SAP PK ++P +PK P + +E P +P+
Sbjct: 311 PTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 370
Query: 77 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY 136
+ +++KE +P + ++S T+ +P+TP + T P E
Sbjct: 371 PA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TTPKEPA 411
Query: 137 KHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 185
P+ P T + P++ + +PT P +PT AP K A
Sbjct: 412 PTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 450
Score = 35.8 bits (81), Expect = 0.099
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 76
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 601 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 660
Query: 77 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 131
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 720
Query: 132 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 182
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 721 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 764
Score = 34.3 bits (77), Expect = 0.29
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 83
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 404 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 458
Query: 84 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 143
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 459 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 514
Query: 144 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 177
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 515 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 554
Score = 29.3 bits (64), Expect = 9.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 34 SRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPN 93
S+ P+P P AP +P TS PKT+ ++ P +PR+M+ S+ E +P
Sbjct: 973 SKATTPKPQKPTKAPKKP-TSTKKPKTMPRVRKPKTTP-TPRKMT------STMPELNPT 1024
Query: 94 SNPA 97
S A
Sbjct: 1025 SRIA 1028
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 43.9 bits (102), Expect = 4e-04
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPK-TSPGSPKTVFPFSYQESPPRSPRRMSFSGI 82
P +P + + +P P++P AP PK T+P +PK P + +E P +P++ + +
Sbjct: 674 PNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKEL 733
Query: 83 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 142
+++KE + + +P + + + ++P P T + T P + P
Sbjct: 734 APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTT 793
Query: 143 LENRIYASSSPPDT-GQRFCPSSFQSPTRPPLASPT 177
+ +P T G S +PT P +PT
Sbjct: 794 PKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPT 829
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 14/175 (8%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
++ K SP P P+ P ++ AP K++P +PK P + +E P +P
Sbjct: 509 TTTKEPSPTTPKEPAPTTTKSAPT---TTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTP 565
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
+ + ++ K+ +P + +P + + + ++P P T + T P
Sbjct: 566 KEPA-----PTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 620
Query: 135 SYKHEPERLENRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 185
K P E A ++P P T + P++ + PT P P AA
Sbjct: 621 PKKLTPTTPEK--LAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAA 673
Score = 35.8 bits (81), Expect = 0.099
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 39/170 (22%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPK--------TSPGSPKTVFPFSYQESPPRSPRR 76
P +P + + +P P++ SAP PK ++P +PK P + +E P +P+
Sbjct: 352 PTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKE 411
Query: 77 MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESY 136
+ +++KE +P + ++S T+ +P+TP + T P E
Sbjct: 412 PA-----PTTTKEPAPTT------------TKSAPTTPKEPAPTTPKKPAP--TTPKEPA 452
Query: 137 KHEPERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 185
P+ P T + P++ + +PT P +PT AP K A
Sbjct: 453 PTTPK---------EPTPTTPKEPAPTTKEPAPTTPKEPAPT--APKKPA 491
Score = 35.8 bits (81), Expect = 0.099
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 24/173 (13%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTS-PGSPKTVFPFSYQESPPRSPRR------ 76
P +P + + +P P++P AP PK + P +PK P + +E P +P+
Sbjct: 642 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Query: 77 -----MSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTF 131
+ G ++ KE +P + +P + + TS P+ T T
Sbjct: 702 KETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTT 761
Query: 132 PLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQ--SPTRPPLASPTHYAPS 182
P E P+ P T + P++ + +PT P +P AP+
Sbjct: 762 PKEPAPTTPK---------EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPT 805
Score = 34.3 bits (77), Expect = 0.29
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMS-APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIF 83
P +P + + +P P++P AP + +P +PK P + ++ P +P+ +
Sbjct: 445 PTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPA----- 499
Query: 84 RSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERL 143
++ KE +P + SP + + S+P+T + T + EP
Sbjct: 500 PTTPKEPAPTTTKEPSP----TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPT 555
Query: 144 ENRIYASSSP----PDTGQRFCPSSFQ--SPTRPPLASPT 177
+ A ++P P T ++ P++ + +PT P +PT
Sbjct: 556 TTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPT 595
Score = 29.3 bits (64), Expect = 9.2
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 34 SRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPN 93
S+ P+P P AP +P TS PKT+ ++ P +PR+M+ S+ E +P
Sbjct: 1014 SKATTPKPQKPTKAPKKP-TSTKKPKTMPRVRKPKTTP-TPRKMT------STMPELNPT 1065
Query: 94 SNPA 97
S A
Sbjct: 1066 SRIA 1069
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 43.9 bits (102), Expect = 4e-04
Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 17/192 (8%)
Query: 12 GKHSSRKVDSP---FGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQE 68
G + RKV P +P + P P P P+ +P P SP Q
Sbjct: 529 GSSAGRKVSCAPPSMQPPAPPAELAAPLPSPLPEQPLDSPAAPALSPSG------LGLQP 582
Query: 69 SPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQ 128
P R+ S + S+++ SP S+ T+ G + ++ G S SPS P
Sbjct: 583 GPERTSTTKS-KELSPGSAQKGSPGSSQGTACAGTQPGAQPGAQPGASPSPSQPPADQSP 641
Query: 129 HTFPLESYKHE--PERLENRIYASSSPPDTGQRFCPSSFQ-SPTRPPLASPTHYAPSKAA 185
HT S K P ++ + + GQ PS SPT P SP + +
Sbjct: 642 HTLRKVSKKLAPIPPKVPFGQPGAMADQSAGQ---PSPVSLSPTPPSTPSPYGLSYPQGY 698
Query: 186 ALAAA-LGPAEA 196
+LA+ L PA A
Sbjct: 699 SLASGQLSPAAA 710
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 43.5 bits (101), Expect = 5e-04
Identities = 50/176 (28%), Positives = 68/176 (38%), Gaps = 30/176 (17%)
Query: 16 SRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPR 75
+R+ SP P P + + P PR +P P R SP Y SPP P+
Sbjct: 555 TRRRRSP-SPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPP--PK 611
Query: 76 RMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRS------------RKTSGLSS---SPS 120
R R++S P + SP R S S R++ LSS S
Sbjct: 612 R-------RTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGS 664
Query: 121 TPTQVTKQHTFPLESYKHEPERLENRIYASSSPPDT--GQRFCPSSFQSP---TRP 171
+P++ T++ P + +H P SSSPP G P QSP TRP
Sbjct: 665 SPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRP 720
Score = 35.4 bits (80), Expect = 0.13
Identities = 47/166 (28%), Positives = 61/166 (36%), Gaps = 23/166 (13%)
Query: 37 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNP 96
P+ RPS P P+ P P+ SP R RR S S SSS SS + +P
Sbjct: 317 PRRRPSPRRRTP--PRRMPPPPR----HRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSP 370
Query: 97 ATSPGGIRFFSRSRKTSGLS------------SSPSTPTQVTKQHTFPLESYKHEPERLE 144
P R S RKT LS S P+TP T+ P +S + R+
Sbjct: 371 PKKPPK-RTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVS 429
Query: 145 NRIYASSSP----PDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAA 186
+S T +R PS P + L+ K AA
Sbjct: 430 VSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAA 475
Score = 35.0 bits (79), Expect = 0.17
Identities = 42/163 (25%), Positives = 60/163 (36%), Gaps = 15/163 (9%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 84
P P K S P P+ S P + ++SP + + S + SP R +
Sbjct: 617 PPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSP 676
Query: 85 SSSKESSPNSNP-----ATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHE 139
+K SP+ P ++SP +R G SSSP Q T P+
Sbjct: 677 QPNKRHSPSPRPRAPQTSSSPPPVR--------RGASSSPQR-RQSPSPSTRPIRRVSRT 727
Query: 140 PERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPS 182
PE + + AS SP +R S S + P A PS
Sbjct: 728 PEPKKIKKAASPSPQSV-RRVSSSRSVSGSPEPAAKKPPAPPS 769
Score = 30.0 bits (66), Expect = 5.4
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 21/156 (13%)
Query: 11 SGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESP 70
S SS + SP P P K S + R SP ++P R + P P T P +
Sbjct: 359 SSSSSSSRSRSP--PKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPT 416
Query: 71 PRSPRRMSFSGIF----RSSSK-------ESSPNSNPATSPGGIRFFSRSRKTSGLSSSP 119
P+ R S + R+S K E + +PA P + S S + G +
Sbjct: 417 PQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVE-LSESEEDKGGKMAA 475
Query: 120 STPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD 155
+ Q +Q Y+ + ++ + +SSS D
Sbjct: 476 ADSVQQRRQ-------YRRQNQQSSSDSGSSSSSED 504
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 43.1 bits (100), Expect = 6e-04
Identities = 50/182 (27%), Positives = 68/182 (37%), Gaps = 18/182 (9%)
Query: 14 HSSRKVD-SPFGPGSPSKGFFSRGPQPRPSSPMS-APVRP-KTSPGSPKTVFPFSYQESP 70
H SR ++ SP P P + S P+ P SP+ +P+ P + SP SP P S P
Sbjct: 484 HLSRPLEESPLSP-PPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLS----P 538
Query: 71 PRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLS----SSPSTPTQVT 126
P P S F S P P + P S + S +S SP +P
Sbjct: 539 P--PEASPLSPPFEESPLSPPPEELPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEA 596
Query: 127 KQHTFPLESYKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAA 186
+ P E P E+ + SPP R P SP PP P + +
Sbjct: 597 SRLFPPFEESPLSPPPEESPL----SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSR 652
Query: 187 LA 188
L+
Sbjct: 653 LS 654
Score = 39.3 bits (90), Expect = 0.009
Identities = 45/144 (31%), Positives = 57/144 (39%), Gaps = 17/144 (11%)
Query: 34 SRGPQPRPSSPMSAPVRPKTSPGSP----KTVFPFSYQESPPRSPRRMS-FSGIFRSSSK 88
SR P SPMS P P+ SP SP +FP ++ESP P S S +S
Sbjct: 570 SRLSPPPEESPMSPP--PEESPMSPPPEASRLFP-PFEESPLSPPPEESPLSPPPEASRL 626
Query: 89 ESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIY 148
P +P + P S + S LS P V + + P E P E+
Sbjct: 627 SPPPEDSPMSPPPEESPMSPPPEVSRLS-----PLPVVSRLSPPPEESPLSPPPEES--- 678
Query: 149 ASSSPPDTGQRFCPSSFQSPTRPP 172
+SPP R P SPT PP
Sbjct: 679 -PTSPPPEASRLSPPPEDSPTSPP 701
Score = 35.0 bits (79), Expect = 0.17
Identities = 48/172 (27%), Positives = 62/172 (36%), Gaps = 31/172 (18%)
Query: 20 DSPFGPGSPSKGFFSRGPQPRPSSPMSAPV---RP-KTSPGSPKTVFPFSYQESPPRSPR 75
+SP P P S P+ P+SP+ + RP + SP SP P SPP P
Sbjct: 455 ESPTSP-PPEASRLSPPPEELPASPLPEALHLSRPLEESPLSPP---PEESPLSPP--PE 508
Query: 76 RMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 135
FS + E SP S P SP S +P +P + P E
Sbjct: 509 SSPFSPL------EESPLSPPEESP-----------PSPALETPLSPPPEASPLSPPFEE 551
Query: 136 YKHEPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAAAL 187
P E +SPP R P +SP PP P +A+ L
Sbjct: 552 SPLSPPPEE----LPTSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRL 599
Score = 32.0 bits (71), Expect = 1.4
Identities = 48/197 (24%), Positives = 70/197 (35%), Gaps = 41/197 (20%)
Query: 27 SPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTV-FPFSYQESPPR---SPRRMSFSGI 82
SPS G G + + AP+ P+ S P++ QE PP +P S I
Sbjct: 2309 SPSSGTHLGGLELKTPDVFKAPLTPRASQVEPQSPGLGLRPQEPPPAQALAPSPPSHPDI 2368
Query: 83 FRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPER 142
FR S + P + P +P P + P + + P
Sbjct: 2369 FRPGS-YTDPYAQPPLTPRP-------------QPPPPESCCALPPRSLPSDPFSRVPAS 2414
Query: 143 LENRIYASSSP----PDTGQRFCPS----SFQSP---TRP-----------PLASPTHYA 180
+++ +S SP P + + FCPS FQSP +RP PL P
Sbjct: 2415 PQSQ-SSSQSPLTPRPLSAEAFCPSPVTPRFQSPDPYSRPPSRPQSRDPFAPLHKPPRPQ 2473
Query: 181 PSKAAALAAALGPAEAG 197
P + A A +L G
Sbjct: 2474 PPEVAFKAGSLAHTSLG 2490
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 42.7 bits (99), Expect = 8e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 38 QPRPSSPMSAP-VRPKTSPGSPKTVFPFSYQESPPRS-PRRMSFSGIFRSSS-----KES 90
QP P +P++ P ++P + P+ P +++ P S P S +
Sbjct: 362 QPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 421
Query: 91 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE------ 144
S + P+ P ++ +S+ L SSP+ P +T+ P H P L
Sbjct: 422 STHHPPSAHPPPLQLMPQSQP---LPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 478
Query: 145 ---NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP--SKAAALAAALGPAEAGML 199
+ PP CPS+ + PP T P S AAA ++ + L
Sbjct: 479 PFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPL 534
Query: 200 EKLEFEDEAVEDSE 213
++ ++EA++D+E
Sbjct: 535 PTVQIKEEALDDAE 548
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.7 bits (99), Expect = 8e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 38 QPRPSSPMSAP-VRPKTSPGSPKTVFPFSYQESPPRS-PRRMSFSGIFRSSS-----KES 90
QP P +P++ P ++P + P+ P +++ P S P S +
Sbjct: 916 QPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 975
Query: 91 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE------ 144
S + P+ P ++ +S+ L SSP+ P +T+ P H P L
Sbjct: 976 STHHPPSAHPPPLQLMPQSQP---LPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 145 ---NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP--SKAAALAAALGPAEAGML 199
+ PP CPS+ + PP T P S AAA ++ + L
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPL 1088
Query: 200 EKLEFEDEAVEDSE 213
++ ++EA++D+E
Sbjct: 1089 PTVQIKEEALDDAE 1102
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 42.7 bits (99), Expect = 8e-04
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 38 QPRPSSPMSAP-VRPKTSPGSPKTVFPFSYQESPPRS-PRRMSFSGIFRSSS-----KES 90
QP P +P++ P ++P + P+ P +++ P S P S +
Sbjct: 916 QPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSL 975
Query: 91 SPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE------ 144
S + P+ P ++ +S+ L SSP+ P +T+ P H P L
Sbjct: 976 STHHPPSAHPPPLQLMPQSQP---LPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 145 ---NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP--SKAAALAAALGPAEAGML 199
+ PP CPS+ + PP T P S AAA ++ + L
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPST----STPPAGPGTSAQPPCSGAAASGGSIAGGSSCPL 1088
Query: 200 EKLEFEDEAVEDSE 213
++ ++EA++D+E
Sbjct: 1089 PTVQIKEEALDDAE 1102
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 42.0 bits (97), Expect = 0.001
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 27 SPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSS 86
+PS+G S+G + S+ ++P + TS GSP V P S R S + + S
Sbjct: 652 NPSQGSPSQGSLRQESTSQASPSQRSTSQGSPSQVNP---------SQRSTSHANSSQGS 702
Query: 87 SKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENR 146
+ SP+ + + R T G+ + S+P H+FP P L +
Sbjct: 703 PSQGSPSQESPSQGSTSQASPSHRNTIGVIGTTSSPKATGSTHSFP-PGATDGPLALPGQ 761
Query: 147 IYASSSPPDTGQRFCPSSFQSPTRPP 172
+ +S P S+ SPT P
Sbjct: 762 LQGNSIME-------PPSWPSPTEDP 780
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/168 (26%), Positives = 67/168 (39%), Gaps = 15/168 (8%)
Query: 38 QPRPSSPMSAPVRPKTSPGSPKT--VFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSN 95
+P +SP P R + GSP T + S SP +P R S +G ++S P
Sbjct: 352 KPSTASPTGTPSRASPT-GSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTRKP--- 407
Query: 96 PATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD 155
P SP G+ + K +S TP + + T P S P R +SP
Sbjct: 408 PRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSR--------ASPTG 459
Query: 156 TGQRFCPSSFQSPTRPPLASPTHYAPSKAAALAAALGPAEAGMLEKLE 203
T P+ S T P SP+ +P+ + + A+ L K+E
Sbjct: 460 TQSTASPTGSPS-TASPTGSPSTASPTGSPSRASLTRTPSRASLTKME 506
Score = 32.3 bits (72), Expect = 1.1
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 28/160 (17%)
Query: 26 GSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRS 85
GSPS+ +R P R S + T+P + S R+P + + + S
Sbjct: 540 GSPSRAALTRTPS-RASLTRTPSRASLTTPS----------RASLTRTPSTVLLTRMPPS 588
Query: 86 SSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 145
+S P+ TSP G+ + K +S TP + + T P S P R
Sbjct: 589 ASPTGMPSR---TSPTGMPSSALLTKMDSTASITRTPPRASPTETPPRASPTGTPPR--- 642
Query: 146 RIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAPSKAA 185
+SP T R P+ PP ASPT PS+A+
Sbjct: 643 -----ASPTGTPPRASPTG-----TPPRASPTG-TPSRAS 671
Score = 31.2 bits (69), Expect = 2.4
Identities = 38/150 (25%), Positives = 55/150 (36%), Gaps = 14/150 (9%)
Query: 39 PRPSSPMSAPVRPKTSP-GSPKTVFPFSYQE--SPPRSPRRMSFSGIFRSSSKESSPNSN 95
P +SP P P+ SP G+P P Q SP SP S +G ++S SP+
Sbjct: 434 PPRASPTGTP--PRASPTGTPSRASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRA 491
Query: 96 PATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLENRIYASSSPPD 155
T ++ T+ ++ +PS + T P + A SP
Sbjct: 492 SLTRTPSRASLTKMESTASITRTPSRASPTWTPST-------ASPTGSPSTALAMGSPSR 544
Query: 156 TGQRFCPSSFQSPTRPPLASPTHYAPSKAA 185
PS P AS T PS+A+
Sbjct: 545 AALTRTPSRASLTRTPSRASLT--TPSRAS 572
Score = 30.8 bits (68), Expect = 3.2
Identities = 42/152 (27%), Positives = 60/152 (39%), Gaps = 12/152 (7%)
Query: 28 PSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSY--QESPPRSPRRMSFSGIFRS 85
PS +R P +S + P R S +P T + + S R+P R S + +
Sbjct: 116 PSTASLTRSPSR--ASLTTTPSRASLSM-TPSTAAALTMPSRASLTRTPPRASLTMTPST 172
Query: 86 SSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 145
+S +P P SP G+ SR+ T S++ T T T L + P
Sbjct: 173 ASLTRTP---PRASPTGMP--SRTSPTGMPSTASLTKMDSTASITRTLS--RASPTGTPP 225
Query: 146 RIYASSSPPDTGQRFCPSSFQSPTRPPLASPT 177
R + SPP PS+ PP ASPT
Sbjct: 226 RASPTGSPPRASLSMMPSTALLIRTPPRASPT 257
Score = 30.0 bits (66), Expect = 5.4
Identities = 43/164 (26%), Positives = 58/164 (35%), Gaps = 14/164 (8%)
Query: 26 GSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPK-----TVFPFSYQESPPRSP--RRMS 78
G+PS+ S P +S M P R + P+ T S SP R+ R S
Sbjct: 24 GTPSRA--SLTGTPSTASLMGTPSRASLTGTPPRASLKGTTSMASLMVSPSRASLTRMQS 81
Query: 79 FSGIFRSSSKESSPNSNPATSPGGI---RFFSRSRKTSGLSSSPSTPTQVTKQHTFPLES 135
S + R+ S S P S R T+ L+ SPS + T L
Sbjct: 82 SSLLTRTPSMASLKRMPPRASRTRTLPRASLMRRPSTASLTRSPSRASLTTTPSRASLSM 141
Query: 136 YKHEPERLE--NRIYASSSPPDTGQRFCPSSFQSPTRPPLASPT 177
L +R + +PP PS+ PP ASPT
Sbjct: 142 TPSTAAALTMPSRASLTRTPPRASLTMTPSTASLTRTPPRASPT 185
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 37 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQES-PPRSPRRMSFSGIFRSSSKESSPNSN 95
P PRP P S P P+T+ S +V P E PP +P G+ S +K S +
Sbjct: 1283 PPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHTP------GLCGSLAKSQSTETV 1336
Query: 96 PATSPGGIRFFSRSRKTSGLS-SSPSTP 122
PAT PGG S +SGLS SSP P
Sbjct: 1337 PAT-PGGEPPLSGG--SSGLSLSSPQVP 1361
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.2 bits (95), Expect = 0.002
Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 19/196 (9%)
Query: 10 GSGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQES 69
GS SS V + G S P P P S P S G+ + P +
Sbjct: 2471 GSQSLSSGAVATTTSSAGDHNGMLS---VPAPGVPHSDVGEPPASTGAQQ---PSALAAL 2524
Query: 70 PPRSPRRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQH 129
P RR S S SSS SS +S+ ++S G S S + G SS P P K+
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSG----SSSSDSEG-SSLPVQPEVALKRV 2579
Query: 130 TFPLESYKH--------EPERLENRIYASSSPPDTGQRFCPSSFQSPTRPPLASPTHYAP 181
P + K EP + + +SSS + SS S + +S + +
Sbjct: 2580 PSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2639
Query: 182 SKAAALAAALGPAEAG 197
S +++ +++ PA+ G
Sbjct: 2640 SSSSSSSSSPSPAKPG 2655
Score = 40.4 bits (93), Expect = 0.004
Identities = 50/179 (27%), Positives = 71/179 (39%), Gaps = 41/179 (22%)
Query: 2 PLLDGDLEGSGKHSSRKVDSPFG------PGSPSKGFFSR---GPQPRPSSPMS------ 46
P D D + K ++R SP P +P+ R PQP ++P+S
Sbjct: 334 PYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNP 393
Query: 47 ----APVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSPNSNPATSPGG 102
+P R ++ P SP+ + S ES P SP+ S +SS SP PA +PG
Sbjct: 394 PSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSR--HASSSPESP--KPAPAPGS 449
Query: 103 IRFFSRSRKTSGLSSSPSTPTQVTKQHTFPL--ESYKHEPERLENRIYASSSPPDTGQR 159
R S S+PT + H +S+ H P R R S P T +R
Sbjct: 450 HREIS------------SSPTSKNRSHGRAKRDKSHSHTPSRRMGR----SRSPATAKR 492
Score = 38.9 bits (89), Expect = 0.012
Identities = 45/155 (29%), Positives = 60/155 (38%), Gaps = 11/155 (7%)
Query: 11 SGKHSSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTS---PGSPKTVFPFSYQ 67
S SS S S S S G S S PV+P+ + SP + +
Sbjct: 2532 SSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVR 2591
Query: 68 ESPPRSP------RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPST 121
E P P RR S S SSS SS +S+ ++S S S +S SSSPS
Sbjct: 2592 EGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS- 2650
Query: 122 PTQVTKQHTFPLESYKHEPERLENRIYASSSPPDT 156
P + Q P + +P E R + P D+
Sbjct: 2651 PAKPGPQ-ALPKPASPKKPPPGERRSRSPRKPIDS 2684
Score = 37.7 bits (86), Expect = 0.026
Identities = 49/161 (30%), Positives = 68/161 (42%), Gaps = 18/161 (11%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
SS +VDS SP + P+ + P +AP S SP+ P PR+
Sbjct: 1581 SSPEVDSK-SRLSPRRSRSGSSPEVK-DKPRAAPRAQSGSDSSPEPKAP------APRAL 1632
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
R S SG SSSK P+ ++S +T+ S S+P TK T P
Sbjct: 1633 PRRSRSG---SSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSR-SSPEPKTKSRTPPRR 1688
Query: 135 -SYKHEPE-----RLENRIYASSSPPDTGQRFCPSSFQSPT 169
S + PE RL R ++SS P+T R P +SP+
Sbjct: 1689 RSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPS 1729
Score = 36.2 bits (82), Expect = 0.075
Identities = 41/158 (25%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 25 PGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFR 84
P +PS+G P P + P SP SP+ + +P+R R
Sbjct: 1470 PRTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPEL-------NNKCLTPQRE------R 1516
Query: 85 SSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLE 144
S S+ S A +P G R SRS + L PS Q + +S L
Sbjct: 1517 SGSESSVDQKTVARTPLGQR--SRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLR 1574
Query: 145 NRIYASSSPP-DTGQRFCPSSFQSPTRPPLASPTHYAP 181
R + SSP D+ R P +S + P + AP
Sbjct: 1575 QRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAP 1612
Score = 33.5 bits (75), Expect = 0.49
Identities = 42/136 (30%), Positives = 55/136 (40%), Gaps = 31/136 (22%)
Query: 26 GSPSKGFFSRGPQPRPSSPM-SAPVRPKTSP----GSPKTVFPFSYQESPPRSPRRMSFS 80
GS SKG RGP P SS S+P P S GS + P + +PPR
Sbjct: 1639 GSSSKG---RGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPR-------- 1687
Query: 81 GIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEP 140
R SS+ +SP R SR++ SSSP T ++ +H EP
Sbjct: 1688 ---RRSSR---------SSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEP 1735
Query: 141 ---ERLENRIYASSSP 153
R R ++SSP
Sbjct: 1736 AEKSRSSRRRRSASSP 1751
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 40.0 bits (92), Expect = 0.005
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 32 FFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESS 91
+ SR PRPSSP+S P P + P+++ PRSPR S RS S+ S
Sbjct: 2 YMSRLSLPRPSSPLSWPPPPPRASSLPRSL---------PRSPRLCS-----RSRSRSRS 47
Query: 92 PNSNPATSPGGIRFFSRSRKTSGLSSSPSTPT 123
+ + S +R SRSR + SS PS P+
Sbjct: 48 RSRRRSRSLRWLRRRSRSR-SRPFSSGPSGPS 78
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 40.0 bits (92), Expect = 0.005
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 32 FFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESS 91
+ SR PRPSSP+S P P + P+++ PRSPR S RS S+ S
Sbjct: 2 YMSRLSLPRPSSPLSWPPPPPRASSLPRSL---------PRSPRLCS-----RSRSRSRS 47
Query: 92 PNSNPATSPGGIRFFSRSRKTSGLSSSPSTPT 123
+ + S +R SRSR + SS PS P+
Sbjct: 48 RSRRRSRSLRWLRRRSRSR-SRPFSSGPSGPS 78
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 40.0 bits (92), Expect = 0.005
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 32 FFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESS 91
+ SR PRPSSP+S P P + P+++ PRSPR S RS S+ S
Sbjct: 2 YMSRLSLPRPSSPLSWPPPPPRASSLPRSL---------PRSPRLCS-----RSRSRSRS 47
Query: 92 PNSNPATSPGGIRFFSRSRKTSGLSSSPSTPT 123
+ + S +R SRSR + SS PS P+
Sbjct: 48 RSRRRSRSLRWLRRRSRSR-SRPFSSGPSGPS 78
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 40.0 bits (92), Expect = 0.005
Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 9/143 (6%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
SS +P G S SR PQ SS +RPK S G+ S S
Sbjct: 649 SSSSPSTPSGLSSVPSSPMSRKPQKLKSSKS---LRPKESSGNSTNCQNASSSTSGGSGK 705
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
+R + S + SS SS +S+ + S RK S P P+ VT H+ L
Sbjct: 706 KRKNSSPLLVHSSSSSSSSSSSSHS------MESFRKNCVAHSGPPYPSTVTSSHSIGLN 759
Query: 135 SYKHEPERLENRIYASSSPPDTG 157
++ + R S P TG
Sbjct: 760 CVTNKANAVNVRHDQSGRGPPTG 782
Score = 33.1 bits (74), Expect = 0.64
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 37 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSP---- 92
P P +SP+S + +T+ P + SY + S + S S + +S P
Sbjct: 565 PVPSTTSPISTRIPHRTN-SVPTSQCGVSYLAAATVSTSPVLLSSTCISPNSKSVPAHGT 623
Query: 93 --NSNPATSPGGIRFFS-RSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 145
N+ PA S S +SR+ S SSSPSTP+ ++ + P+ +P++L++
Sbjct: 624 TLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPM---SRKPQKLKS 676
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 40.0 bits (92), Expect = 0.005
Identities = 40/143 (27%), Positives = 54/143 (37%), Gaps = 9/143 (6%)
Query: 15 SSRKVDSPFGPGSPSKGFFSRGPQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSP 74
SS +P G S SR PQ SS +RPK S G+ S S
Sbjct: 649 SSSSPSTPSGLSSVPSSPMSRKPQKLKSSKS---LRPKESSGNSTNCQNASSSTSGGSGK 705
Query: 75 RRMSFSGIFRSSSKESSPNSNPATSPGGIRFFSRSRKTSGLSSSPSTPTQVTKQHTFPLE 134
+R + S + SS SS +S+ + S RK S P P+ VT H+ L
Sbjct: 706 KRKNSSPLLVHSSSSSSSSSSSSHS------MESFRKNCVAHSGPPYPSTVTSSHSIGLN 759
Query: 135 SYKHEPERLENRIYASSSPPDTG 157
++ + R S P TG
Sbjct: 760 CVTNKANAVNVRHDQSGRGPPTG 782
Score = 33.1 bits (74), Expect = 0.64
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 37 PQPRPSSPMSAPVRPKTSPGSPKTVFPFSYQESPPRSPRRMSFSGIFRSSSKESSP---- 92
P P +SP+S + +T+ P + SY + S + S S + +S P
Sbjct: 565 PVPSTTSPISTRIPHRTN-SVPTSQCGVSYLAAATVSTSPVLLSSTCISPNSKSVPAHGT 623
Query: 93 --NSNPATSPGGIRFFS-RSRKTSGLSSSPSTPTQVTKQHTFPLESYKHEPERLEN 145
N+ PA S S +SR+ S SSSPSTP+ ++ + P+ +P++L++
Sbjct: 624 TLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPM---SRKPQKLKS 676
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,886,395
Number of Sequences: 37866
Number of extensions: 1194993
Number of successful extensions: 8154
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 471
Number of HSP's that attempted gapping in prelim test: 6852
Number of HSP's gapped (non-prelim): 1372
length of query: 525
length of database: 18,247,518
effective HSP length: 107
effective length of query: 418
effective length of database: 14,195,856
effective search space: 5933867808
effective search space used: 5933867808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.