Guide to the Human Genome
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Name: TMEM72 Sequence: fasta or formatted (275aa) NCBI GI: 183227675
Description:

transmembrane protein 72

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         24           2
 C cysteine            2.2          6           1
 D aspartate           3.3          9           2
 E glutamate           5.5         15           2
 F phenylalanine       5.8         16           1
 G glycine             6.9         19           1
 H histidine           2.2          6           1
 I isoleucine          4.4         12           2
 K lysine              5.5         15           3
 L leucine            14.2         39           3
 M methionine          1.5          4           1
 N asparagine          0.7          2           1
 P proline             6.5         18           3
 Q glutamine           4.7         13           1
 R arginine            2.2          6           1
 S serine              8.4         23           3
 T threonine           8.4         23           2
 V valine              5.5         15           1
 W tryptophan          1.1          3           1
 Y tyrosine            2.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 72 
ELF4                  0.015   E74-like factor 4 
ELF4                  0.015   E74-like factor 4 
C7orf23               0.010   chromosome 7 open reading frame 23 
OGFRL1                0.010   opioid growth factor receptor-like 1 
HDGF                  0.010   hepatoma-derived growth factor isoform b 
ZFHX4                 0.010   zinc finger homeodomain 4 
DOK1                  0.008   docking protein 1 
MLL4                  0.008   myeloid/lymphoid or mixed-lineage leukemia 4 
NIPBL                 0.008   delangin isoform B 
NIPBL                 0.008   delangin isoform A 
C9orf7                0.008   hypothetical protein LOC11094 isoform a 
FGFR1                 0.008   fibroblast growth factor receptor 1 isoform 2 precur...
HDAC7                 0.008   histone deacetylase 7 isoform a 
EHBP1                 0.008   EH domain binding protein 1 isoform 3 
EHBP1                 0.008   EH domain binding protein 1 isoform 3 
EHBP1                 0.008   EH domain binding protein 1 isoform 2 
EHBP1                 0.008   EH domain binding protein 1 isoform 1 
NIPAL1                0.008   NIPA-like domain containing 1 
TPR                   0.008   nuclear pore complex-associated protein TPR 
NEUROD2               0.008   neurogenic differentiation 2 
SAPS1                 0.008   SAPS domain family, member 1 
CYSLTR2               0.006   cysteinyl leukotriene receptor 2 
CAMK2B                0.006   calcium/calmodulin-dependent protein kinase II beta ...
MYO18B                0.006   myosin XVIIIB 
IGSF9                 0.006   immunoglobulin superfamily, member 9 isoform a [Hom...
IGSF9                 0.006   immunoglobulin superfamily, member 9 isoform b [Hom...
FGFR1                 0.006   fibroblast growth factor receptor 1 isoform 9 precur...
FGFR1                 0.006   fibroblast growth factor receptor 1 isoform 1 precu...
CYTSB                 0.006   spectrin domain with coiled-coils 1 NSP5a3b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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