Guide to the Human Genome
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Name: MEIS2 Sequence: fasta or formatted (477aa) NCBI GI: 24762241
Description:

Meis homeobox 2 isoform c

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [381aa] Meis homeobox 2 isoform f
alt prot [401aa] Meis homeobox 2 isoform a
alt prot [394aa] Meis homeobox 2 isoform b
alt prot [470aa] Meis homeobox 2 isoform d
alt prot [388aa] Meis homeobox 2 isoform g
alt prot [306aa] Meis homeobox 2 isoform h
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         34           2
 C cysteine            1.3          6           1
 D aspartate           7.3         35           4
 E glutamate           3.6         17           2
 F phenylalanine       2.5         12           1
 G glycine             9.0         43           2
 H histidine           6.3         30           2
 I isoleucine          3.4         16           1
 K lysine              3.6         17           2
 L leucine             7.1         34           2
 M methionine          5.0         24           3
 N asparagine          3.8         18           2
 P proline            10.3         49           2
 Q glutamine           5.7         27           2
 R arginine            3.8         18           3
 S serine              8.8         42           2
 T threonine           3.8         18           1
 V valine              4.8         23           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Meis homeobox 2 isoform c 
MEIS2                 0.979   Meis homeobox 2 isoform d 
MEIS2                 0.793   Meis homeobox 2 isoform a 
MEIS2                 0.771   Meis homeobox 2 isoform b 
MEIS2                 0.763   Meis homeobox 2 isoform g 
MEIS2                 0.742   Meis homeobox 2 isoform f 
MEIS1                 0.649   Meis homeobox 1 
MEIS2                 0.573   Meis homeobox 2 isoform h 
MEIS3                 0.463   Meis1, myeloid ecotropic viral integration site 1 ho...
MEIS3                 0.436   Meis1, myeloid ecotropic viral integration site 1 ho...
PKNOX2                0.208   PBX/knotted 1 homeobox 2 
PKNOX1                0.193   PBX/knotted 1 homeobox 1 
TGIF2LX               0.054   TGFB-induced factor homeobox 2-like, X-linked 
TGIF2LY               0.053   TGFB-induced factor homeobox 2-like, Y-linked 
TGIF1                 0.050   TG-interacting factor isoform b 
TGIF1                 0.050   TG-interacting factor isoform c 
TGIF1                 0.050   TG-interacting factor isoform c 
TGIF1                 0.050   TG-interacting factor isoform a 
TGIF2                 0.049   TGFB-induced factor homeobox 2 
TGIF1                 0.048   TG-interacting factor isoform d 
TGIF1                 0.048   TG-interacting factor isoform d 
TGIF1                 0.048   TG-interacting factor isoform d 
TGIF1                 0.048   TG-interacting factor isoform d 
PBX2                  0.042   pre-B-cell leukemia homeobox 2 
PBX4                  0.040   pre-B-cell leukemia homeobox 4 
PBX1                  0.039   pre-B-cell leukemia homeobox 1 
PBX3                  0.037   pre-B-cell leukemia homeobox 3 isoform 2 
PBX3                  0.037   pre-B-cell leukemia homeobox 3 isoform 1 
IRX3                  0.030   iroquois homeobox 3 
IRX1                  0.029   iroquois homeobox protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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