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Search of human proteins with 183227675
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|183227675 transmembrane protein 72 [Homo sapiens]
(275 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|183227675 transmembrane protein 72 [Homo sapiens] 550 e-157
gi|187608767 E74-like factor 4 [Homo sapiens] 33 0.35
gi|4503555 E74-like factor 4 [Homo sapiens] 33 0.35
gi|13236557 chromosome 7 open reading frame 23 [Homo sapiens] 30 1.8
gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens] 30 1.8
gi|186928819 hepatoma-derived growth factor isoform b [Homo sapi... 30 3.0
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 30 3.0
gi|4503357 docking protein 1 [Homo sapiens] 29 3.9
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 29 3.9
gi|47578107 delangin isoform B [Homo sapiens] 29 3.9
gi|47578105 delangin isoform A [Homo sapiens] 29 3.9
gi|8922116 hypothetical protein LOC11094 isoform a [Homo sapiens] 29 5.1
gi|13186251 fibroblast growth factor receptor 1 isoform 2 precur... 29 5.1
gi|169234807 histone deacetylase 7 isoform a [Homo sapiens] 29 5.1
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens] 29 5.1
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens] 29 5.1
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens] 29 5.1
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 29 5.1
gi|46409302 NIPA-like domain containing 1 [Homo sapiens] 29 5.1
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 29 5.1
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 29 5.1
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 29 5.1
gi|9966851 cysteinyl leukotriene receptor 2 [Homo sapiens] 28 6.7
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 28 6.7
gi|51317366 myosin XVIIIB [Homo sapiens] 28 6.7
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 28 6.7
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 28 6.7
gi|13186249 fibroblast growth factor receptor 1 isoform 9 precur... 28 8.7
gi|105990522 fibroblast growth factor receptor 1 isoform 1 precu... 28 8.7
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa... 28 8.7
>gi|183227675 transmembrane protein 72 [Homo sapiens]
Length = 275
Score = 550 bits (1418), Expect = e-157
Identities = 275/275 (100%), Positives = 275/275 (100%)
Query: 1 MQLQVFWTGLEYTCRLLGITTAAVLIGVGTETFLQGQFKSLAFYLLFTGAAVSICEGAYF 60
MQLQVFWTGLEYTCRLLGITTAAVLIGVGTETFLQGQFKSLAFYLLFTGAAVSICEGAYF
Sbjct: 1 MQLQVFWTGLEYTCRLLGITTAAVLIGVGTETFLQGQFKSLAFYLLFTGAAVSICEGAYF 60
Query: 61 VAQLLAICFQCQPGSLADRVREKAHWLGCFQKFLAYLLLSVACFLHPVLVWHVTIPGSML 120
VAQLLAICFQCQPGSLADRVREKAHWLGCFQKFLAYLLLSVACFLHPVLVWHVTIPGSML
Sbjct: 61 VAQLLAICFQCQPGSLADRVREKAHWLGCFQKFLAYLLLSVACFLHPVLVWHVTIPGSML 120
Query: 121 IITGLAYFLLSKRKKRKAAPEVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPS 180
IITGLAYFLLSKRKKRKAAPEVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPS
Sbjct: 121 IITGLAYFLLSKRKKRKAAPEVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPS 180
Query: 181 SLFIHMKSILKGTKKPSALQPPNTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLD 240
SLFIHMKSILKGTKKPSALQPPNTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLD
Sbjct: 181 SLFIHMKSILKGTKKPSALQPPNTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLD 240
Query: 241 DGDSEPEETTSDTTPIIPPPQAPLFLSSLTATGLF 275
DGDSEPEETTSDTTPIIPPPQAPLFLSSLTATGLF
Sbjct: 241 DGDSEPEETTSDTTPIIPPPQAPLFLSSLTATGLF 275
>gi|187608767 E74-like factor 4 [Homo sapiens]
Length = 663
Score = 32.7 bits (73), Expect = 0.35
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 10/106 (9%)
Query: 113 VTIPGSMLIITGLAYFLLSKRKKRKAAPEVL-----ASPEQYTDPSSSAVSTTGSGDTEQ 167
V PG+ LI++GL L + AP + A P + A SG T
Sbjct: 474 VAAPGAPLILSGLPQLLAGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAA 533
Query: 168 TYTFHGALKEGPSSLFIHMKSILKGTKKPSALQPPNTLMELSLEPA 213
+KEGP +++ ++ G L P TL EL + A
Sbjct: 534 P-----RVKEGPLRSSSYVQGMVTGAPMEGLLVPEETLRELLRDQA 574
>gi|4503555 E74-like factor 4 [Homo sapiens]
Length = 663
Score = 32.7 bits (73), Expect = 0.35
Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 10/106 (9%)
Query: 113 VTIPGSMLIITGLAYFLLSKRKKRKAAPEVL-----ASPEQYTDPSSSAVSTTGSGDTEQ 167
V PG+ LI++GL L + AP + A P + A SG T
Sbjct: 474 VAAPGAPLILSGLPQLLAGANRPTNPAPPTVTGAGPAGPSSQPPGTVIAAFIRTSGTTAA 533
Query: 168 TYTFHGALKEGPSSLFIHMKSILKGTKKPSALQPPNTLMELSLEPA 213
+KEGP +++ ++ G L P TL EL + A
Sbjct: 534 P-----RVKEGPLRSSSYVQGMVTGAPMEGLLVPEETLRELLRDQA 574
>gi|13236557 chromosome 7 open reading frame 23 [Homo sapiens]
Length = 118
Score = 30.4 bits (67), Expect = 1.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 14 CRLLGITTAAVLIGVGTETFLQGQFKSLAFYLLFTGAAVSICEGAYF 60
C L TA +LI + L+ +F+ L +Y++F+ + IC YF
Sbjct: 67 CISLSSITACILIYWYRQGDLEPKFRKLIYYIIFSIIMLCICANLYF 113
>gi|55770902 opioid growth factor receptor-like 1 [Homo sapiens]
Length = 451
Score = 30.4 bits (67), Expect = 1.8
Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 33/172 (19%)
Query: 101 VACFLHPVLVWHVTIPGSMLIITGLAYFLLSKRKKRKAAPEVLASPEQYTDPSSSAV--- 157
V LH LV + TIP + + L YF+ + R +R+ + + + YT PS + +
Sbjct: 259 VKFILHEALVEN-TIPN--IKQSALEYFVYTIRDRRERRKLLRFAQKHYT-PSENFIWGP 314
Query: 158 ---------------STTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKKPSALQPP 202
S S QT A SS +H+ S KK + +P
Sbjct: 315 PRKEQSEGSKAQKMSSPLASSHNSQTSMHKKAKDSKNSSSAVHLNSKTAEDKKVAPKEPV 374
Query: 203 NTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTT 254
S EP++ AK + + N AE + +S+PE+T + T
Sbjct: 375 EETDRPSPEPSNEAAKPRNTEKDSN--------AENM---NSQPEKTVTTPT 415
>gi|186928819 hepatoma-derived growth factor isoform b [Homo
sapiens]
Length = 256
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 120 LIITGLAYFLLSKRKKRKAAPEV-LASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALKEG 178
L+ T L FLLSK +R P+V A+P + +AV +T + + H G
Sbjct: 16 LLATKLKRFLLSKGGRRAQIPDVSRATPHTIDEMPEAAVKSTANKYQVFFFGTHETAFLG 75
Query: 179 PSSLFIHMKS 188
P LF + +S
Sbjct: 76 PKDLFPYEES 85
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 29.6 bits (65), Expect = 3.0
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 21/142 (14%)
Query: 149 YTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGT-----KKPSALQPPN 203
Y+ P S +ST G++ Q Y + + + + ++ L T K + L P N
Sbjct: 2662 YSLPPSPLISTEDGGESPQKYIYFDYPSLPLTKIDLSSENELASTVSTPVSKTAELSPKN 2721
Query: 204 TLM-------------ELSLEPADSLAKKKQVHF-EDNLVRIVPSLAEGLDDGDSEPEET 249
L L+ PA++ + + F E + + S A D+G++E E T
Sbjct: 2722 LLSPSSFKAECSEDVENLNAPPAEAGYDQNKTDFDETSSINTAISDATTGDEGNTEMEST 2781
Query: 250 TSDTTPIIP--PPQAPLFLSSL 269
T + + P P+ P L +L
Sbjct: 2782 TGSSGDVKPALSPKEPKTLDTL 2803
>gi|4503357 docking protein 1 [Homo sapiens]
Length = 481
Score = 29.3 bits (64), Expect = 3.9
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 17/133 (12%)
Query: 149 YTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKK------PSALQP- 201
Y+DP S + G G + + + L +K+ L K+ P L P
Sbjct: 315 YSDPLDSTSAQAGEGVQRKKPLYWDLYEHAQQQL---LKAKLTDPKEDPIYDEPEGLAPV 371
Query: 202 -PNTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPP 260
P L +L EP D+ + +V E + P+ DD P +T + P P
Sbjct: 372 PPQGLYDLPREPKDAWWCQARVKEEGYELPYNPAT----DDYAVPPPRSTKPL--LAPKP 425
Query: 261 QAPLFLSSLTATG 273
Q P F TATG
Sbjct: 426 QGPAFPEPGTATG 438
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 29.3 bits (64), Expect = 3.9
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 158 STTGSGDTEQTYTFHGALKEGPSSLFIHMKSIL------KGTKKPSALQPPNTLMELSLE 211
S+ G D E+ FH PSSL ++S +G K + PP L +++
Sbjct: 113 SSDGESDEEEFQGFHSDEDVAPSSLRSALRSQRGRAPRGRGRKHKTTPLPPPRLADVAPT 172
Query: 212 PADSLAKKKQVHFEDNLVRIVPSLAE 237
P + A+K+ E+ R+V +L E
Sbjct: 173 PPKTPARKRG---EEGTERMVQALTE 195
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 29.3 bits (64), Expect = 3.9
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 94 LAYLLLSVACFLH-----PVLVWH-----VTIPGSMLIITGLAYFLLSKRKKRKAAP--- 140
L Y+ ++ACF + P+ + H +++ GS L+ + + KRK+RK++P
Sbjct: 2428 LLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKRKERKSSPSKE 2487
Query: 141 -EVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALK 176
E S E+ + P S D++ + +K
Sbjct: 2488 NESSDSEEEVSRPRKSRKRVDSDSDSDSEDDINSVMK 2524
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 29.3 bits (64), Expect = 3.9
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 94 LAYLLLSVACFLH-----PVLVWH-----VTIPGSMLIITGLAYFLLSKRKKRKAAP--- 140
L Y+ ++ACF + P+ + H +++ GS L+ + + KRK+RK++P
Sbjct: 2428 LLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKRKERKSSPSKE 2487
Query: 141 -EVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALK 176
E S E+ + P S D++ + +K
Sbjct: 2488 NESSDSEEEVSRPRKSRKRVDSDSDSDSEDDINSVMK 2524
>gi|8922116 hypothetical protein LOC11094 isoform a [Homo sapiens]
Length = 172
Score = 28.9 bits (63), Expect = 5.1
Identities = 33/127 (25%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 12 YTCRLLGITTAAVLIGVGTETFLQGQFKSLAFYLLFTGAAVSICEGAYFVAQLLAICFQC 71
+ CRL G+ A + G F + + L A V + A F+ L F C
Sbjct: 29 WLCRLSGVLGAV-------SCAISGLFNCITIHPLNIAAGVWMIMNA-FILLLCEAPFCC 80
Query: 72 QPGSLADRVREKAHWLGCFQKFLAYLLLSVACFLHPVLVWHVTIPGSMLIITGLAYFLLS 131
Q A+ V EK L +QK + Y ++V + L + ++ TG+ Y L +
Sbjct: 81 QFIEFANTVAEKVDRLRSWQKAVFYCGMAVVPIVIS-LTLTTLLGNAIAFATGVLYGLSA 139
Query: 132 KRKKRKA 138
KK A
Sbjct: 140 LGKKGDA 146
>gi|13186251 fibroblast growth factor receptor 1 isoform 2 precursor
[Homo sapiens]
Length = 820
Score = 28.9 bits (63), Expect = 5.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 223 HFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAPLFLS 267
+F N+ +PS + DD DS EE +D T P P AP + S
Sbjct: 113 YFSVNVSDALPSSEDDDDDDDSSSEEKETDNTK--PNPVAPYWTS 155
>gi|169234807 histone deacetylase 7 isoform a [Homo sapiens]
Length = 991
Score = 28.9 bits (63), Expect = 5.1
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 22/134 (16%)
Query: 134 KKRKAAPEVLASP-EQYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKG 192
+K A P + P E D S S+ ST SG + + HG S + + L+
Sbjct: 217 RKESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEHGPNPILGSEALLGQRLRLQE 276
Query: 193 TKKPSALQPPNTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSD 252
T P L +SL PA +L +P+ A D D T
Sbjct: 277 TSVA-----PFALPTVSLLPAITLG--------------LPAPARA--DSDRRTHPTLGP 315
Query: 253 TTPIIPPPQAPLFL 266
PI+ P PLFL
Sbjct: 316 RGPILGSPHTPLFL 329
>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 28.9 bits (63), Expect = 5.1
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 11/118 (9%)
Query: 149 YTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKKPSALQP---PNTL 205
+ DP ++ ++ G D+E+ T + ++ S + + + K + P L P P
Sbjct: 235 FDDPDAAELNPFGDPDSEEPITETASPRKTEDSFYNNSYNPFKEVQTPQYLNPFDEPEAF 294
Query: 206 MELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAP 263
+ + P S +K +R V D EE ++ P P P
Sbjct: 295 VTIKDSPPQSTKRKN--------IRPVDMSKYLYADSSKTEEEELDESNPFYEPKSTP 344
>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 28.9 bits (63), Expect = 5.1
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 11/118 (9%)
Query: 149 YTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKKPSALQP---PNTL 205
+ DP ++ ++ G D+E+ T + ++ S + + + K + P L P P
Sbjct: 235 FDDPDAAELNPFGDPDSEEPITETASPRKTEDSFYNNSYNPFKEVQTPQYLNPFDEPEAF 294
Query: 206 MELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAP 263
+ + P S +K +R V D EE ++ P P P
Sbjct: 295 VTIKDSPPQSTKRKN--------IRPVDMSKYLYADSSKTEEEELDESNPFYEPKSTP 344
>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
Length = 1196
Score = 28.9 bits (63), Expect = 5.1
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 11/118 (9%)
Query: 149 YTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKKPSALQP---PNTL 205
+ DP ++ ++ G D+E+ T + ++ S + + + K + P L P P
Sbjct: 235 FDDPDAAELNPFGDPDSEEPITETASPRKTEDSFYNNSYNPFKEVQTPQYLNPFDEPEAF 294
Query: 206 MELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAP 263
+ + P S +K +R V D EE ++ P P P
Sbjct: 295 VTIKDSPPQSTKRKN--------IRPVDMSKYLYADSSKTEEEELDESNPFYEPKSTP 344
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 28.9 bits (63), Expect = 5.1
Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 11/118 (9%)
Query: 149 YTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKKPSALQP---PNTL 205
+ DP ++ ++ G D+E+ T + ++ S + + + K + P L P P
Sbjct: 270 FDDPDAAELNPFGDPDSEEPITETASPRKTEDSFYNNSYNPFKEVQTPQYLNPFDEPEAF 329
Query: 206 MELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAP 263
+ + P S +K +R V D EE ++ P P P
Sbjct: 330 VTIKDSPPQSTKRKN--------IRPVDMSKYLYADSSKTEEEELDESNPFYEPKSTP 379
>gi|46409302 NIPA-like domain containing 1 [Homo sapiens]
Length = 410
Score = 28.9 bits (63), Expect = 5.1
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 141 EVLASPEQYTDPSSSAVSTTGSGDTEQTYTFH-GALKEGPSSLFIHMKSILK 191
++LASP YTD + S + + S + E Y+ + G + SS+FI ILK
Sbjct: 38 QLLASPVLYTDLNYSINNLSISANVENKYSLYVGLVLAVSSSIFIGSSFILK 89
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 28.9 bits (63), Expect = 5.1
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 194 KKPSALQPPNTLMELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDT 253
KK ++ P T E+ E + + QV+ +D+ S+ EG+ GD P E + +T
Sbjct: 1857 KKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQ----DSIGEGVTQGDYTPMEDSEET 1912
Query: 254 TPIIPPPQAPLFLSSLTAT 272
+ + PL T T
Sbjct: 1913 SQSLQIDLGPLQSDQQTTT 1931
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 28.9 bits (63), Expect = 5.1
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 225 EDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAP 263
E L+ VP A D D EP D P PPP AP
Sbjct: 8 EPGLLSDVPKFASWGDGEDDEPRSDKGDAPP--PPPPAP 44
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 28.9 bits (63), Expect = 5.1
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Query: 138 AAPEVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILKGTKKPS 197
+AP+ + T+PS+ + GD + TFHG ++ PSS +
Sbjct: 777 SAPQEATEGSKVTEPSAPCQALVSIGDLQA--TFHG-IRSAPSSSDSATRDPSTSVPASG 833
Query: 198 ALQPPNTLM-ELSLEP 212
A QPP T E S EP
Sbjct: 834 AHQPPQTTEGEKSPEP 849
>gi|9966851 cysteinyl leukotriene receptor 2 [Homo sapiens]
Length = 346
Score = 28.5 bits (62), Expect = 6.7
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 74 GSLADRVREKAHWLGCFQKFLAYLLLSVACFL---HPVLVWHVTIPGSMLIITGLAYFLL 130
G LA R+ + ++ + +LSV FL HP + HVT S I+ G+ + L+
Sbjct: 107 GDLACRIMSYSLYVNMYSSIYFLTVLSVVRFLAMVHPFRLLHVTSIRSAWILCGIIWILI 166
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 28.5 bits (62), Expect = 6.7
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 16/129 (12%)
Query: 148 QYTDPS--SSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSIL-----KGTKKPSALQ 200
Q T P+ S+A S T G EQ + +G K+ KGT P+AL+
Sbjct: 319 QTTAPATMSTAASGTTMGLVEQAKSLLNKKADGVKPQTNSTKNSAAATSPKGTLPPAALE 378
Query: 201 PPNTLMELSLEPADSLAKKKQ-----VHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTP 255
P T++ P D + + + ED VP + + G PE P
Sbjct: 379 PQTTVIH---NPVDGIKESSDSANTTIEDEDAKAPRVPDILSSVRRGSGAPEAEGPLPCP 435
Query: 256 IIPPPQAPL 264
P P +PL
Sbjct: 436 -SPAPFSPL 443
>gi|51317366 myosin XVIIIB [Homo sapiens]
Length = 2567
Score = 28.5 bits (62), Expect = 6.7
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 132 KRKKRKAAPEVLASPEQYTDPSSSAVSTTGSGDTEQTYTFHGALKEGPSSLFIHMKSILK 191
+RK + + L + + P+S A S G D Q + H +E S +K+ILK
Sbjct: 2434 ERKTKVDFDDFLPAIRKPQTPTSLAGSAKGGQDGSQRSSIHFETEEANRSFLSGIKTILK 2493
Query: 192 GTKKPSALQPPNTLME--------LSLEPADSLAKK 219
K P + P L + +S + ADS+ +
Sbjct: 2494 --KSPEPKEDPAHLSDSSSSSGSIVSFKSADSIKSR 2527
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 28.5 bits (62), Expect = 6.7
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 109 LVWHVTIPGSMLIITGLAYFLLSKRKK-RKAAPEVLASPEQYTDPS--SSAVSTTGSGDT 165
+V V G ++++ LA LL++R+ R+ + P P+ S+A S GSG
Sbjct: 739 VVGGVCFLGVAVLVSILAGCLLNRRRAARRRRKRLRQDPPLIFSPTGKSAAPSALGSGSP 798
Query: 166 EQTYTFHGALKEGPSSLFIHMKSIL----KGTKKPSALQPPNTLMELSLEP--------- 212
+ LK S + +S+L GT P PP++ L LEP
Sbjct: 799 DSV----AKLKLQGSPVPSLRQSLLWGDPAGTPSPHP-DPPSSRGPLPLEPICRGPDGRF 853
Query: 213 --ADSLAKKKQVHFEDNLVRIVPS--LAEGLDDGDSEPEETTS-----DTTPIIPPPQAP 263
++A ++ + P+ LA D S P D +P+ PPP AP
Sbjct: 854 VMGPTVAAPQERSGREQAEPRTPAQRLARSFDCSSSSPSGAPQPLCIEDISPVAPPPAAP 913
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 28.5 bits (62), Expect = 6.7
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 30/180 (16%)
Query: 109 LVWHVTIPGSMLIITGLAYFLLSKRKK-RKAAPEVLASPEQYTDPS--SSAVSTTGSGDT 165
+V V G ++++ LA LL++R+ R+ + P P+ S+A S GSG
Sbjct: 723 VVGGVCFLGVAVLVSILAGCLLNRRRAARRRRKRLRQDPPLIFSPTGKSAAPSALGSGSP 782
Query: 166 EQTYTFHGALKEGPSSLFIHMKSIL----KGTKKPSALQPPNTLMELSLEP--------- 212
+ LK S + +S+L GT P PP++ L LEP
Sbjct: 783 DSV----AKLKLQGSPVPSLRQSLLWGDPAGTPSPHP-DPPSSRGPLPLEPICRGPDGRF 837
Query: 213 --ADSLAKKKQVHFEDNLVRIVPS--LAEGLDDGDSEPEETTS-----DTTPIIPPPQAP 263
++A ++ + P+ LA D S P D +P+ PPP AP
Sbjct: 838 VMGPTVAAPQERSGREQAEPRTPAQRLARSFDCSSSSPSGAPQPLCIEDISPVAPPPAAP 897
>gi|13186249 fibroblast growth factor receptor 1 isoform 9 precursor
[Homo sapiens]
Length = 785
Score = 28.1 bits (61), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 223 HFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAPLFLS 267
+F N+ +PS + DD DS EE +D T P AP + S
Sbjct: 113 YFSVNVSDALPSSEDDDDDDDSSSEEKETDNTKPNRMPVAPYWTS 157
>gi|105990522 fibroblast growth factor receptor 1 isoform 1
precursor [Homo sapiens]
Length = 822
Score = 28.1 bits (61), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 223 HFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPIIPPPQAPLFLS 267
+F N+ +PS + DD DS EE +D T P AP + S
Sbjct: 113 YFSVNVSDALPSSEDDDDDDDSSSEEKETDNTKPNRMPVAPYWTS 157
>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
sapiens]
Length = 987
Score = 28.1 bits (61), Expect = 8.7
Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 155 SAVSTTGSGDTEQTYT--------FHGALKEGPSSLFIHMKSILKGTKKPSALQPPNTLM 206
+A+ T+GS ++ T F E PS + K +K +A PN++
Sbjct: 226 NALRTSGSSSSDVTKASLSPDASDFEHITAETPSRPLSSTSNPFKSSKCSTAGSSPNSVS 285
Query: 207 ELSLEPADSLAKKKQVHFEDNLVRIVPSLAEGLDDGDSEPEETTSDTTPII 257
ELSL +K + + + +L E L D +E T++ ++
Sbjct: 286 ELSLASLTEKIQKMEENHHSTAEELQATLQE-LSDQQQMVQELTAENEKLV 335
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,246,883
Number of Sequences: 37866
Number of extensions: 516204
Number of successful extensions: 1953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1939
Number of HSP's gapped (non-prelim): 46
length of query: 275
length of database: 18,247,518
effective HSP length: 101
effective length of query: 174
effective length of database: 14,423,052
effective search space: 2509611048
effective search space used: 2509611048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.