Guide to the Human Genome
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Name: CDCA5 Sequence: fasta or formatted (252aa) NCBI GI: 18087845
Description:

cell division cycle associated 5

Referenced in:

Additional Cell Cycle Functions
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         22           3
 C cysteine            1.2          3           1
 D aspartate           2.8          7           1
 E glutamate           9.9         25           1
 F phenylalanine       2.8          7           2
 G glycine             5.6         14           2
 H histidine           0.8          2           1
 I isoleucine          2.8          7           1
 K lysine              7.9         20           4
 L leucine             7.9         20           2
 M methionine          2.0          5           1
 N asparagine          1.2          3           1
 P proline            11.5         29           3
 Q glutamine           2.0          5           1
 R arginine            8.7         22           2
 S serine             11.1         28           3
 T threonine           5.6         14           1
 V valine              6.0         15           2
 W tryptophan          1.2          3           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle associated 5 
SFRS2IP               0.036   splicing factor, arginine/serine-rich 2, interactin...
MAVS                  0.027   virus-induced signaling adapter 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
LOC100129852          0.025   PREDICTED: hypothetical protein 
LOC100129852          0.025   PREDICTED: hypothetical protein 
LOC100129852          0.025   PREDICTED: hypothetical protein 
MYO15A                0.021   myosin XV 
SRRM1                 0.021   serine/arginine repetitive matrix 1 
ZNF207                0.021   zinc finger protein 207 isoform b 
ROBO1                 0.021   roundabout 1 isoform d 
ROBO1                 0.021   roundabout 1 isoform c 
ROBO1                 0.021   roundabout 1 isoform b 
ROBO1                 0.021   roundabout 1 isoform a 
NACA                  0.021   nascent polypeptide-associated complex alpha subuni...
LOC642132             0.019   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.019   PREDICTED: similar to roundabout 1 isoform 2 
EHBP1                 0.017   EH domain binding protein 1 isoform 3 
EHBP1                 0.017   EH domain binding protein 1 isoform 3 
EHBP1                 0.017   EH domain binding protein 1 isoform 2 
EHBP1                 0.017   EH domain binding protein 1 isoform 1 
PRG4                  0.017   proteoglycan 4 isoform D 
PRG4                  0.017   proteoglycan 4 isoform C 
PRG4                  0.017   proteoglycan 4 isoform B 
PRG4                  0.017   proteoglycan 4 isoform A 
FAM129A               0.017   niban protein isoform 2 
ZNF750                0.017   zinc finger protein 750 
MSL3                  0.017   male-specific lethal 3-like 1 isoform a 
MSL3                  0.017   male-specific lethal 3-like 1 isoform c 
MSL3                  0.017   male-specific lethal 3-like 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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