Guide to the Human Genome
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Name: MSL3 Sequence: fasta or formatted (355aa) NCBI GI: 17975761
Description:

male-specific lethal 3-like 1 isoform c

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Other entries for this name:
alt prot [416aa] male-specific lethal 3-like 1 isoform d
alt prot [462aa] male-specific lethal 3-like 1 isoform b
alt prot [521aa] male-specific lethal 3-like 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         24           2
 C cysteine            1.4          5           1
 D aspartate           3.4         12           2
 E glutamate           7.9         28           2
 F phenylalanine       4.2         15           2
 G glycine             2.3          8           1
 H histidine           3.7         13           3
 I isoleucine          4.5         16           2
 K lysine              7.0         25           2
 L leucine             9.9         35           2
 M methionine          1.7          6           1
 N asparagine          4.2         15           1
 P proline             9.6         34           4
 Q glutamine           3.7         13           2
 R arginine            6.2         22           2
 S serine              9.3         33           3
 T threonine           5.6         20           2
 V valine              4.2         15           1
 W tryptophan          0.3          1           1
 Y tyrosine            4.2         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   male-specific lethal 3-like 1 isoform c 
MSL3                  1.000   male-specific lethal 3-like 1 isoform a 
MSL3                  1.000   male-specific lethal 3-like 1 isoform b 
MSL3                  0.613   male-specific lethal 3-like 1 isoform d 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L2               0.037   mortality factor 4 like 2 
MORF4L1               0.036   MORF-related gene 15 isoform 2 
MORF4L1               0.036   MORF-related gene 15 isoform 1 
PELP1                 0.032   proline, glutamic acid and leucine rich protein 1 [...
SRRM2                 0.029   splicing coactivator subunit SRm300 
MORF4                 0.029   mortality factor 4 
CRKRS                 0.021   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.021   Cdc2-related kinase, arginine/serine-rich isoform 1...
ARHGEF5               0.020   rho guanine nucleotide exchange factor 5 
LOC100128719          0.019   PREDICTED: hypothetical protein, partial 
LOC100128719          0.019   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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