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Search of human proteins with 18375609
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
(504 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 993 0.0
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 938 0.0
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 645 0.0
gi|213972566 dachshund 2 isoform b [Homo sapiens] 229 4e-60
gi|16876441 dachshund 2 isoform a [Homo sapiens] 220 3e-57
gi|213972568 dachshund 2 isoform c [Homo sapiens] 203 3e-52
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 81 2e-15
gi|195972866 keratin 10 [Homo sapiens] 79 7e-15
gi|119395750 keratin 1 [Homo sapiens] 78 2e-14
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 78 2e-14
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 78 2e-14
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 78 2e-14
gi|109255251 loricrin [Homo sapiens] 77 3e-14
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 77 3e-14
gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens] 77 4e-14
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 74 4e-13
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 72 1e-12
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 72 1e-12
gi|84570137 homeobox B3 [Homo sapiens] 70 6e-12
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 69 8e-12
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 69 1e-11
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 69 1e-11
gi|55956899 keratin 9 [Homo sapiens] 67 3e-11
gi|109452587 family with sequence similarity 98, member B isofor... 67 4e-11
gi|238859557 regulatory factor X1 [Homo sapiens] 67 5e-11
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 66 6e-11
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 66 6e-11
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 66 6e-11
gi|47132620 keratin 2 [Homo sapiens] 66 8e-11
gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens] 65 1e-10
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 993 bits (2568), Expect = 0.0
Identities = 504/504 (100%), Positives = 504/504 (100%)
Query: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI
Sbjct: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
Query: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Query: 121 GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE
Sbjct: 121 GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
Query: 181 NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP 240
NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP
Sbjct: 181 NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP 240
Query: 241 VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE 300
VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE
Sbjct: 241 VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE 300
Query: 301 NSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDG 360
NSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDG
Sbjct: 301 NSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDG 360
Query: 361 LSSIETLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKN 420
LSSIETLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKN
Sbjct: 361 LSSIETLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKN 420
Query: 421 RAIVQKRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADR 480
RAIVQKRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADR
Sbjct: 421 RAIVQKRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADR 480
Query: 481 SGGRTDAERTIQDGRLYLKTTVMY 504
SGGRTDAERTIQDGRLYLKTTVMY
Sbjct: 481 SGGRTDAERTIQDGRLYLKTTVMY 504
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 938 bits (2425), Expect = 0.0
Identities = 492/558 (88%), Positives = 495/558 (88%), Gaps = 54/558 (9%)
Query: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI
Sbjct: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
Query: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Query: 121 GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE
Sbjct: 121 GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
Query: 181 NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP 240
NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP
Sbjct: 181 NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP 240
Query: 241 VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE 300
VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE
Sbjct: 241 VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE 300
Query: 301 NSHIMPHSVPGLMSPGIIPPTDETPLSTPTA----------------------------- 331
NSHIMPHSVPGLMSPGIIPPT T + A
Sbjct: 301 NSHIMPHSVPGLMSPGIIPPTGLTAAAAAAAAATNAAIAEAMKVKKIKLEAMSNYHASNN 360
Query: 332 -----------RDSLDK--------------LSLTGHGQPLPPGFPSPFLFPDGLSSIET 366
S+D+ LSLTGHGQPLPPGFPSPFLFPDGLSSIET
Sbjct: 361 QHGADSENGDMNSSVDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIET 420
Query: 367 LLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQK 426
LLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQK
Sbjct: 421 LLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQK 480
Query: 427 RLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTD 486
RLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTD
Sbjct: 481 RLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTD 540
Query: 487 AERTIQDGRLYLKTTVMY 504
AERTIQDGRLYLKTTVMY
Sbjct: 541 AERTIQDGRLYLKTTVMY 558
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 645 bits (1663), Expect = 0.0
Identities = 323/331 (97%), Positives = 324/331 (97%)
Query: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI
Sbjct: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
Query: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Query: 121 GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE
Sbjct: 121 GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVE 180
Query: 181 NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP 240
NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP
Sbjct: 181 NTPQNNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITP 240
Query: 241 VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE 300
VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE
Sbjct: 241 VVCNVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPE 300
Query: 301 NSHIMPHSVPGLMSPGIIPPTDETPLSTPTA 331
NSHIMPHSVPGLMSPGIIPPT T + A
Sbjct: 301 NSHIMPHSVPGLMSPGIIPPTGLTAAAAAAA 331
Score = 357 bits (915), Expect = 2e-98
Identities = 194/246 (78%), Positives = 202/246 (82%), Gaps = 22/246 (8%)
Query: 280 TNASSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIP-------------------- 319
++ SS P R + + +N M + GL SP ++P
Sbjct: 462 SSVSSSPARTESSSDRIPVHQNGLSMNQMLMGL-SPNVLPGPKEGDLAGHDMGHESKRMH 520
Query: 320 -PTDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVA 378
DETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVA
Sbjct: 521 IEKDETPLSTPTARDSLDKLSLTGHGQPLPPGFPSPFLFPDGLSSIETLLTNIQGLLKVA 580
Query: 379 IDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL 438
IDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL
Sbjct: 581 IDNARAQEKQVQLEKTELKMDFLRERELRETLEKQLAMEQKNRAIVQKRLKKEKKAKRKL 640
Query: 439 QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLYL 498
QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLYL
Sbjct: 641 QEALEFETKRREQAEQTLKQAASTDSLRVLNDSLTPEIEADRSGGRTDAERTIQDGRLYL 700
Query: 499 KTTVMY 504
KTTVMY
Sbjct: 701 KTTVMY 706
>gi|213972566 dachshund 2 isoform b [Homo sapiens]
Length = 571
Score = 229 bits (584), Expect = 4e-60
Identities = 125/217 (57%), Positives = 148/217 (68%), Gaps = 26/217 (11%)
Query: 148 SSSSSSSSSSSSSSSSCGPLPGKPVYSTP-SPVENTPQ---------------------- 184
S+S S++SS + G +P+YSTP P TP
Sbjct: 4 SASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGRGNT 63
Query: 185 -NNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITPVVC 243
NEC+MVD+ G KVASF ++G ELICLPQ FDLFLKHLVGGLHTVYTKLKRL+I+PVVC
Sbjct: 64 NTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVC 123
Query: 244 NVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNASSRPGRPPKRTQSVTSPENSH 303
VEQVRILRGLGAIQPGVNRCKLI+RKDFETL+ DCTNASSRPGRPPKR+ V EN+
Sbjct: 124 TVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNASSRPGRPPKRSLGVLQ-ENAR 182
Query: 304 IMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSL 340
++ H+VPGL+SPG+I PT T + A L K+ L
Sbjct: 183 LLTHAVPGLLSPGLITPTGITAAAMAEAM-KLQKMKL 218
Score = 202 bits (513), Expect = 8e-52
Identities = 114/201 (56%), Positives = 142/201 (70%), Gaps = 8/201 (3%)
Query: 288 RPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSLTGHGQPL 347
RP +T S TS S S P M + +E P+ P + LDK+ LT GQ L
Sbjct: 373 RPGSQTSSHTSSSVS-----SSPSQMDHHL-ERMEEVPVQIPIMKSPLDKIQLTP-GQAL 425
Query: 348 PPGFPSPFLFPDGLSSIETLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELR 407
P GFP PF+F D LSS+ETLLTNIQGLLKVA+DNAR QEKQ+Q EK EL+++ RERE+R
Sbjct: 426 PAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIR 485
Query: 408 ETLEKQLAMEQKNRAIVQKRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDS-LR 466
E LE+QLA+E ++R +QKRLKKEKK KRKLQEALEFE+KRREQ EQ LKQA ++DS LR
Sbjct: 486 ENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGLR 545
Query: 467 VLNDSLTPEIEADRSGGRTDA 487
+L D+ P+IE + +G D+
Sbjct: 546 MLKDTGIPDIEIENNGTPHDS 566
>gi|16876441 dachshund 2 isoform a [Homo sapiens]
Length = 599
Score = 220 bits (560), Expect = 3e-57
Identities = 125/230 (54%), Positives = 148/230 (64%), Gaps = 39/230 (16%)
Query: 148 SSSSSSSSSSSSSSSSCGPLPGKPVYSTP-SPVENTPQ---------------------- 184
S+S S++SS + G +P+YSTP P TP
Sbjct: 4 SASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMINSFVVNNHSNSAGGGGRGNT 63
Query: 185 -NNECKMVDLRGAKVASFTVEGCELICLPQAFDLFLKHLVGGLHTVYTKLKRLEITPVVC 243
NEC+MVD+ G KVASF ++G ELICLPQ FDLFLKHLVGGLHTVYTKLKRL+I+PVVC
Sbjct: 64 NTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVC 123
Query: 244 NVEQVRILRGLGAIQPGVNRCKLISRKDFETLYNDCTNA-------------SSRPGRPP 290
VEQVRILRGLGAIQPGVNRCKLI+RKDFETL+ DCTNA SSRPGRPP
Sbjct: 124 TVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCTNARRKRQMTRKQAVNSSRPGRPP 183
Query: 291 KRTQSVTSPENSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSL 340
KR+ V EN+ ++ H+VPGL+SPG+I PT T + A L K+ L
Sbjct: 184 KRSLGVLQ-ENARLLTHAVPGLLSPGLITPTGITAAAMAEAM-KLQKMKL 231
Score = 203 bits (517), Expect = 3e-52
Identities = 117/211 (55%), Positives = 146/211 (69%), Gaps = 9/211 (4%)
Query: 288 RPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSLTGHGQPL 347
RP +T S TS S S P M + +E P+ P + LDK+ LT GQ L
Sbjct: 386 RPGSQTSSHTSSSVS-----SSPSQMDHHL-ERMEEVPVQIPIMKSPLDKIQLTP-GQAL 438
Query: 348 PPGFPSPFLFPDGLSSIETLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELR 407
P GFP PF+F D LSS+ETLLTNIQGLLKVA+DNAR QEKQ+Q EK EL+++ RERE+R
Sbjct: 439 PAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIR 498
Query: 408 ETLEKQLAMEQKNRAIVQKRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDS-LR 466
E LE+QLA+E ++R +QKRLKKEKK KRKLQEALEFE+KRREQ EQ LKQA ++DS LR
Sbjct: 499 ENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGLR 558
Query: 467 VLNDSLTPEIEADRSGGRTDAERTIQDGRLY 497
+L D+ P+IE + +G D+ +Q G Y
Sbjct: 559 MLKDTGIPDIEIENNGTPHDS-AAMQGGNYY 588
>gi|213972568 dachshund 2 isoform c [Homo sapiens]
Length = 432
Score = 203 bits (517), Expect = 3e-52
Identities = 117/211 (55%), Positives = 146/211 (69%), Gaps = 9/211 (4%)
Query: 288 RPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSLTGHGQPL 347
RP +T S TS S S P M + +E P+ P + LDK+ LT GQ L
Sbjct: 219 RPGSQTSSHTSSSVS-----SSPSQMDHHL-ERMEEVPVQIPIMKSPLDKIQLTP-GQAL 271
Query: 348 PPGFPSPFLFPDGLSSIETLLTNIQGLLKVAIDNARAQEKQVQLEKTELKMDFLRERELR 407
P GFP PF+F D LSS+ETLLTNIQGLLKVA+DNAR QEKQ+Q EK EL+++ RERE+R
Sbjct: 272 PAGFPGPFIFADSLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIR 331
Query: 408 ETLEKQLAMEQKNRAIVQKRLKKEKKAKRKLQEALEFETKRREQAEQTLKQAASTDS-LR 466
E LE+QLA+E ++R +QKRLKKEKK KRKLQEALEFE+KRREQ EQ LKQA ++DS LR
Sbjct: 332 ENLERQLAVELQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGLR 391
Query: 467 VLNDSLTPEIEADRSGGRTDAERTIQDGRLY 497
+L D+ P+IE + +G D+ +Q G Y
Sbjct: 392 MLKDTGIPDIEIENNGTPHDS-AAMQGGNYY 421
Score = 54.3 bits (129), Expect = 3e-07
Identities = 29/58 (50%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 283 SSRPGRPPKRTQSVTSPENSHIMPHSVPGLMSPGIIPPTDETPLSTPTARDSLDKLSL 340
SSRPGRPPKR+ V EN+ ++ H+VPGL+SPG+I PT T + A L K+ L
Sbjct: 9 SSRPGRPPKRSLGVLQ-ENARLLTHAVPGLLSPGLITPTGITAAAMAEAM-KLQKMKL 64
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 81.3 bits (199), Expect = 2e-15
Identities = 49/117 (41%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
PQ S+ A+SSG +ST SP+ ++ P A+AAAAA + GG
Sbjct: 419 PQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGG 478
Query: 76 GGGGGGSGGG-GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
G G GG+GGG GG SG+GGGGGG GGG GS GGG G + G SS
Sbjct: 479 GSGSGGAGGGSGGGSGSGGGGGGAGGG----------GGGSSGGGSGTAGGHSGLSS 525
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 79.3 bits (194), Expect = 7e-15
Identities = 49/101 (48%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 72 STGGGGGGG-----GSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
S+GGG GGG G G GGGSSG G GGG GGGS+ + ++S G GGG G GG
Sbjct: 482 SSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGG 541
Query: 127 -GVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
G SS ++S G SSS SSSS S SSS GP
Sbjct: 542 YGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGP 582
Score = 70.9 bits (172), Expect = 3e-12
Identities = 41/97 (42%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 72 STGGGGGGGGSGGGG---GSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGV 128
S+GGGG GGGS GGG GSSG G GGG GGG + SGGG G GGG
Sbjct: 458 SSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGS 517
Query: 129 ASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
+S +S+G SS SS SS G
Sbjct: 518 SSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG 554
Score = 65.5 bits (158), Expect = 1e-10
Identities = 38/91 (41%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPI 134
G G GG G GGGS G G GGG GGGS S G GGG G S+GGG +
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGS---------SGGGHGGGHGGSSGGGYGGGSSG 505
Query: 135 NASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
S+G SSS SSS S G
Sbjct: 506 GGSSGGGYGGGSSSGGHGGSSSGGYGGGSSG 536
Score = 57.4 bits (137), Expect = 3e-08
Identities = 42/103 (40%), Positives = 46/103 (44%), Gaps = 15/103 (14%)
Query: 73 TGGGGGGGGSGGGGG--------SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG--GGI 122
+GGGGGGGG GGGGG S G+ GGG GG S + S GS GGG GG
Sbjct: 16 SGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSG-----GSFSRGSSGGGCFGGS 70
Query: 123 SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
S G G + GS SSS S S S S G
Sbjct: 71 SGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFG 113
Score = 48.5 bits (114), Expect = 1e-05
Identities = 29/67 (43%), Positives = 31/67 (46%), Gaps = 11/67 (16%)
Query: 72 STGGGGGGGGSGGG-----------GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
S+GG GG GG GGG GGS G GGG GGGS + G GG GG
Sbjct: 70 SSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGG 129
Query: 121 GISAGGG 127
G G G
Sbjct: 130 GFGGGFG 136
Score = 47.4 bits (111), Expect = 3e-05
Identities = 30/70 (42%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 72 STGGGGGGGGSGGGGGSSGNGGG---------------GGGGGGGSNCNPNLAAASNGSG 116
S+GGG GG SGG GG G GGG GG GGGS + S G G
Sbjct: 61 SSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGG 120
Query: 117 GGGGGISAGG 126
G GGG GG
Sbjct: 121 GFGGGGFGGG 130
Score = 45.4 bits (106), Expect = 1e-04
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 109 AAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
+++ +G GGGGGG GGGV SS I++S GS SS S S S SS C
Sbjct: 12 SSSRSGGGGGGGGCGGGGGV-SSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGC 66
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/85 (35%), Positives = 33/85 (38%), Gaps = 11/85 (12%)
Query: 85 GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
G GSSG GG GGG GG GG GG S+GGG ++ G S
Sbjct: 455 GEGSSGGGGRGGGSFGGGY-----------GGGSSGGGSSGGGHGGGHGGSSGGGYGGGS 503
Query: 145 SSSSSSSSSSSSSSSSSSSCGPLPG 169
S SS SSS G G
Sbjct: 504 SGGGSSGGGYGGGSSSGGHGGSSSG 528
Score = 43.9 bits (102), Expect = 3e-04
Identities = 30/60 (50%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 72 STGGGGGG--GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG--GGISAGGG 127
S G GGG GGS GG G G GG GGG GS + + + GS GGG GG S GGG
Sbjct: 58 SRGSSGGGCFGGSSGGYG--GLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGG 115
Score = 43.5 bits (101), Expect = 4e-04
Identities = 27/78 (34%), Positives = 32/78 (41%)
Query: 88 SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSS 147
SS +GGGGGGGG G + S+ G GGG S+GG S +S G SS
Sbjct: 13 SSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSG 72
Query: 148 SSSSSSSSSSSSSSSSCG 165
S S G
Sbjct: 73 GYGGLGGFGGGSFRGSYG 90
Score = 43.1 bits (100), Expect = 6e-04
Identities = 23/64 (35%), Positives = 28/64 (43%)
Query: 72 STGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
S+ GG GGS GGG G GGG GGG G GG GG+ +G +
Sbjct: 91 SSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTM 150
Query: 132 TPIN 135
+N
Sbjct: 151 QNLN 154
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 17/75 (22%)
Query: 70 VTSTGGGGGGGGSGGG----------------GGSSGNGGGGGGGGGGSNCNPNLAAASN 113
++S+ G GGG S GG GGSSG GG GG GGGS +++
Sbjct: 36 ISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFG 95
Query: 114 GS-GGGGGGISAGGG 127
GS GG GG S GGG
Sbjct: 96 GSYGGSFGGGSFGGG 110
Score = 33.1 bits (74), Expect = 0.61
Identities = 18/58 (31%), Positives = 21/58 (36%)
Query: 108 LAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
L + GGG GG S GGG + S+G SS SS S G
Sbjct: 453 LEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSG 510
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAA 110
GGGG GGG GGG G G G N N LA+
Sbjct: 123 GGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLNDRLAS 159
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 78.2 bits (191), Expect = 2e-14
Identities = 58/155 (37%), Positives = 72/155 (46%), Gaps = 19/155 (12%)
Query: 18 PPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGG 77
P +S S S+S TT S + G SS + + S GGGG
Sbjct: 499 PNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSS------------YGSGGGSYGSGGGGG 546
Query: 78 GGGGSGGGGGSS-GNGGG--GGGGGGGSNCNPNLAAAS----NGSGGGGGGISAGGGVAS 130
GG GS G GGSS G+GGG G GGGGG + + ++S GSGGGGGG S G G
Sbjct: 547 GGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGG 606
Query: 131 STPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
+ + G SSS SS SSS S++ G
Sbjct: 607 GSSGGSIGGRGSSSGGVKSSGGSSSVKFVSTTYSG 641
Score = 70.9 bits (172), Expect = 3e-12
Identities = 49/124 (39%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 57 PEPIASAAAAAATVT---STGGGGGGGGSGG-----GGGS--SGNGGGGGGGGGGSNCNP 106
P S + + T++ S GGGGGG GSGG GGGS SG GGGGG G GS
Sbjct: 499 PNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGS---- 554
Query: 107 NLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
+S GSGGG G GGG S +S+G S SS S SS G
Sbjct: 555 --GGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSSGGS 612
Query: 167 LPGK 170
+ G+
Sbjct: 613 IGGR 616
Score = 57.0 bits (136), Expect = 4e-08
Identities = 31/65 (47%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
S A + GGG GGGG GGGG G GGGG GGGG S G G GGGG
Sbjct: 79 SVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFG-----GFGSGGGGFGGGG 133
Query: 122 ISAGG 126
GG
Sbjct: 134 FGGGG 138
Score = 54.3 bits (129), Expect = 3e-07
Identities = 29/69 (42%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 60 IASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGG-GGGSNCNPNLAAASNGSGGG 118
+ + + + +V GG G G G G GGG G GG GGGG GGG +G GG
Sbjct: 70 LGGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGF 129
Query: 119 GGGISAGGG 127
GGG GGG
Sbjct: 130 GGGGFGGGG 138
Score = 49.7 bits (117), Expect = 6e-06
Identities = 31/82 (37%), Positives = 35/82 (42%), Gaps = 19/82 (23%)
Query: 66 AAATVTSTGGGGGGGGSGGGGGSSGNGGGGG-------------------GGGGGSNCNP 106
+++T S GGGG GGGGGS G GGG G GGG GS
Sbjct: 33 SSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGG 92
Query: 107 NLAAASNGSGGGGGGISAGGGV 128
G GG GGG GGG+
Sbjct: 93 GYGGGGFGGGGFGGGGFGGGGI 114
Score = 48.1 bits (113), Expect = 2e-05
Identities = 30/77 (38%), Positives = 33/77 (42%), Gaps = 26/77 (33%)
Query: 71 TSTGGGGGGGGSGGG---------------------GGSSGNGGGGGGGGGGSNCNPNLA 109
+S GGGGG G+GGG GG G+G GGG GGGG
Sbjct: 47 SSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFG-----G 101
Query: 110 AASNGSGGGGGGISAGG 126
G G GGGGI GG
Sbjct: 102 GGFGGGGFGGGGIGGGG 118
Score = 47.0 bits (110), Expect = 4e-05
Identities = 30/65 (46%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 74 GGGGGG-GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASST 132
G GGGG GG G GGG G GG GG G GG G GGG G + GG+ T
Sbjct: 98 GFGGGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGG-GFGGGGYGGGYGPVCPPGGIQEVT 156
Query: 133 PINAS 137
IN S
Sbjct: 157 -INQS 160
Score = 37.4 bits (85), Expect = 0.032
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 20/75 (26%)
Query: 69 TVTSTGGGGGGGGSGGGGGSSGNGGGG--GGGGGGSNCNPNLAAASN------------- 113
T +ST GGGGG S G GGG GGG GS NL + +
Sbjct: 32 TSSSTRRSGGGGGRFS---SCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGS 88
Query: 114 --GSGGGGGGISAGG 126
G G GGGG GG
Sbjct: 89 GFGGGYGGGGFGGGG 103
Score = 35.4 bits (80), Expect = 0.12
Identities = 31/93 (33%), Positives = 36/93 (38%), Gaps = 24/93 (25%)
Query: 73 TGGGGGGGGSGGGGG---------SSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGIS 123
+G GGG S G G SS GGGGG S+C GGGG S
Sbjct: 9 SGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSC-------------GGGGGS 55
Query: 124 --AGGGVASSTPINASTGSSSSSSSSSSSSSSS 154
AGGG S + +N S S S + S
Sbjct: 56 FGAGGGFGSRSLVNLGGSKSISISVARGGGRGS 88
Score = 34.7 bits (78), Expect = 0.21
Identities = 25/84 (29%), Positives = 33/84 (39%)
Query: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141
S G SG G G G + ++++ SGGGGG S+ GG S GS
Sbjct: 6 SSRSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSR 65
Query: 142 SSSSSSSSSSSSSSSSSSSSSSCG 165
S + S S S S + G
Sbjct: 66 SLVNLGGSKSISISVARGGGRGSG 89
Score = 32.0 bits (71), Expect = 1.4
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 9/35 (25%)
Query: 72 STGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNP 106
S GGG GGGG GGGG GGG G C P
Sbjct: 124 SGGGGFGGGGF---------GGGGYGGGYGPVCPP 149
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 78.2 bits (191), Expect = 2e-14
Identities = 55/152 (36%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 38 SSPAPSIGPPASSGPTLFRPE--PIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGG 95
S+ A + G P S P E P + GGGGGGG GGGGGS G GGGG
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 96 GGGGGGSNCN-------PNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
G G GG+ AAA G GGG GG SAG GV SS P G
Sbjct: 270 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSS-PRQQGGGMMMGPGGGG 328
Query: 149 SSSSSSSSSSSSSSSCGPLPGK---PVYSTPS 177
++S S +++ S++ G+ P +TP+
Sbjct: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Score = 58.5 bits (140), Expect = 1e-08
Identities = 52/188 (27%), Positives = 70/188 (37%), Gaps = 23/188 (12%)
Query: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
S SA+++G S +S + P RP +GGGGGGG
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 81 GSGGGGGSSG-------------NGGGGGGGGGGSNCNPNLAAASNGSGG-----GGGGI 122
G+G GG +G GGGGGG GG S L++ GG GGGG
Sbjct: 270 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGA 329
Query: 123 -----SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
+A G A A S ++ + + +S S S G P S P
Sbjct: 330 ASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPP 389
Query: 178 PVENTPQN 185
P + PQ+
Sbjct: 390 PPPSQPQS 397
Score = 39.7 bits (91), Expect = 0.006
Identities = 52/194 (26%), Positives = 69/194 (35%), Gaps = 23/194 (11%)
Query: 3 VPAALIPPTQLVPPQPPISTSASSSGTTTSTS----------SATSSPAPSIGPPASSGP 52
+ A IP +Q+ PPQPP S S SSS S S +P + P +GP
Sbjct: 696 ISPASIPGSQM-PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP 754
Query: 53 TLF-RPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAA 111
++ P P A ++ + G G G GN G + +A
Sbjct: 755 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSG-------VPSA 807
Query: 112 SNGSGGGGGGISAGG---GVASSTPINA-STGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
S G G GISA G S P A G S+ + + SS + SS
Sbjct: 808 SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ 867
Query: 168 PGKPVYSTPSPVEN 181
G P P P N
Sbjct: 868 QGGPGMGPPMPTVN 881
Score = 32.7 bits (73), Expect = 0.79
Identities = 43/174 (24%), Positives = 57/174 (32%), Gaps = 30/174 (17%)
Query: 16 PQP-PISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
PQP P G S + + P GPP S P P G
Sbjct: 90 PQPGPDMEQPQHGGAKDSAAGGQADPP---GPPLLSKPGDEDDAP-----------PKMG 135
Query: 75 GGGGGGGSGGGGGSSGNG-------GGGGGGGGGSNCNPNLAAASNGSGGGGGGISA--- 124
GG G G+ G GGGGG N +A+ SGG GG
Sbjct: 136 EPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFD 195
Query: 125 --GGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTP 176
GG + + S ++++ + S +S +S C PG YS P
Sbjct: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPG---YSRP 246
Score = 30.8 bits (68), Expect = 3.0
Identities = 40/156 (25%), Positives = 54/156 (34%), Gaps = 19/156 (12%)
Query: 27 SGTTTSTSSATSSPAPSI-----GPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGG 81
SG T + + +SP+P + P S P+ P P + AAA G
Sbjct: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA---------AGAA 405
Query: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS----GGGGGGISAGGGVASSTPINAS 137
+GG ++G G G G + +P AAA S G G + G S
Sbjct: 406 AGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVM 465
Query: 138 TGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVY 173
S+ S SS S GP PG Y
Sbjct: 466 KRPQLYGMGSNPHSQPQQSSPYPGGSYGP-PGPQRY 500
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 78.2 bits (191), Expect = 2e-14
Identities = 55/152 (36%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 38 SSPAPSIGPPASSGPTLFRPE--PIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGG 95
S+ A + G P S P E P + GGGGGGG GGGGGS G GGGG
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 96 GGGGGGSNCN-------PNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
G G GG+ AAA G GGG GG SAG GV SS P G
Sbjct: 270 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSS-PRQQGGGMMMGPGGGG 328
Query: 149 SSSSSSSSSSSSSSSCGPLPGK---PVYSTPS 177
++S S +++ S++ G+ P +TP+
Sbjct: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Score = 58.5 bits (140), Expect = 1e-08
Identities = 52/188 (27%), Positives = 70/188 (37%), Gaps = 23/188 (12%)
Query: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
S SA+++G S +S + P RP +GGGGGGG
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 81 GSGGGGGSSG-------------NGGGGGGGGGGSNCNPNLAAASNGSGG-----GGGGI 122
G+G GG +G GGGGGG GG S L++ GG GGGG
Sbjct: 270 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGA 329
Query: 123 -----SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
+A G A A S ++ + + +S S S G P S P
Sbjct: 330 ASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPP 389
Query: 178 PVENTPQN 185
P + PQ+
Sbjct: 390 PPPSQPQS 397
Score = 39.7 bits (91), Expect = 0.006
Identities = 52/194 (26%), Positives = 69/194 (35%), Gaps = 23/194 (11%)
Query: 3 VPAALIPPTQLVPPQPPISTSASSSGTTTSTS----------SATSSPAPSIGPPASSGP 52
+ A IP +Q+ PPQPP S S SSS S S +P + P +GP
Sbjct: 683 ISPASIPGSQM-PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP 741
Query: 53 TLF-RPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAA 111
++ P P A ++ + G G G GN G + +A
Sbjct: 742 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSG-------VPSA 794
Query: 112 SNGSGGGGGGISAGG---GVASSTPINA-STGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
S G G GISA G S P A G S+ + + SS + SS
Sbjct: 795 SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ 854
Query: 168 PGKPVYSTPSPVEN 181
G P P P N
Sbjct: 855 QGGPGMGPPMPTVN 868
Score = 32.7 bits (73), Expect = 0.79
Identities = 43/174 (24%), Positives = 57/174 (32%), Gaps = 30/174 (17%)
Query: 16 PQP-PISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
PQP P G S + + P GPP S P P G
Sbjct: 90 PQPGPDMEQPQHGGAKDSAAGGQADPP---GPPLLSKPGDEDDAP-----------PKMG 135
Query: 75 GGGGGGGSGGGGGSSGNG-------GGGGGGGGGSNCNPNLAAASNGSGGGGGGISA--- 124
GG G G+ G GGGGG N +A+ SGG GG
Sbjct: 136 EPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFD 195
Query: 125 --GGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTP 176
GG + + S ++++ + S +S +S C PG YS P
Sbjct: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPG---YSRP 246
Score = 30.8 bits (68), Expect = 3.0
Identities = 40/156 (25%), Positives = 54/156 (34%), Gaps = 19/156 (12%)
Query: 27 SGTTTSTSSATSSPAPSI-----GPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGG 81
SG T + + +SP+P + P S P+ P P + AAA G
Sbjct: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA---------AGAA 405
Query: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS----GGGGGGISAGGGVASSTPINAS 137
+GG ++G G G G + +P AAA S G G + G S
Sbjct: 406 AGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVM 465
Query: 138 TGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVY 173
S+ S SS S GP PG Y
Sbjct: 466 KRPQLYGMGSNPHSQPQQSSPYPGGSYGP-PGPQRY 500
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 78.2 bits (191), Expect = 2e-14
Identities = 55/152 (36%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 38 SSPAPSIGPPASSGPTLFRPE--PIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGG 95
S+ A + G P S P E P + GGGGGGG GGGGGS G GGGG
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 96 GGGGGGSNCN-------PNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
G G GG+ AAA G GGG GG SAG GV SS P G
Sbjct: 270 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSS-PRQQGGGMMMGPGGGG 328
Query: 149 SSSSSSSSSSSSSSSCGPLPGK---PVYSTPS 177
++S S +++ S++ G+ P +TP+
Sbjct: 329 AASLSKAAAGSAAGGFQRFAGQNQHPSGATPT 360
Score = 58.5 bits (140), Expect = 1e-08
Identities = 52/188 (27%), Positives = 70/188 (37%), Gaps = 23/188 (12%)
Query: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
S SA+++G S +S + P RP +GGGGGGG
Sbjct: 210 SASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGG 269
Query: 81 GSGGGGGSSG-------------NGGGGGGGGGGSNCNPNLAAASNGSGG-----GGGGI 122
G+G GG +G GGGGGG GG S L++ GG GGGG
Sbjct: 270 GAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGA 329
Query: 123 -----SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
+A G A A S ++ + + +S S S G P S P
Sbjct: 330 ASLSKAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPP 389
Query: 178 PVENTPQN 185
P + PQ+
Sbjct: 390 PPPSQPQS 397
Score = 39.7 bits (91), Expect = 0.006
Identities = 52/194 (26%), Positives = 69/194 (35%), Gaps = 23/194 (11%)
Query: 3 VPAALIPPTQLVPPQPPISTSASSSGTTTSTS----------SATSSPAPSIGPPASSGP 52
+ A IP +Q+ PPQPP S S SSS S S +P + P +GP
Sbjct: 683 ISPASIPGSQM-PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGP 741
Query: 53 TLF-RPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAA 111
++ P P A ++ + G G G GN G + +A
Sbjct: 742 SMSPHPSPGGQMHAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSG-------VPSA 794
Query: 112 SNGSGGGGGGISAGG---GVASSTPINA-STGSSSSSSSSSSSSSSSSSSSSSSSSCGPL 167
S G G GISA G S P A G S+ + + SS + SS
Sbjct: 795 SYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ 854
Query: 168 PGKPVYSTPSPVEN 181
G P P P N
Sbjct: 855 QGGPGMGPPMPTVN 868
Score = 32.7 bits (73), Expect = 0.79
Identities = 43/174 (24%), Positives = 57/174 (32%), Gaps = 30/174 (17%)
Query: 16 PQP-PISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
PQP P G S + + P GPP S P P G
Sbjct: 90 PQPGPDMEQPQHGGAKDSAAGGQADPP---GPPLLSKPGDEDDAP-----------PKMG 135
Query: 75 GGGGGGGSGGGGGSSGNG-------GGGGGGGGGSNCNPNLAAASNGSGGGGGGISA--- 124
GG G G+ G GGGGG N +A+ SGG GG
Sbjct: 136 EPAGGRYEHPGLGALGTQQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFD 195
Query: 125 --GGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTP 176
GG + + S ++++ + S +S +S C PG YS P
Sbjct: 196 QHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPG---YSRP 246
Score = 30.8 bits (68), Expect = 3.0
Identities = 40/156 (25%), Positives = 54/156 (34%), Gaps = 19/156 (12%)
Query: 27 SGTTTSTSSATSSPAPSI-----GPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGG 81
SG T + + +SP+P + P S P+ P P + AAA G
Sbjct: 355 SGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQAAA---------AGAA 405
Query: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS----GGGGGGISAGGGVASSTPINAS 137
+GG ++G G G G + +P AAA S G G + G S
Sbjct: 406 AGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVM 465
Query: 138 TGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVY 173
S+ S SS S GP PG Y
Sbjct: 466 KRPQLYGMGSNPHSQPQQSSPYPGGSYGP-PGPQRY 500
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 77.4 bits (189), Expect = 3e-14
Identities = 46/107 (42%), Positives = 51/107 (47%), Gaps = 7/107 (6%)
Query: 70 VTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNG-------SGGGGGGI 122
V ++GGGGGGGGSGGGG GGG GGG GS C + +G SGGGGGG
Sbjct: 17 VKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGG 76
Query: 123 SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
G G S + S G SS S SS S SS G G
Sbjct: 77 IGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSG 123
Score = 74.7 bits (182), Expect = 2e-13
Identities = 52/159 (32%), Positives = 64/159 (40%), Gaps = 14/159 (8%)
Query: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
PQPP+ +S G G G F ++ + S GG
Sbjct: 10 PQPPVDCVKTSGGGGGG------------GGSGGGGCGFFGGGGSGGGSSGSGCGYSGGG 57
Query: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS--STP 133
G GGG GGG G GGG GG GGGS + + SGGG G S+GGG + S+
Sbjct: 58 GYSGGGCGGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSG 117
Query: 134 INASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPV 172
S+G S SS SS S SS G G+ V
Sbjct: 118 GGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAV 156
Score = 71.6 bits (174), Expect = 2e-12
Identities = 45/101 (44%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 72 STGGGGGGGGSG---GGGGSSG--NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGI--SA 124
S GGG GGGSG GGG SG + GGGG GGGS C ++ GS GGG G S
Sbjct: 91 SGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGC---FSSGGGGSSGGGSGCFSSG 147
Query: 125 GGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
GGG + S G SS SS S SS S CG
Sbjct: 148 GGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCG 188
Score = 69.7 bits (169), Expect = 6e-12
Identities = 47/128 (36%), Positives = 53/128 (41%), Gaps = 23/128 (17%)
Query: 56 RPEPIASAAAAAATVTSTGGGGGG---------GGSGGGGGSSGNGGG--GGGGGGGSNC 104
+ +P + GGGGGG GG G GGGSSG+G G GGGG G C
Sbjct: 5 KKQPTPQPPVDCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGC 64
Query: 105 NPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS--------SSSSSS 156
S+G GGGGG GGG S + GSS S SS SS
Sbjct: 65 ----GGGSSGGGGGGGIGGCGGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGG 120
Query: 157 SSSSSSSC 164
SS S C
Sbjct: 121 SSGGGSGC 128
Score = 67.8 bits (164), Expect = 2e-11
Identities = 42/119 (35%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 62 SAAAAAATVTSTGGGG-----------GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAA 110
S+ + S+GGGG GGGGS GGG + GGGG G C
Sbjct: 105 SSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGV 164
Query: 111 ASNGSGGGGGG-ISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLP 168
+S GS GGG G S+GGG S + SS S S SS + +SC P P
Sbjct: 165 SSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQP 223
Score = 66.2 bits (160), Expect = 6e-11
Identities = 45/121 (37%), Positives = 52/121 (42%), Gaps = 25/121 (20%)
Query: 72 STGGGGGGGGSGGGGGSSGNG------GGGGGGGGGSNCNPNLAAASNGSGGGG------ 119
S+GGGG G S GGGGSSG G GGGG GGGS C SGGGG
Sbjct: 105 SSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGGSGCF--------SSGGGGFSGQAV 156
Query: 120 -----GGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYS 174
GG+S+GG + +S G S S S SS S G + + V
Sbjct: 157 QCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQ 216
Query: 175 T 175
T
Sbjct: 217 T 217
Score = 63.5 bits (153), Expect = 4e-10
Identities = 48/135 (35%), Positives = 56/135 (41%), Gaps = 33/135 (24%)
Query: 62 SAAAAAATVTSTGGGGGGGGSG----GGGGSSG----------------NGGGGG----G 97
S+ + +S GGG GGGSG GGGG SG +GGG G G
Sbjct: 121 SSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSG 180
Query: 98 GGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS-------TPINASTGSSSSSSSSSSS 150
GGGGS C + +G GGG G S G V+S P + G SS S S
Sbjct: 181 GGGGSVC--GYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGS 238
Query: 151 SSSSSSSSSSSSSCG 165
SS SS CG
Sbjct: 239 GCFSSGGGGGSSGCG 253
Score = 60.5 bits (145), Expect = 4e-09
Identities = 36/69 (52%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 72 STGGGGGGGG----SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS-GGGGGGISAGG 126
S+GGGG GG SGGGGGSSG GGG G G G + + GS GGGGGG S GG
Sbjct: 229 SSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGG 288
Query: 127 -GVASSTPI 134
G PI
Sbjct: 289 SGSGKGVPI 297
Score = 59.3 bits (142), Expect = 8e-09
Identities = 40/114 (35%), Positives = 49/114 (42%), Gaps = 5/114 (4%)
Query: 22 TSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGG 81
+S G+ S S + SG + S A + + GGGG GG
Sbjct: 178 SSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGG 237
Query: 82 -----SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
SGGGGGSSG GGG G G G + + GS GGGGG S+ GG S
Sbjct: 238 SGCFSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGSGS 291
Score = 57.8 bits (138), Expect = 2e-08
Identities = 45/126 (35%), Positives = 49/126 (38%), Gaps = 36/126 (28%)
Query: 72 STGGGGG------GGGSGGGGGSSGN----------------------GGGGGGGG--GG 101
S+GGGGG GGGSG GGGSSG GGG GGG GG
Sbjct: 178 SSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGG 237
Query: 102 SNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS 161
S C S+G GGG G G S I + GS SS SS S S
Sbjct: 238 SGC------FSSGGGGGSSGCGGGSSGIGSGCIISGGGSVCGGGSSGGGGGGSSVGGSGS 291
Query: 162 SSCGPL 167
P+
Sbjct: 292 GKGVPI 297
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 11/90 (12%)
Query: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
PQP S SSG S S S G G S+ + + S GG
Sbjct: 221 PQP--SYGGGSSGGGGSGGSGCFSSGGGGGSSGCGG---------GSSGIGSGCIISGGG 269
Query: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCN 105
GGGS GGGG + GG G G G C+
Sbjct: 270 SVCGGGSSGGGGGGSSVGGSGSGKGVPICH 299
Score = 38.5 bits (88), Expect = 0.014
Identities = 27/86 (31%), Positives = 30/86 (34%), Gaps = 13/86 (15%)
Query: 89 SGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
+ GGGGGGG GG C G GGGG GG +S + S G S
Sbjct: 19 TSGGGGGGGGSGGGGC---------GFFGGGGS----GGGSSGSGCGYSGGGGYSGGGCG 65
Query: 149 SSSSSSSSSSSSSSSCGPLPGKPVYS 174
SS G G YS
Sbjct: 66 GGSSGGGGGGGIGGCGGGSGGSVKYS 91
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 77.4 bits (189), Expect = 3e-14
Identities = 60/197 (30%), Positives = 86/197 (43%), Gaps = 24/197 (12%)
Query: 3 VPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSP-APSIGPPASSGPTLFRPEPIA 61
VPA PP+ L P P S +S T +P A ++ PPA SGP+ +P P +
Sbjct: 343 VPAPAAPPSALGPKASP----------APSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPS 392
Query: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
+ GGGGGGSGGGG SS + GGG G N + ++ S
Sbjct: 393 VQPS----------GGGGGGSGGGGSSSSSNSSAGGGAGKQNGATSYSSVVADSPAEVAL 442
Query: 122 ISAGGGVASSTPINASTG--SSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPV 179
S+GG ASS + +G + S+S S+++ + + + G G P P PV
Sbjct: 443 SSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPV 502
Query: 180 ENTPQNNECKMVDLRGA 196
N P + D + A
Sbjct: 503 -NPPSSPTPSFSDAKAA 518
Score = 39.7 bits (91), Expect = 0.006
Identities = 59/237 (24%), Positives = 83/237 (35%), Gaps = 65/237 (27%)
Query: 3 VPAALI---PPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSI--------------- 44
+P AL+ PP+ + S+S+ +TTS+S SPA
Sbjct: 234 IPQALVATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTD 293
Query: 45 ----GPPASSG------------PTLFRPEPIASAAAAAATVTSTGGGG--------GGG 80
PA +G P + P AA+A T+ G G
Sbjct: 294 SEVSQSPAKNGSKPVHSNQHPQSPAVPPTYPSGPPPAASALSTTPGNNGVPAPAAPPSAL 353
Query: 81 GSGGGGGSSGNGG---------GGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
G S N G G S P + GGGGG S GGG +SS
Sbjct: 354 GPKASPAPSHNSGTPAPYAQAVAPPAPSGPSTTQPRPPSVQPSGGGGGG--SGGGGSSSS 411
Query: 132 TPINASTGSSSSSSSSSSSS-----------SSSSSSSSSSSSCGPLPGKPVYSTPS 177
+ +A G+ + ++S SS SSS +++SS + GP P P PS
Sbjct: 412 SNSSAGGGAGKQNGATSYSSVVADSPAEVALSSSGGNNASSQALGP-PSGPHNPPPS 467
>gi|4507163 SRY (sex determining region Y)-box 4 [Homo sapiens]
Length = 474
Score = 77.0 bits (188), Expect = 4e-14
Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 36/146 (24%)
Query: 61 ASAAAAAATVTS-----TGGGGGGGGSGGGGGSSGNGGGGGGG--GGGSNCNP--NLAAA 111
+S++AAA++ GG GGGG GGGGG S N GGGGGG GGG+N P +
Sbjct: 141 SSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQKKSCG 200
Query: 112 SNGSGGGGGGIS--------AGG-------------------GVASSTPINASTGSSSSS 144
S +GG GGG+S AGG G A+ P+ A+ S
Sbjct: 201 SKVAGGAGGGVSKPHAKLILAGGGGGGKAAAAAAASFAAEQAGAAALLPLGAAADHHSLY 260
Query: 145 SSSSSSSSSSSSSSSSSSSCGPLPGK 170
+ + S+S+S+SS++S+S+ PGK
Sbjct: 261 KARTPSASASASSAASASAALAAPGK 286
Score = 46.2 bits (108), Expect = 7e-05
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 23 SASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGS 82
+A+++ + + A ++ +G A P ASA+A++A S G
Sbjct: 229 AAAAAAASFAAEQAGAAALLPLGAAADHHSLYKARTPSASASASSAASASAALAAPGKHL 288
Query: 83 G----------GGGGSSGNGGGGGGGGG------------GSNCNPNL--------AAAS 112
GG G+S + GG G G G+ C+P+ AA+S
Sbjct: 289 AEKKVKRVYLFGGLGTSSSPVGGVGAGADPSDPLGLYEEEGAGCSPDAPSLSGRSSAASS 348
Query: 113 NGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSS 161
+G + +++P +S S +SSS+SS SSSSSSS SSSS
Sbjct: 349 PAAGRSPADHRGYASLRAASPAPSSAPSHASSSASSHSSSSSSSGSSSS 397
Score = 35.0 bits (79), Expect = 0.16
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
Query: 100 GGSNCNPNLAAASNGS------GGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSS 153
G +N + + AA+S GG GGG GGG S+ G +S ++S +
Sbjct: 137 GNANSSSSAAASSKPGEKGDKVGGSGGGGHGGGGGGGSSNAGGGGGGASGGGANSKPAQK 196
Query: 154 SSSSSSSSSSCGPLPGKP 171
S S + G KP
Sbjct: 197 KSCGSKVAGGAGGGVSKP 214
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 73.6 bits (179), Expect = 4e-13
Identities = 47/135 (34%), Positives = 71/135 (52%), Gaps = 7/135 (5%)
Query: 58 EPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGG 117
E +S+++++ + +S+ G G G GG G GG NC+ + A++ +
Sbjct: 2556 ESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASS 2615
Query: 118 GGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
S+ +SS+ ++S+ SSSSSSSSSSSSSSSSSSSSSSSS S+ S
Sbjct: 2616 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------SSSS 2668
Query: 178 PVENTPQNNECKMVD 192
T +++ C D
Sbjct: 2669 SSSTTDEDSSCSSDD 2683
Score = 70.1 bits (170), Expect = 4e-12
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
P+ P A G S SS++SS S +SS +S +
Sbjct: 2541 PKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSS----------SSGSETEGEEEGDKN 2590
Query: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPIN 135
G GG G+GG S+ + S+ + + +++S+ S S+ +SS+ +
Sbjct: 2591 GDGGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2650
Query: 136 ASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
+S+ SSSSSSSSSSSSSSSSS++ SSC
Sbjct: 2651 SSSSSSSSSSSSSSSSSSSSSTTDEDSSC 2679
Score = 37.7 bits (86), Expect = 0.025
Identities = 50/195 (25%), Positives = 62/195 (31%), Gaps = 35/195 (17%)
Query: 6 ALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAA 65
A P + PPQP + A +S + +PA S+ P RP+P + AA
Sbjct: 2384 AKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPLITMPATRPKPKKARAA 2443
Query: 66 AAATVTSTGGGGGGG---------------------------GSGGGGGSSGNG----GG 94
+ G G GG G
Sbjct: 2444 EESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDPGAGGWQEPKSLLSLGS 2503
Query: 95 GGGGGGGSNCNPNLAAASNGS----GGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
G S A++G G G G S A + S SSSSS
Sbjct: 2504 YPPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSS 2563
Query: 151 SSSSSSSSSSSSSCG 165
SS SSSSSSSSSS G
Sbjct: 2564 SSGSSSSSSSSSSSG 2578
Score = 29.3 bits (64), Expect = 8.8
Identities = 19/51 (37%), Positives = 26/51 (50%)
Query: 106 PNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSS 156
P L +G+ A A + ++S+ S SSSSSSSSSSS S +
Sbjct: 2531 PGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSET 2581
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 72.0 bits (175), Expect = 1e-12
Identities = 58/201 (28%), Positives = 76/201 (37%), Gaps = 26/201 (12%)
Query: 8 IPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAA 67
+PP PP P + + + T T A + S S G L + +A
Sbjct: 3 VPPPPAPPPPPTFALANTEKPTLNKTEQAGRNALLS---DISKGKKLKKTVTNDRSAPIL 59
Query: 68 ATVTSTGGGGGGGGSGGGGGSSGNGGGGGGG--GGGSNCN---------PNLAAASNGSG 116
G GGGGGG GGGGG G GGGGGGG GGG P L + +N
Sbjct: 60 DKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDN 119
Query: 117 GGGGG----ISAGGGVASSTPINASTGSS-----SSSSSSSSSSSSSSSSSSSSSSCGPL 167
GG + GG S+ P + +G S S + G
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSK 179
Query: 168 PGK---PVYSTPSPVENTPQN 185
P PV STP P++++P N
Sbjct: 180 PDSIPPPVPSTPRPIQSSPHN 200
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 72.0 bits (175), Expect = 1e-12
Identities = 58/201 (28%), Positives = 76/201 (37%), Gaps = 26/201 (12%)
Query: 8 IPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAA 67
+PP PP P + + + T T A + S S G L + +A
Sbjct: 3 VPPPPAPPPPPTFALANTEKPTLNKTEQAGRNALLS---DISKGKKLKKTVTNDRSAPIL 59
Query: 68 ATVTSTGGGGGGGGSGGGGGSSGNGGGGGGG--GGGSNCN---------PNLAAASNGSG 116
G GGGGGG GGGGG G GGGGGGG GGG P L + +N
Sbjct: 60 DKPKGAGAGGGGGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGLFQAGMPKLRSTANRDN 119
Query: 117 GGGGG----ISAGGGVASSTPINASTGSS-----SSSSSSSSSSSSSSSSSSSSSSCGPL 167
GG + GG S+ P + +G S S + G
Sbjct: 120 DSGGSRPPLLPPGGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSK 179
Query: 168 PGK---PVYSTPSPVENTPQN 185
P PV STP P++++P N
Sbjct: 180 PDSIPPPVPSTPRPIQSSPHN 200
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 69.7 bits (169), Expect = 6e-12
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 7 LIPPTQLVPPQPPISTSASSSGTTTSTSSA--TSSPAPSIGPPASSGPTL----FRPEPI 60
L P PP P ++A +S T+ S++ + S P GP +S T + E
Sbjct: 78 LAPEPLSAPPGSPPPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMKESR 137
Query: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAA 111
++ + + G GGGGG GGGGGS G+GGGGGGGGGG P AA+
Sbjct: 138 QTSKLKNNSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAAS 188
Score = 43.9 bits (102), Expect = 3e-04
Identities = 41/168 (24%), Positives = 61/168 (36%), Gaps = 21/168 (12%)
Query: 14 VPPQPPISTSASSSGTTTSTSSATSS---PAPSIGPPASSGPTL---FRPEPIASAA--- 64
VPPQPP + G ++ + S AP +G + PEP+++
Sbjct: 31 VPPQPPFQAATHLEGDYQRSACSLQSLGNAAPHAKSKELNGSCMRPGLAPEPLSAPPGSP 90
Query: 65 --AAAATVTSTGGGGGGGGSGGGGGSSGNGGGGG----------GGGGGSNCNPNLAAAS 112
+AA T ++ GGG S G G G S N +
Sbjct: 91 PPSAAPTSATSNSSNGGGPSKSGPPKCGPGTNSTLTKQIFPWMKESRQTSKLKNNSPGTA 150
Query: 113 NGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSS 160
G GGGGGG GG S G S S++S + ++ +S+
Sbjct: 151 EGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPPGSAASKRARTAYTSA 198
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 69.3 bits (168), Expect = 8e-12
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 23 SASSSGTTTSTSSATSSPAPSIGPPASSGP------TLFRPEPIASAAAAAATVTSTGGG 76
SA+S+ + ++A +S A + G P S G + + A+AAAAAA + GG
Sbjct: 355 SAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRGG 414
Query: 77 GGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSG 116
GGGGG GGGG GGGG G GGGS+ + AA + SG
Sbjct: 415 GGGGGGGGGG-----GGGGAGAGGGSDFGCSAAAPRSESG 449
Score = 51.2 bits (121), Expect = 2e-06
Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 28/173 (16%)
Query: 22 TSASSSGTTTSTSSATSSP-APSIGPPAS--------SGPTL---FRPEPIASAAAAAAT 69
T+A+++ + ++A SSP A SI P + S P L FR + A AAAA
Sbjct: 293 TAAAAAAAASGAAAAASSPFATSIRPLDTFRALSHPYSRPELLCSFRHPGLYQAPAAAAG 352
Query: 70 VTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC-------NPNLAAA---------SN 113
+ S + SS G GG + C + + AAA S
Sbjct: 353 LNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSR 412
Query: 114 GSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGP 166
G GGGGGG GGG + + G S+++ S S S++ S ++ P
Sbjct: 413 GGGGGGGGGGGGGGGGAGAGGGSDFGCSAAAPRSESGFLPYSAAVLSKTAVSP 465
Score = 40.0 bits (92), Expect = 0.005
Identities = 19/40 (47%), Positives = 22/40 (55%)
Query: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGG 100
A + +AA T TS G G G GG GGS G+ GG G G
Sbjct: 145 AESGSAAGTTTSASGSGLGSLHGGSGGSGGSAALGGSGSG 184
Score = 37.0 bits (84), Expect = 0.042
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 27 SGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG---GSG 83
+G+ ++ SS SS A S P + + + + S GG G +G
Sbjct: 82 TGSESTVSSEISSAAESRKKPGHYSEAAAEADMSSDVEVGCSALRSPGGLGAAQLKENNG 141
Query: 84 GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
G SG+ G GS L + GSGG GG + GG
Sbjct: 142 KGYAESGSAAGTTTSASGSG----LGSLHGGSGGSGGSAALGG 180
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 68.9 bits (167), Expect = 1e-11
Identities = 40/115 (34%), Positives = 54/115 (46%)
Query: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASST 132
+G GGG SGGG GS G G G +N + + ++S S GG G S+GG +S
Sbjct: 235 SGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG 294
Query: 133 PINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVENTPQNNE 187
+GS SS SS+ SSS + S + P KP E+ QN+E
Sbjct: 295 GSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSGESGIQNSE 349
Score = 52.8 bits (125), Expect = 7e-07
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS---------------GGG 118
G G G G G GG GG G+N +A GS G
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 119 GGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
GGG S GG + S ++ +GS+ +++ SSS SSS SSS SS G G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGG 288
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 72 STGGGGGGGGSGG-GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
S+ G GG SGG GGSSGN GG G G + + +S+G+ GG GG G
Sbjct: 272 SSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGG-GNGHKPGC 330
Query: 131 STPINASTGSSSSSSSSSSSS 151
P N + GS S +S +S
Sbjct: 331 EKPGNEARGSGESGIQNSETS 351
Score = 51.2 bits (121), Expect = 2e-06
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 41/139 (29%)
Query: 72 STGG-GGGGGGSGGG----------GGSSGNGG--------GGGGGGGGSNCNPNLAAA- 111
S GG GG G G+ GG G S+G+ G G GG GG N N A
Sbjct: 153 SQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAV 212
Query: 112 ---------------------SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
+GSGGG G G S + + S G +++ SSS S
Sbjct: 213 AQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGS 272
Query: 151 SSSSSSSSSSSSSCGPLPG 169
SS SSS SS S G G
Sbjct: 273 SSGSSSGGSSGGSSGGSSG 291
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 68.9 bits (167), Expect = 1e-11
Identities = 40/115 (34%), Positives = 54/115 (46%)
Query: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASST 132
+G GGG SGGG GS G G G +N + + ++S S GG G S+GG +S
Sbjct: 235 SGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG 294
Query: 133 PINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPSPVENTPQNNE 187
+GS SS SS+ SSS + S + P KP E+ QN+E
Sbjct: 295 GSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSGESGIQNSE 349
Score = 52.8 bits (125), Expect = 7e-07
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS---------------GGG 118
G G G G G GG GG G+N +A GS G
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 119 GGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
GGG S GG + S ++ +GS+ +++ SSS SSS SSS SS G G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGG 288
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 72 STGGGGGGGGSGG-GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
S+ G GG SGG GGSSGN GG G G + + +S+G+ GG GG G
Sbjct: 272 SSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGG-GNGHKPGC 330
Query: 131 STPINASTGSSSSSSSSSSSS 151
P N + GS S +S +S
Sbjct: 331 EKPGNEARGSGESGIQNSETS 351
Score = 51.2 bits (121), Expect = 2e-06
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 41/139 (29%)
Query: 72 STGG-GGGGGGSGGG----------GGSSGNGG--------GGGGGGGGSNCNPNLAAA- 111
S GG GG G G+ GG G S+G+ G G GG GG N N A
Sbjct: 153 SQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAV 212
Query: 112 ---------------------SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
+GSGGG G G S + + S G +++ SSS S
Sbjct: 213 AQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGS 272
Query: 151 SSSSSSSSSSSSSCGPLPG 169
SS SSS SS S G G
Sbjct: 273 SSGSSSGGSSGGSSGGSSG 291
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 67.4 bits (163), Expect = 3e-11
Identities = 42/98 (42%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Query: 72 STGGGGGGGGSGGG----GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGG 127
S GGGG GGG GGG GGS G+ GGG G GGGS + SGG GGG S G G
Sbjct: 496 SYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSG 555
Query: 128 VASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
N GS S S S S S S G
Sbjct: 556 G------NYGGGSGSGGGSGGGYGGGSGSRGGSGGSHG 587
Score = 65.9 bits (159), Expect = 8e-11
Identities = 39/103 (37%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 72 STGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
S GG GGG G G GGG SG GGG GG G N +GSGGG GG GG +
Sbjct: 526 SGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGN-----YGGGSGSGGGSGGGYGGGSGSRG 580
Query: 132 TPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYS 174
+ G S S S +S S G GK +S
Sbjct: 581 GSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS 623
Score = 65.1 bits (157), Expect = 1e-10
Identities = 39/98 (39%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 74 GGGGGGGGS------GGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGG 127
GG GG GGS GG GGS G GG GGG GGGS + G G GGG +GGG
Sbjct: 476 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGG--SGGG 533
Query: 128 VASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
+ S GS S S + S S S G
Sbjct: 534 YGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Score = 63.2 bits (152), Expect = 5e-10
Identities = 35/89 (39%), Positives = 41/89 (46%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP 133
G GG GGS GGGGS G GGG G GGS + + S G GGG G +GGG + +
Sbjct: 488 GSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSG 547
Query: 134 INASTGSSSSSSSSSSSSSSSSSSSSSSS 162
S GS + S S S S
Sbjct: 548 GGHSGGSGGNYGGGSGSGGGSGGGYGGGS 576
Score = 62.0 bits (149), Expect = 1e-09
Identities = 39/96 (40%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 73 TGGGGGGGGSGGGGGSSGNGGGG--GGGGGGSNCNPNLAAASNGSGGG-GGGISAGGGVA 129
+G GG GGS GGG SG G GG GGG GG + + S GSGG GGG +GGG
Sbjct: 510 SGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGG-- 567
Query: 130 SSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
S +GS S S S S S G
Sbjct: 568 SGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGG 603
Score = 56.2 bits (134), Expect = 7e-08
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 62 SAAAAAATVTSTGGGGGGG----GSGGGGGSS---GNGGGGGGG---GGGSNCNPNLAAA 111
S ++ + +S+GGGGGGG SG GGGSS G GGGG G GGGS + ++
Sbjct: 27 SIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSL 86
Query: 112 SNGSGGG--GGGISAGGGVASSTPINASTGSSS 142
G GGG G G ++GGG +SS G S
Sbjct: 87 GGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGS 119
Score = 54.7 bits (130), Expect = 2e-07
Identities = 37/108 (34%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 67 AATVTSTGGGGGGGGSGGGGG-----SSGNGGGGGGGGGGSNCNPNLAAASN---GSGGG 118
+++ S GGGGGGG G GG S + GGGGGGG + + S+ G GGG
Sbjct: 7 SSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGG 66
Query: 119 GG-GISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
G G S GGG ++ G S +S SSS G
Sbjct: 67 GSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGG 114
Score = 52.8 bits (125), Expect = 7e-07
Identities = 29/65 (44%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 69 TVTSTGGGGGGGG------SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGI 122
+ +S GGG GGG SGGG SSG GGG GGG G + G GG GGG
Sbjct: 82 SASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGA 141
Query: 123 SAGGG 127
G G
Sbjct: 142 GGGDG 146
Score = 51.2 bits (121), Expect = 2e-06
Identities = 34/95 (35%), Positives = 37/95 (38%), Gaps = 13/95 (13%)
Query: 72 STGGGGGG-GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
S+G G G GG GG GGS G G GG GG S G GG GGG G G
Sbjct: 467 SSGAGKIGLGGRGGSGGSYGRGSRGGSGG------------SYGGGGSGGGYGGGSGSRG 514
Query: 131 STPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
+ + GS S S S S S G
Sbjct: 515 GSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGG 549
Score = 50.4 bits (119), Expect = 4e-06
Identities = 37/124 (29%), Positives = 53/124 (42%), Gaps = 7/124 (5%)
Query: 74 GGGGGGG--GSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASS 131
GG GGG SGG GG G G GGG GGG + G+GGG GGI ++
Sbjct: 98 GGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGGILTANEKSTM 157
Query: 132 TPINASTGSSSSSSSSSSSSSSSSSSSSSS--SSCGPLPGKPVYSTPSPVENTPQNNECK 189
+N+ S + +++ + GP + Y SP NT + + +
Sbjct: 158 QELNSRLASYLDKVQALEEANNDLENKIQDWYDKKGPAAIQKNY---SPYYNTIDDLKDQ 214
Query: 190 MVDL 193
+VDL
Sbjct: 215 IVDL 218
Score = 50.1 bits (118), Expect = 5e-06
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 67 AATVTSTGGGGG-----GGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
++ V GGGG GGGSGGG +S GGG GGG G +S+G GGG G
Sbjct: 57 SSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFG 116
Query: 122 ISAGGG 127
+GGG
Sbjct: 117 GGSGGG 122
Score = 44.3 bits (103), Expect = 3e-04
Identities = 28/88 (31%), Positives = 31/88 (35%)
Query: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAS 137
GG G+ G GG GG GGS + + GGGG G GGG S S
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGS 519
Query: 138 TGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
G S S S S S G
Sbjct: 520 YGGGSGSGGGSGGGYGGGSGGGHSGGSG 547
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/94 (32%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGG-GGGSNCNPNLAAASNGSGGG-GGGISAGGGVASS 131
GG SG G G GG GG G GS + GSGGG GGG + GG S
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGS 519
Query: 132 TPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
+ +G S S S S S G
Sbjct: 520 YGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGG 553
Score = 33.9 bits (76), Expect = 0.36
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 103 NCNPNLAAASNGSGGGGGG-ISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSS 158
+C ++ + SGGGGGG + +GG + SS +S+G SSSS SS
Sbjct: 2 SCRQFSSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSS 58
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 67.0 bits (162), Expect = 4e-11
Identities = 32/54 (59%), Positives = 32/54 (59%), Gaps = 11/54 (20%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGG 127
GGGGGGGG GGGGG G GG GGGGGG G GGGGGG GGG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGGGW-----------GGGGGGGGGWGGGGG 381
Score = 60.1 bits (144), Expect = 5e-09
Identities = 29/54 (53%), Positives = 29/54 (53%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGG 127
GGGGG GG GGGGG G GGGGGGG GG G GG GG GG
Sbjct: 351 GGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGG 404
Score = 58.9 bits (141), Expect = 1e-08
Identities = 28/50 (56%), Positives = 28/50 (56%)
Query: 78 GGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGG 127
GGGG GG GG G GG GGGGGGG G GGGGGG GGG
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGG 380
Score = 57.4 bits (137), Expect = 3e-08
Identities = 29/52 (55%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAG 125
GGG GGGG GGG G G GGGG GGGGG G GGGGGG G
Sbjct: 344 GGGRGGGGGGGGRGGWGGGGGGWGGGGG---------GGGGWGGGGGGGRGG 386
Score = 57.0 bits (136), Expect = 4e-08
Identities = 30/54 (55%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 74 GGGGGGGGSGG-GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
GGGGGGGG GG GGG G GGGGGGGGG G GGG GG G
Sbjct: 348 GGGGGGGGRGGWGGGGGGWGGGGGGGGGW----------GGGGGGGRGGFQGRG 391
Score = 56.6 bits (135), Expect = 5e-08
Identities = 31/70 (44%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 74 GGGGGG----GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVA 129
GGGGGG GG GGG G G GGGG GGGGG G GG GG GG
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRG 409
Query: 130 SSTPINASTG 139
P G
Sbjct: 410 YGDPYGGGGG 419
Score = 56.6 bits (135), Expect = 5e-08
Identities = 30/61 (49%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 74 GGGGGGGGSGGGGGSSGN-------GGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
GGGGGGG GGGGG G GG GG GG G G GGGGGG GG
Sbjct: 369 GGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGGGG 428
Query: 127 G 127
G
Sbjct: 429 G 429
Score = 56.2 bits (134), Expect = 7e-08
Identities = 30/61 (49%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
Query: 74 GGGGGGGGSGGGGGSSGNGG-------GGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
GGGGGGGG GGGG G GG GG GG GG GGGGGG GG
Sbjct: 367 GGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGGGGGGGG 426
Query: 127 G 127
G
Sbjct: 427 G 427
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 66.6 bits (161), Expect = 5e-11
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 18/138 (13%)
Query: 16 PQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG 75
P+ P+ T +S+ + +AT P+ +S ++ P ++ + A+ ST
Sbjct: 318 PETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSM--PMYVSGSQVVAS---STST 372
Query: 76 GGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGG-GGGGISAGGGVASSTPI 134
G G S GGGGS G GGGGGGGGGG GSG GGGG AG V +
Sbjct: 373 GAGASNSSGGGGSGGGGGGGGGGGGG------------GSGSTGGGGSGAGTYVIQGGYM 420
Query: 135 NASTGSSSSSSSSSSSSS 152
S S S ++ +S ++
Sbjct: 421 LGSASQSYSHTTRASPAT 438
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 66.2 bits (160), Expect = 6e-11
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASST 132
+G GGG SGGG GS G G G +N + + ++S S GG G S+GG +S
Sbjct: 235 SGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG 294
Query: 133 PINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKP 171
+GS SS SS+ SSS + S + P KP
Sbjct: 295 GSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKP 333
Score = 62.4 bits (150), Expect = 9e-10
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 71 TSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
T+ G GGGS GG SG+ G G G + N ++ + SG GG S G S
Sbjct: 230 TNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGS 289
Query: 131 STPINASTGSSSSSSS-SSSSSSSSSSSSSSSSSCGPLPG 169
S S G S S SS SS+ SSS + S G PG
Sbjct: 290 SGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPG 329
Score = 56.2 bits (134), Expect = 7e-08
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 31 TSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGG--GS 88
T+T A + P ++ P P S ++ S GG G GS G G G
Sbjct: 206 TNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSS---NSGGGSGSQSGSSGSGSNGD 262
Query: 89 SGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
+ NG GG GS+ + +S GS G GG G SS +STGSSS + S
Sbjct: 263 NNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSW--GSSTGSSSGNHGGS 320
Query: 149 SSSS 152
+
Sbjct: 321 GGGN 324
Score = 53.5 bits (127), Expect = 4e-07
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 72 STGGGGGGGGSGG-GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
S+ G GG SGG GGSSGN GG G G + + +S+G+ GG GG G
Sbjct: 272 SSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGG-GNGHKPGC 330
Query: 131 STPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
P N + GS S SS+ +S +S G
Sbjct: 331 EKPGNEARGSGESGIQGFRGQGVSSNMRNSETSPG 365
Score = 52.8 bits (125), Expect = 7e-07
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS---------------GGG 118
G G G G G GG GG G+N +A GS G
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 119 GGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
GGG S GG + S ++ +GS+ +++ SSS SSS SSS SS G G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGG 288
Score = 51.2 bits (121), Expect = 2e-06
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 41/139 (29%)
Query: 72 STGG-GGGGGGSGGG----------GGSSGNGG--------GGGGGGGGSNCNPNLAAA- 111
S GG GG G G+ GG G S+G+ G G GG GG N N A
Sbjct: 153 SQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAV 212
Query: 112 ---------------------SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
+GSGGG G G S + + S G +++ SSS S
Sbjct: 213 AQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGS 272
Query: 151 SSSSSSSSSSSSSCGPLPG 169
SS SSS SS S G G
Sbjct: 273 SSGSSSGGSSGGSSGGSSG 291
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 66.2 bits (160), Expect = 6e-11
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 73 TGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASST 132
+G GGG SGGG GS G G G +N + + ++S S GG G S+GG +S
Sbjct: 235 SGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSG 294
Query: 133 PINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPGKP 171
+GS SS SS+ SSS + S + P KP
Sbjct: 295 GSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKP 333
Score = 62.4 bits (150), Expect = 9e-10
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 71 TSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
T+ G GGGS GG SG+ G G G + N ++ + SG GG S G S
Sbjct: 230 TNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGS 289
Query: 131 STPINASTGSSSSSSS-SSSSSSSSSSSSSSSSSCGPLPG 169
S S G S S SS SS+ SSS + S G PG
Sbjct: 290 SGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPG 329
Score = 56.2 bits (134), Expect = 7e-08
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 7/124 (5%)
Query: 31 TSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGG--GS 88
T+T A + P ++ P P S ++ S GG G GS G G G
Sbjct: 206 TNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSS---NSGGGSGSQSGSSGSGSNGD 262
Query: 89 SGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSS 148
+ NG GG GS+ + +S GS G GG G SS +STGSSS + S
Sbjct: 263 NNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSW--GSSTGSSSGNHGGS 320
Query: 149 SSSS 152
+
Sbjct: 321 GGGN 324
Score = 52.8 bits (125), Expect = 7e-07
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS---------------GGG 118
G G G G G GG GG G+N +A GS G
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 119 GGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
GGG S GG + S ++ +GS+ +++ SSS SSS SSS SS G G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGG 288
Score = 51.2 bits (121), Expect = 2e-06
Identities = 45/139 (32%), Positives = 54/139 (38%), Gaps = 41/139 (29%)
Query: 72 STGG-GGGGGGSGGG----------GGSSGNGG--------GGGGGGGGSNCNPNLAAA- 111
S GG GG G G+ GG G S+G+ G G GG GG N N A
Sbjct: 153 SQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAV 212
Query: 112 ---------------------SNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSS 150
+GSGGG G G S + + S G +++ SSS S
Sbjct: 213 AQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGS 272
Query: 151 SSSSSSSSSSSSSCGPLPG 169
SS SSS SS S G G
Sbjct: 273 SSGSSSGGSSGGSSGGSSG 291
Score = 50.1 bits (118), Expect = 5e-06
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 72 STGGGGGGGGSGG-GGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVAS 130
S+ G GG SGG GGSSGN GG G G + + +S+G+ GG GG G
Sbjct: 272 SSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGG-GNGHKPGC 330
Query: 131 STPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
P N + GS S SS+ S L G
Sbjct: 331 EKPGNEARGSGESGIQGFRGQGVSSNMREISKEGNRLLG 369
Score = 41.2 bits (95), Expect = 0.002
Identities = 38/145 (26%), Positives = 59/145 (40%), Gaps = 22/145 (15%)
Query: 23 SASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGS 82
S S SG++ S S+ ++ S G +S S++ ++ +S G G GGS
Sbjct: 248 SGSQSGSSGSGSNGDNNNGSSSGGSSSG-----------SSSGGSSGGSSGGSSGNSGGS 296
Query: 83 GGGGGS---------SGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISA--GGGVASS 131
G GS S +G GG GGG + + G G GI G GV+S+
Sbjct: 297 RGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSGESGIQGFRGQGVSSN 356
Query: 132 TPINASTGSSSSSSSSSSSSSSSSS 156
+ G+ S + +S +S
Sbjct: 357 MREISKEGNRLLGGSGDNYRNSETS 381
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 66.2 bits (160), Expect = 6e-11
Identities = 69/209 (33%), Positives = 90/209 (43%), Gaps = 29/209 (13%)
Query: 3 VPAALIPPTQ-LVPPQPPI--STSASSSGTTTSTSSA------TSSPAPSIG------PP 47
VP+A ++ L+ P+ S S SS T+TSSA S PAP + PP
Sbjct: 2451 VPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPP 2510
Query: 48 ASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSN---- 103
AS+G +P +A+ A +S+ S SS + G S
Sbjct: 2511 ASTGAQ--QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSL 2568
Query: 104 -CNPNLAAASNGSGGGGGGISAGGG-VASSTPI------NASTGSSSSSSSSSSSSSSSS 155
P +A S + G TP ++S+ SSSSSSSSSSSSSSSS
Sbjct: 2569 PVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS 2628
Query: 156 SSSSSSSSCGPLPGKPVYSTPSPVENTPQ 184
SSSSSSSS S+PSP + PQ
Sbjct: 2629 SSSSSSSSSSSSSSSSSSSSPSPAKPGPQ 2657
Score = 65.5 bits (158), Expect = 1e-10
Identities = 49/149 (32%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 15 PPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTG 74
PP P + +S + +S +P+ S+ PPA P P P A + + + T
Sbjct: 2410 PPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPR--SPVPSAFSDQSRCLIAQTT 2467
Query: 75 GGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPI 134
G G ++ G G S P + + G G +A+ P
Sbjct: 2468 PVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPA 2527
Query: 135 NASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
SSSSSSSSSSSSSSSSSSSSSSSS
Sbjct: 2528 KERRSSSSSSSSSSSSSSSSSSSSSSSSS 2556
Score = 29.6 bits (65), Expect = 6.7
Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 14/91 (15%)
Query: 111 ASNGSGGGGGGISAGGGVASSTPINASTGSSSSSS-------SSSSSSSSSSSSSSSSSS 163
AS G G S G ++ P + T + SS S++ S S SS
Sbjct: 299 ASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSS 358
Query: 164 CGPLPGKPVY-------STPSPVENTPQNNE 187
GP P P +P P+ TP + E
Sbjct: 359 TGPEPPAPTPLLAERHGGSPQPLATTPLSQE 389
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 65.9 bits (159), Expect = 8e-11
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 20 ISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGG--GG 77
+S SS+ T + TSS SS ++ A+ G + R ++ ++ +GG G
Sbjct: 491 MSGDLSSNVTVSVTSSTISS---NVASKAAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSG 547
Query: 78 GGGGSGGGG----GSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTP 133
GGSGGGG G G+GGG GG G + + + G G GGG S+GGG +
Sbjct: 548 SRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSS 607
Query: 134 INASTGSSSSSSSSSSSSSSSSSSSSSSSS 163
GS SSS SS + SS + S
Sbjct: 608 SGGGYGSGGGGSSSVKGSSGEAFGSSVTFS 637
Score = 62.0 bits (149), Expect = 1e-09
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGG-----GGSNCNPNLAAASNGS 115
++ ++ A+ + GG GG G S GGG SSG+ G GG GGS +++ GS
Sbjct: 506 STISSNVASKAAFGGSGGRGSSSGGGYSSGSSSYGSGGRQSGSRGGSGGGGSISGGGYGS 565
Query: 116 GGGGGG-ISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
GGG GG +GGG + GS SS S SSS S G
Sbjct: 566 GGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGG 616
Score = 52.8 bits (125), Expect = 7e-07
Identities = 33/103 (32%), Positives = 42/103 (40%)
Query: 26 SSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGG 85
S G+ STSS + G G + + +++ GGGGG G +GG
Sbjct: 30 SGGSRRSTSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGFGAAGGF 89
Query: 86 GGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGV 128
GG G GGG GGGS + GG GG GGV
Sbjct: 90 GGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGV 132
Score = 51.2 bits (121), Expect = 2e-06
Identities = 37/107 (34%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 21 STSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGG 80
S SA SG + ++S+ S + G G F + + S GGGGG
Sbjct: 24 SGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGGTKSISISVAGGGGGF 83
Query: 81 GSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGG 127
G+ GG G G G GGG GG S SGGG GG GGG
Sbjct: 84 GAAGGFGGRGGGFGGGSSFGG---------GSGFSGGGFGGGGFGGG 121
Score = 48.5 bits (114), Expect = 1e-05
Identities = 27/61 (44%), Positives = 27/61 (44%)
Query: 66 AAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAG 125
AA GGG GGG S GGG GG GGGG GG G GG GG G
Sbjct: 85 AAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGVGGLGGPGGFGPG 144
Query: 126 G 126
G
Sbjct: 145 G 145
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/80 (40%), Positives = 36/80 (45%), Gaps = 24/80 (30%)
Query: 72 STGGGGGGGGSGG--------GGGS----------SGNGGGGGGGGGGSNCNPNLA---- 109
S G GGGGGG G GGS S +GGGGGG GGG + +L
Sbjct: 9 SRGRGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGG 68
Query: 110 --AASNGSGGGGGGISAGGG 127
+ S GGGGG A GG
Sbjct: 69 TKSISISVAGGGGGFGAAGG 88
Score = 43.1 bits (100), Expect = 6e-04
Identities = 25/53 (47%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 74 GGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG 126
GG GGGSG GG G GG GGG GG P G GG G G GG
Sbjct: 98 GGSSFGGGSGFSGGGFGGGGFGGGRFGGFG-GPGGVGGLGGPGGFGPGGYPGG 149
Score = 41.6 bits (96), Expect = 0.002
Identities = 34/125 (27%), Positives = 40/125 (32%), Gaps = 29/125 (23%)
Query: 74 GGGGGG------------GGS-------------GGGGGSSGNGGGGG----GGGGGSNC 104
GGGGGG GGS GGGGG G GG G G GG +
Sbjct: 13 GGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGGTKSI 72
Query: 105 NPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
+ ++A G G GG GGG + +G S
Sbjct: 73 SISVAGGGGGFGAAGGFGGRGGGFGGGSSFGGGSGFSGGGFGGGGFGGGRFGGFGGPGGV 132
Query: 165 GPLPG 169
G L G
Sbjct: 133 GGLGG 137
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 7/93 (7%)
Query: 80 GGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGG-------GVASST 132
G GGGGG G G GGS + + + + GGGGGG GG G+ +
Sbjct: 11 GRGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGGFGGGGFGSRSLVGLGGTK 70
Query: 133 PINASTGSSSSSSSSSSSSSSSSSSSSSSSSCG 165
I+ S ++ SS G
Sbjct: 71 SISISVAGGGGGFGAAGGFGGRGGGFGGGSSFG 103
Score = 35.4 bits (80), Expect = 0.12
Identities = 25/91 (27%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 79 GGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINAST 138
G G GGGG + G GG + + S GGGGG GGG S +
Sbjct: 11 GRGGGGGGFRGFSSGSAVVSGGSRRSTSSFSCLSRHGGGGGG---FGGGGFGSRSLVGLG 67
Query: 139 GSSSSSSSSSSSSSSSSSSSSSSSSCGPLPG 169
G+ S S S + ++ G G
Sbjct: 68 GTKSISISVAGGGGGFGAAGGFGGRGGGFGG 98
>gi|70995235 AMMECR1 protein isoform 2 [Homo sapiens]
Length = 296
Score = 65.5 bits (158), Expect = 1e-10
Identities = 47/116 (40%), Positives = 55/116 (47%), Gaps = 27/116 (23%)
Query: 73 TGGGGGGGGSG-----------------GGGGSSGNGGGG-GGGGGGSNCNPNLAAASNG 114
+G GGGGG S GG G+ NG GG GGG GS C + G
Sbjct: 19 SGSGGGGGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCT---LSPPQG 75
Query: 115 SGGGGGGI------SAGGGVASSTPINASTGSSSSSSSSSSSSSSSSSSSSSSSSC 164
GGGGGGI S G G STP A++ S SSSS++SSSS S S+ C
Sbjct: 76 CGGGGGGIALSPPPSCGVGTLLSTPAAATSSSPSSSSAASSSSPGSRKMVVSAEMC 131
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,788,755
Number of Sequences: 37866
Number of extensions: 1461633
Number of successful extensions: 78319
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 1161
Number of HSP's that attempted gapping in prelim test: 21431
Number of HSP's gapped (non-prelim): 24819
length of query: 504
length of database: 18,247,518
effective HSP length: 107
effective length of query: 397
effective length of database: 14,195,856
effective search space: 5635754832
effective search space used: 5635754832
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.