Guide to the Human Genome
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Name: KCNC2 Sequence: fasta or formatted (613aa) NCBI GI: 21217561
Description:

Shaw-related voltage-gated potassium channel protein 2 isoform KV3.2a

Referenced in:

Potassium Channels

Other entries for this name:
alt prot [638aa] Shaw-related voltage-gated potassium channel protein 2 isoform KV...
alt prot [558aa] Shaw-related voltage-gated potassium channel protein 2 isoform KV...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         44           2
 C cysteine            2.6         16           2
 D aspartate           4.9         30           2
 E glutamate           5.9         36           3
 F phenylalanine       5.5         34           3
 G glycine             8.8         54           3
 H histidine           1.8         11           1
 I isoleucine          5.1         31           2
 K lysine              3.9         24           2
 L leucine            10.4         64           3
 M methionine          1.8         11           1
 N asparagine          3.6         22           2
 P proline             7.2         44           3
 Q glutamine           1.8         11           1
 R arginine            6.5         40           2
 S serine              6.0         37           2
 T threonine           6.9         42           2
 V valine              6.0         37           2
 W tryptophan          1.3          8           2
 Y tyrosine            2.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Shaw-related voltage-gated potassium channel protein... 
KCNC2                 0.968   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.878   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.630   Shaw-related voltage-gated potassium channel protein...
KCNC1                 0.618   Shaw-related voltage-gated potassium channel protei...
KCNC4                 0.618   Shaw-related voltage-gated potassium channel protein...
KCNC1                 0.582   Shaw-related voltage-gated potassium channel protein ...
KCNC4                 0.579   Shaw-related voltage-gated potassium channel protein...
KCNC3                 0.538   Shaw-related voltage-gated potassium channel protein...
KCNB1                 0.217   potassium voltage-gated channel, Shab-related subfami...
KCNB2                 0.215   potassium voltage-gated channel, Shab-related subfam...
KCNA1                 0.189   potassium voltage-gated channel subfamily A member ...
KCNA10                0.188   potassium voltage-gated channel, shaker-related subfa...
KCND1                 0.183   potassium voltage-gated channel, Shal-related subfam...
KCNA7                 0.183   potassium voltage-gated channel, shaker-related subf...
KCNF1                 0.183   potassium voltage-gated channel, subfamily F, member...
KCND3                 0.180   potassium voltage-gated channel, Shal-related subfam...
KCNA4                 0.180   potassium voltage-gated channel, shaker-related subfa...
KCNA2                 0.179   potassium voltage-gated channel, shaker-related subfa...
KCNS3                 0.179   potassium voltage-gated channel delayed-rectifier pr...
KCNA3                 0.178   potassium voltage-gated channel, shaker-related subf...
KCND3                 0.178   potassium voltage-gated channel, Shal-related subfam...
KCNA6                 0.176   potassium voltage-gated channel, shaker-related subfa...
KCND2                 0.175   potassium voltage-gated channel, Shal-related subfami...
KCNA5                 0.173   potassium voltage-gated channel, shaker-related subf...
KCNV1                 0.165   potassium channel, subfamily V, member 1 
KCNS2                 0.165   potassium voltage-gated channel, delayed-rectifier, ...
KCNS1                 0.160   potassium voltage-gated channel delayed-rectifier pr...
KCNG1                 0.156   potassium voltage-gated channel, subfamily G, member...
KCNG2                 0.149   potassium voltage-gated channel, subfamily G, member ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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