SORT1 9529

Name: SORT1	Sequence: fasta or formatted (831aa)		NCBI GI: 17149834
Description: sortilin 1 preproprotein		Referenced in: Additional Brain Proteins Epidermal Growth Factor Peptide and Protein G-coupled Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 44 4 C cysteine 2.0 17 1 D aspartate 7.1 59 2 E glutamate 5.2 43 2 F phenylalanine 4.5 37 2 G glycine 9.1 76 2 H histidine 2.6 22 1 I isoleucine 5.3 44 2 K lysine 4.8 40 3 L leucine 8.7 72 5 M methionine 1.8 15 2 N asparagine 3.9 32 2 P proline 4.5 37 4 Q glutamine 3.0 25 2 R arginine 4.7 39 2 S serine 8.8 73 2 T threonine 6.6 55 3 V valine 6.6 55 2 W tryptophan 2.0 17 1 Y tyrosine 3.5 29 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sortilin 1 preproprotein SORL1 0.133 sortilin-related receptor containing LDLR class A rep... SORCS2 0.126 VPS10 domain receptor protein SORCS 2 SORCS1 0.119 SORCS receptor 1 isoform b SORCS1 0.119 SORCS receptor 1 isoform a SORCS3 0.112 VPS10 domain receptor protein SORCS 3 FBXL16 0.005 F-box and leucine-rich repeat protein 16 ZNF580 0.005 zinc finger protein 580 ZNF580 0.005 zinc finger protein 580 BAG4 0.005 BCL2-associated athanogene 4 LOC645249 0.005 PREDICTED: hypothetical protein LOC645249 0.005 PREDICTED: hypothetical protein LOC645249 0.005 PREDICTED: hypothetical protein LOC645249 0.005 PREDICTED: hypothetical protein EIF3B 0.004 eukaryotic translation initiation factor 3, subunit ... EIF3B 0.004 eukaryotic translation initiation factor 3, subunit ... C2orf53 0.004 hypothetical protein LOC339779 WRNIP1 0.004 Werner helicase interacting protein isoform 2 WRNIP1 0.004 Werner helicase interacting protein isoform 1 CDH22 0.004 cadherin 22 precursor LOC729159 0.004 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... KCNC2 0.004 Shaw-related voltage-gated potassium channel protein... KCNC2 0.004 Shaw-related voltage-gated potassium channel protein... KCNC2 0.004 Shaw-related voltage-gated potassium channel protein... LOC729159 0.004 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... MAP1A 0.004 microtubule-associated protein 1A NFE2L3 0.004 nuclear factor erythroid 2-like 3 PEG3 0.003 paternally expressed 3 isoform 3 PEG3 0.003 paternally expressed 3 isoform 1 PEG3 0.003 paternally expressed 3 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.