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Search of human proteins with 178057337
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|178057337 mohawk homeobox [Homo sapiens]
(352 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|178057337 mohawk homeobox [Homo sapiens] 714 0.0
gi|197100900 iroquois homeobox 2 [Homo sapiens] 84 2e-16
gi|39930475 iroquois homeobox 2 [Homo sapiens] 84 2e-16
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 81 1e-15
gi|42544241 iroquois homeobox protein 6 [Homo sapiens] 81 2e-15
gi|226371735 iroquois homeobox 3 [Homo sapiens] 80 4e-15
gi|7705555 iroquois homeobox 4 [Homo sapiens] 79 8e-15
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 78 1e-14
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 60 2e-09
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 60 2e-09
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 60 2e-09
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 60 2e-09
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 60 2e-09
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 60 2e-09
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 60 2e-09
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 60 2e-09
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 60 3e-09
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 57 2e-08
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 57 2e-08
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 57 2e-08
gi|4505151 Meis homeobox 1 [Homo sapiens] 56 4e-08
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 56 6e-08
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 53 4e-07
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 53 4e-07
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 53 4e-07
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 53 4e-07
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 53 4e-07
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 53 4e-07
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 53 4e-07
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 53 4e-07
>gi|178057337 mohawk homeobox [Homo sapiens]
Length = 352
Score = 714 bits (1843), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Query: 1 MNTIVFNKLSGAVLFEDGGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHR 60
MNTIVFNKLSGAVLFEDGGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHR
Sbjct: 1 MNTIVFNKLSGAVLFEDGGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHR 60
Query: 61 RTGARQNGGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNW 120
RTGARQNGGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNW
Sbjct: 61 RTGARQNGGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNW 120
Query: 121 FANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRTHMNEG 180
FANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRTHMNEG
Sbjct: 121 FANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRTHMNEG 180
Query: 181 GYNTPVHHPVIKSENSVIKAGVRPESRASEDYVAPPKYKSSLLNRYLNDSLRHVMATNTT 240
GYNTPVHHPVIKSENSVIKAGVRPESRASEDYVAPPKYKSSLLNRYLNDSLRHVMATNTT
Sbjct: 181 GYNTPVHHPVIKSENSVIKAGVRPESRASEDYVAPPKYKSSLLNRYLNDSLRHVMATNTT 240
Query: 241 MMGKTRQRNHSGSFSSNEFEEELVSPSSSETEGNFVYRTDTLENGSNKGESAANRKGPSK 300
MMGKTRQRNHSGSFSSNEFEEELVSPSSSETEGNFVYRTDTLENGSNKGESAANRKGPSK
Sbjct: 241 MMGKTRQRNHSGSFSSNEFEEELVSPSSSETEGNFVYRTDTLENGSNKGESAANRKGPSK 300
Query: 301 DDTYWKEINAAMALTNLAQGKDKLQGTTSCIIQKSSHIAEVKTVKVPLVQQF 352
DDTYWKEINAAMALTNLAQGKDKLQGTTSCIIQKSSHIAEVKTVKVPLVQQF
Sbjct: 301 DDTYWKEINAAMALTNLAQGKDKLQGTTSCIIQKSSHIAEVKTVKVPLVQQF 352
>gi|197100900 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 84.0 bits (206), Expect = 2e-16
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 73 HKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTV 132
+++ A +D LK WL +HR NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 117 YRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK--- 173
Query: 133 RQPDLSWALRIKLYNK-YVQGNAERLSVSSDDSCSEDGE 170
++ ++WA R K ++ +G+A R S D E E
Sbjct: 174 KENKMTWAPRNKSEDEDEDEGDATRSKDESPDKAQEGTE 212
>gi|39930475 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 84.0 bits (206), Expect = 2e-16
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 4/99 (4%)
Query: 73 HKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRLKNTV 132
+++ A +D LK WL +HR NPYPTK EKI+LA+ ++MTL QVS WFANARRRLK
Sbjct: 117 YRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLK--- 173
Query: 133 RQPDLSWALRIKLYNK-YVQGNAERLSVSSDDSCSEDGE 170
++ ++WA R K ++ +G+A R S D E E
Sbjct: 174 KENKMTWAPRNKSEDEDEDEGDATRSKDESPDKAQEGTE 212
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 81.3 bits (199), Expect = 1e-15
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
G +++ A +D LK WL +HR NPYPTK EKI+LA+ ++MTL QVS WFANARRRL
Sbjct: 112 GDPAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRL 171
Query: 129 KNTVRQPDLSWALRIKLYNKYVQGNAERLSVSSDDSCSEDGENPPRTHMNEGGYNTPVHH 188
K ++ ++W R + ++ + N + D+ + + P GG
Sbjct: 172 K---KENKMTWTPRNRSEDEEEEENIDLEKNDEDEPQKPEDKGDPE-GPEAGGAEQKAAS 227
Query: 189 PVIKSENSVIKAGVRPESRASE-DYVAPP 216
+ + AG E S+ D+ PP
Sbjct: 228 GCERLQGPPTPAGKETEGSLSDSDFKEPP 256
>gi|42544241 iroquois homeobox protein 6 [Homo sapiens]
Length = 446
Score = 80.9 bits (198), Expect = 2e-15
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Query: 50 PLKDNLG-LRHRRTGARQNGGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLAL 108
P + LG ++ R GA + G R K A ++ LK WL +HR NPYPTK EKI+LA+
Sbjct: 126 PYERTLGQYQYERYGAVELSGAGRRKN-ATRETTSTLKAWLNEHRKNPYPTKGEKIMLAI 184
Query: 109 GSQMTLVQVSNWFANARRRLKNTVRQPDLSWALRIK 144
++MTL QVS WFANARRRLK ++ ++WA + K
Sbjct: 185 ITKMTLTQVSTWFANARRRLK---KENKMTWAPKNK 217
>gi|226371735 iroquois homeobox 3 [Homo sapiens]
Length = 501
Score = 79.7 bits (195), Expect = 4e-15
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 20/137 (14%)
Query: 51 LKDNLGLRHRRTGA-------------RQNGGKVRHKRQALQDMARPLKQWLYKHRDNPY 97
LKD+ G++H A + G + A ++ LK WL +HR NPY
Sbjct: 95 LKDSPGVQHPAAAAAFPHPHPAFYPYGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPY 154
Query: 98 PTKTEKILLALGSQMTLVQVSNWFANARRRLKNTVRQPDLSWALRIKLYNKYVQGNAERL 157
PTK EKI+LA+ ++MTL QVS WFANARRRLK ++ ++WA R + +GNA
Sbjct: 155 PTKGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKMTWAPRSRTDE---EGNAYGS 208
Query: 158 SVSSDDSCSEDGENPPR 174
+D ED E+ R
Sbjct: 209 EREEEDE-EEDEEDGKR 224
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 78.6 bits (192), Expect = 8e-15
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 9/98 (9%)
Query: 61 RTGARQNGGKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNW 120
R G +G + ++ A ++ LK WL +HR NPYPTK EKI+LA+ ++MTL QVS W
Sbjct: 136 RYGTMDSGTR---RKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTW 192
Query: 121 FANARRRLKNTVRQPDLSWALRIKLYNK---YVQGNAE 155
FANARRRLK ++ ++W R K ++ Y +G E
Sbjct: 193 FANARRRLK---KENKMTWPPRNKCADEKRPYAEGEEE 227
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 77.8 bits (190), Expect = 1e-14
Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 21/123 (17%)
Query: 51 LKDNLGLRHRRTGARQNG-----------GKVRHKRQALQDMARPLKQWLYKHRDNPYPT 99
LKDN G+ H T A G + A ++ LK WL +HR NPYPT
Sbjct: 98 LKDNPGV-HPATFAAHTAPAYYPYGQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPT 156
Query: 100 KTEKILLALGSQMTLVQVSNWFANARRRLKNTVRQPDLSWALRIK------LYNKYVQGN 153
K EKI+LA+ ++MTL QVS WFANARRRLK ++ ++W R K L+ +G+
Sbjct: 157 KGEKIMLAIITKMTLTQVSTWFANARRRLK---KENKVTWGARSKDQEDGALFGSDTEGD 213
Query: 154 AER 156
E+
Sbjct: 214 PEK 216
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 163 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 222
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 34 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 14 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 14 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 14 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 14 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 73
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 34 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 93
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 60.5 bits (145), Expect = 2e-09
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK R + ++ + L+ WLY+HR N YP++ EK LL+ + ++ +QV NWF NARRRL
Sbjct: 48 GKRRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRL 107
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 60.1 bits (144), Expect = 3e-09
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 66 QNGGKVRHKRQALQDMA-RPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANA 124
Q+ G ++KR L A ++ WL++H +PYPT+ EK +A + +TL+QV+NWF NA
Sbjct: 254 QDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINA 313
Query: 125 RRRL 128
RRR+
Sbjct: 314 RRRI 317
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 57.4 bits (137), Expect = 2e-08
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 70 KVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
K + K + + L+ W+YKHR YP++ EK +L+ + ++L+Q+SNWF NARRR+
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRI 108
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 57.0 bits (136), Expect = 2e-08
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 70 KVRHKRQALQDMARPL-KQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
K ++KR L A + + WL++H +PYPT+ EK +A + +TL+QV+NWF NARRR+
Sbjct: 287 KSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRI 346
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 57.0 bits (136), Expect = 2e-08
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 69 GKVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
GK + + ++ + L+ WLY HR N YP++ EK+ L+ + ++++Q+ NWF NARRRL
Sbjct: 17 GKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARRRL 76
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 56.2 bits (134), Expect = 4e-08
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 19/97 (19%)
Query: 34 LDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQAL--QDMARPLKQWLYK 91
LD+ A P G D P KD K RHK++ + + ++ WL++
Sbjct: 251 LDNSVASPSTGDDDDPD-KD----------------KKRHKKRGIFPKVATNIMRAWLFQ 293
Query: 92 HRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 294 HLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 330
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 55.8 bits (133), Expect = 6e-08
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 70 KVRHKRQALQDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
K + K + + L+ W+YKHR YP++ EK +L+ + ++L+++SNWF NARRR+
Sbjct: 50 KKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRI 108
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 151 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 193
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 194 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 246
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 226 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 268
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 269 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 321
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 239 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 281
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 282 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 334
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 239 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 281
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 282 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 334
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 239 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 281
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 282 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 334
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 239 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 281
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 282 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 334
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 53.1 bits (126), Expect = 4e-07
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 18 GGASERERGGRPYSGVLDSPHARPEVGIPDGPPLKDNLGLRHRRTGARQNGGKVRHKRQA 77
G AS+ LD+ A P G D P KD K R K++
Sbjct: 226 GHASQSGDNSSEQGDGLDNSVASPGTGDDDDPD-KD----------------KKRQKKRG 268
Query: 78 L--QDMARPLKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
+ + ++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 269 IFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 321
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 53.1 bits (126), Expect = 4e-07
Identities = 20/44 (45%), Positives = 34/44 (77%)
Query: 85 LKQWLYKHRDNPYPTKTEKILLALGSQMTLVQVSNWFANARRRL 128
++ WL++H +PYP++ +K LA + +T++QV+NWF NARRR+
Sbjct: 260 MRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI 303
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,461,153
Number of Sequences: 37866
Number of extensions: 682233
Number of successful extensions: 1726
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1656
Number of HSP's gapped (non-prelim): 99
length of query: 352
length of database: 18,247,518
effective HSP length: 103
effective length of query: 249
effective length of database: 14,347,320
effective search space: 3572482680
effective search space used: 3572482680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.