Guide to the Human Genome
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Name: PEG3 Sequence: fasta or formatted (1588aa) NCBI GI: 226053169
Description:

paternally expressed 3 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [1588aa] paternally expressed 3 isoform 1
alt prot [1462aa] paternally expressed 3 isoform 2
alt prot [1464aa] paternally expressed 3 isoform 3
alt mRNA [1588aa] paternally expressed 3 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         92           9
 C cysteine            2.5         39           1
 D aspartate           6.0         95           3
 E glutamate          12.4        197           5
 F phenylalanine       4.0         63           2
 G glycine             5.8         92           2
 H histidine           4.1         65           1
 I isoleucine          4.1         65           2
 K lysine              6.6        105           3
 L leucine             5.4         86           2
 M methionine          1.7         27           1
 N asparagine          3.7         59           2
 P proline             5.1         81           2
 Q glutamine           4.4         70           2
 R arginine            6.6        105           2
 S serine              9.6        152           3
 T threonine           4.4         70           1
 V valine              4.4         70           2
 W tryptophan          0.4          7           1
 Y tyrosine            3.0         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   paternally expressed 3 isoform 1 
PEG3                  1.000   paternally expressed 3 isoform 1 
PEG3                  1.000   paternally expressed 3 isoform 1 
PEG3                  0.920   paternally expressed 3 isoform 2 
PEG3                  0.917   paternally expressed 3 isoform 3 
ZNF91                 0.094   zinc finger protein 91 
ZIM2                  0.082   zinc finger, imprinted 2 
ZIM2                  0.082   zinc finger, imprinted 2 
ZIM2                  0.082   zinc finger, imprinted 2 
ZNF721                0.081   zinc finger protein 721 
ZNF208                0.081   zinc finger protein 208 
LOC100292052          0.079   PREDICTED: similar to hCG1773661 
LOC100287226          0.079   PREDICTED: similar to hCG1773661 
LOC100287226          0.079   PREDICTED: hypothetical protein XP_002343677 
ZNF287                0.076   zinc finger protein 287 
ZNF99                 0.070   zinc finger protein 99 
ZNF135                0.069   zinc finger protein 135 
ZNF420                0.068   zinc finger protein 420 
ZNF658                0.068   zinc finger protein 658 
ZNF167                0.068   zinc finger protein 167 isoform 1 
ZFP62                 0.065   zinc finger protein 62 homolog 
ZNF184                0.064   zinc finger protein 184 
ZNF594                0.064   zinc finger protein 594 
ZNF629                0.063   zinc finger protein 629 
ZNF624                0.062   zinc finger protein 624 
ZNF780B               0.061   zinc finger protein 780B 
ZNF836                0.060   zinc finger protein 836 
ZNF107                0.059   zinc finger protein 107 
ZNF107                0.059   zinc finger protein 107 
ZKSCAN5               0.058   zinc finger with KRAB and SCAN domains 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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