HDGF 9968

Name: HDGF	Sequence: fasta or formatted (256aa)		NCBI GI: 186928819
Description: hepatoma-derived growth factor isoform b		Referenced in: Liver
Other entries for this name: alt prot [233aa] hepatoma-derived growth factor isoform c alt prot [240aa] hepatoma-derived growth factor isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 20 2 C cysteine 0.4 1 1 D aspartate 4.7 12 1 E glutamate 18.4 47 6 F phenylalanine 3.5 9 3 G glycine 9.0 23 2 H histidine 2.0 5 1 I isoleucine 2.0 5 1 K lysine 10.2 26 2 L leucine 6.6 17 2 M methionine 1.2 3 1 N asparagine 3.1 8 2 P proline 9.0 23 2 Q glutamine 2.7 7 1 R arginine 4.3 11 2 S serine 6.2 16 2 T threonine 3.9 10 1 V valine 3.5 9 1 W tryptophan 0.4 1 1 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hepatoma-derived growth factor isoform b HDGF 0.831 hepatoma-derived growth factor isoform c HDGF 0.821 hepatoma-derived growth factor isoform a HDGFL1 0.379 hepatoma derived growth factor-like 1 HDGFRP3 0.268 hepatoma-derived growth factor, related protein 3 [Ho... PSIP1 0.242 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.242 PC4 and SFRS1 interacting protein 1 isoform 1 [Homo... PSIP1 0.242 PC4 and SFRS1 interacting protein 1 isoform 2 HDGF2 0.210 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.210 hepatoma-derived growth factor-related protein 2 iso... RPGR 0.077 retinitis pigmentosa GTPase regulator isoform C [Hom... NEFH 0.052 neurofilament, heavy polypeptide 200kDa NSBP1 0.048 nucleosomal binding protein 1 N-PAC 0.048 cytokine-like nuclear factor n-pac SLC24A1 0.046 solute carrier family 24 (sodium/potassium/calcium ex... GTF2F1 0.044 general transcription factor IIF, polypeptide 1, 74... YTHDC1 0.044 splicing factor YT521-B isoform 2 YTHDC1 0.044 splicing factor YT521-B isoform 1 CASC3 0.044 metastatic lymph node 51 SMTNL1 0.042 smoothelin-like 1 SMARCC2 0.040 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.040 SWI/SNF-related matrix-associated actin-dependent re... SMARCC2 0.040 SWI/SNF-related matrix-associated actin-dependent r... CHGA 0.040 chromogranin A precursor PCDH15 0.040 protocadherin 15 isoform CD2-1 precursor RAD21 0.038 RAD21 homolog CHD2 0.038 chromodomain helicase DNA binding protein 2 isoform... CHD2 0.038 chromodomain helicase DNA binding protein 2 isoform... ATRX 0.038 transcriptional regulator ATRX isoform 2 ATRX 0.038 transcriptional regulator ATRX isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.