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Name: MEIS2 Sequence: fasta or formatted (470aa) NCBI GI: 24762250
Description:

Meis homeobox 2 isoform d

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [381aa] Meis homeobox 2 isoform f
alt prot [477aa] Meis homeobox 2 isoform c
alt prot [401aa] Meis homeobox 2 isoform a
alt prot [394aa] Meis homeobox 2 isoform b
alt prot [388aa] Meis homeobox 2 isoform g
alt prot [306aa] Meis homeobox 2 isoform h
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         34           2
 C cysteine            1.3          6           1
 D aspartate           7.2         34           4
 E glutamate           3.6         17           2
 F phenylalanine       2.3         11           1
 G glycine             8.9         42           2
 H histidine           6.4         30           2
 I isoleucine          3.4         16           1
 K lysine              3.6         17           2
 L leucine             6.8         32           2
 M methionine          5.1         24           3
 N asparagine          3.8         18           2
 P proline            10.2         48           2
 Q glutamine           5.7         27           2
 R arginine            3.8         18           3
 S serine              8.7         41           2
 T threonine           3.8         18           1
 V valine              4.9         23           1
 W tryptophan          0.6          3           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Meis homeobox 2 isoform d 
MEIS2                 0.993   Meis homeobox 2 isoform c 
MEIS2                 0.790   Meis homeobox 2 isoform b 
MEIS2                 0.782   Meis homeobox 2 isoform a 
MEIS2                 0.760   Meis homeobox 2 isoform f 
MEIS2                 0.752   Meis homeobox 2 isoform g 
MEIS1                 0.665   Meis homeobox 1 
MEIS2                 0.589   Meis homeobox 2 isoform h 
MEIS3                 0.469   Meis1, myeloid ecotropic viral integration site 1 ho...
MEIS3                 0.442   Meis1, myeloid ecotropic viral integration site 1 ho...
PKNOX2                0.211   PBX/knotted 1 homeobox 2 
PKNOX1                0.197   PBX/knotted 1 homeobox 1 
TGIF2LX               0.055   TGFB-induced factor homeobox 2-like, X-linked 
TGIF2LY               0.054   TGFB-induced factor homeobox 2-like, Y-linked 
TGIF1                 0.052   TG-interacting factor isoform b 
TGIF1                 0.052   TG-interacting factor isoform c 
TGIF1                 0.052   TG-interacting factor isoform c 
TGIF1                 0.051   TG-interacting factor isoform a 
TGIF1                 0.050   TG-interacting factor isoform d 
TGIF1                 0.050   TG-interacting factor isoform d 
TGIF1                 0.050   TG-interacting factor isoform d 
TGIF1                 0.050   TG-interacting factor isoform d 
TGIF2                 0.050   TGFB-induced factor homeobox 2 
PBX4                  0.040   pre-B-cell leukemia homeobox 4 
PBX1                  0.039   pre-B-cell leukemia homeobox 1 
PBX2                  0.039   pre-B-cell leukemia homeobox 2 
PBX3                  0.037   pre-B-cell leukemia homeobox 3 isoform 2 
PBX3                  0.037   pre-B-cell leukemia homeobox 3 isoform 1 
IRX3                  0.030   iroquois homeobox 3 
IRX1                  0.029   iroquois homeobox protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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