Guide to the Human Genome
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Name: FBXL16 Sequence: fasta or formatted (479aa) NCBI GI: 24025682
Description:

F-box and leucine-rich repeat protein 16

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         42           2
 C cysteine            4.2         20           2
 D aspartate           4.2         20           2
 E glutamate           5.2         25           2
 F phenylalanine       2.7         13           1
 G glycine             7.5         36           2
 H histidine           2.1         10           1
 I isoleucine          2.9         14           1
 K lysine              3.8         18           2
 L leucine            15.9         76           2
 M methionine          1.3          6           1
 N asparagine          3.1         15           1
 P proline             7.5         36           5
 Q glutamine           3.1         15           1
 R arginine            4.6         22           2
 S serine              7.7         37           2
 T threonine           5.8         28           3
 V valine              6.1         29           2
 W tryptophan          1.5          7           1
 Y tyrosine            2.1         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and leucine-rich repeat protein 16 
FBXL20                0.103   F-box and leucine-rich repeat protein 20 
FBXL14                0.101   F-box and leucine-rich repeat protein 14 
FBXL7                 0.086   F-box and leucine-rich repeat protein 7 
FBXL2                 0.079   F-box and leucine-rich repeat protein 2 
FBXL13                0.065   F-box and leucine-rich repeat protein 13 isoform 1 ...
FBXL13                0.049   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL15                0.038   F-box and leucine-rich repeat protein 15 
KDM2B                 0.037   F-box and leucine-rich repeat protein 10 isoform a [...
KDM2B                 0.037   F-box and leucine-rich repeat protein 10 isoform b [...
FBXL17                0.036   F-box and leucine-rich repeat protein 17 
AMN1                  0.034   antagonist of mitotic exit network 1 homolog 
FBXL19                0.030   F-box and leucine-rich repeat protein 19 
LRRC29                0.030   F-box and leucine-rich repeat protein 9 
LRRC29                0.030   F-box and leucine-rich repeat protein 9 
FBXL4                 0.028   F-box and leucine-rich repeat protein 4 
KDM2A                 0.028   F-box and leucine-rich repeat protein 11 
ATP5SL                0.027   ATP5S-like 
LRRC33                0.023   leucine rich repeat containing 33 
FBXL6                 0.023   F-box and leucine-rich repeat protein 6 isoform 2 [H...
SKP2                  0.022   S-phase kinase-associated protein 2 isoform 2 
FBXL6                 0.022   F-box and leucine-rich repeat protein 6 isoform 1 [H...
SKP2                  0.021   S-phase kinase-associated protein 2 isoform 1 
YLPM1                 0.021   YLP motif containing 1 
NACA                  0.020   nascent polypeptide-associated complex alpha subuni...
COL9A3                0.020   alpha 3 type IX collagen 
DIAPH1                0.020   diaphanous 1 isoform 2 
DIAPH1                0.020   diaphanous 1 isoform 1 
WAS                   0.020   Wiskott-Aldrich syndrome protein 
FBXL12                0.020   F-box and leucine-rich repeat protein 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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