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Search of human proteins with 171460956
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|171460956 ubiquitin specific peptidase like 1 [Homo sapiens]
(1092 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|171460956 ubiquitin specific peptidase like 1 [Homo sapiens] 2207 0.0
gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens] 42 0.002
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 41 0.005
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 39 0.021
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 39 0.027
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 38 0.060
gi|4507305 sulfotransferase family, cytosolic, 1C, member 1 isof... 38 0.060
gi|54112401 calmodulin-binding transcription activator 1 [Homo s... 37 0.078
gi|28372497 ubiquitin protein ligase E3 component n-recognin 1 [... 37 0.10
gi|118918413 MICAL C-terminal like [Homo sapiens] 37 0.10
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 37 0.13
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 37 0.13
gi|167736355 mucin 4 isoform a [Homo sapiens] 36 0.17
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 36 0.23
gi|4506467 radixin [Homo sapiens] 35 0.39
gi|122937341 hypothetical protein LOC388960 [Homo sapiens] 35 0.39
gi|239757331 PREDICTED: hypothetical protein [Homo sapiens] 34 0.66
gi|239751841 PREDICTED: hypothetical protein [Homo sapiens] 34 0.66
gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo ... 34 0.66
gi|38261962 activating transcription factor 7 interacting protei... 34 0.66
gi|6005964 ring finger protein 110 [Homo sapiens] 34 0.86
gi|45827771 autoantigen RCD8 [Homo sapiens] 34 0.86
gi|83367077 mucin 16 [Homo sapiens] 33 1.1
gi|71061468 centromere protein E [Homo sapiens] 33 1.1
gi|5031579 A-kinase anchor protein 8 [Homo sapiens] 33 1.1
gi|154813191 IQ motif containing E isoform 1 [Homo sapiens] 33 1.1
gi|154813193 IQ motif containing E isoform 2 [Homo sapiens] 33 1.1
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 33 1.5
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 33 1.9
gi|21450838 SH3 and cysteine rich domain 3 [Homo sapiens] 33 1.9
>gi|171460956 ubiquitin specific peptidase like 1 [Homo sapiens]
Length = 1092
Score = 2207 bits (5719), Expect = 0.0
Identities = 1092/1092 (100%), Positives = 1092/1092 (100%)
Query: 1 MMDSPKIGNGLPVIGPGTDIGISSLHMVGYLGKNFDSAKVPSDEYCPACREKGKLKALKT 60
MMDSPKIGNGLPVIGPGTDIGISSLHMVGYLGKNFDSAKVPSDEYCPACREKGKLKALKT
Sbjct: 1 MMDSPKIGNGLPVIGPGTDIGISSLHMVGYLGKNFDSAKVPSDEYCPACREKGKLKALKT 60
Query: 61 YRISFQESIFLCEDLQCIYPLGSKSLNNLISPDLEECHTPHKPQKRKSLESSYKDSLLLA 120
YRISFQESIFLCEDLQCIYPLGSKSLNNLISPDLEECHTPHKPQKRKSLESSYKDSLLLA
Sbjct: 61 YRISFQESIFLCEDLQCIYPLGSKSLNNLISPDLEECHTPHKPQKRKSLESSYKDSLLLA 120
Query: 121 NSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQNPIRTADSLERNEILEADTV 180
NSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQNPIRTADSLERNEILEADTV
Sbjct: 121 NSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQNPIRTADSLERNEILEADTV 180
Query: 181 DMATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLESKCTSFPQALCVQWKNAYALCWLDC 240
DMATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLESKCTSFPQALCVQWKNAYALCWLDC
Sbjct: 181 DMATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLESKCTSFPQALCVQWKNAYALCWLDC 240
Query: 241 ILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTSQLSGVKDGDCKKLTSEI 300
ILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTSQLSGVKDGDCKKLTSEI
Sbjct: 241 ILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTSQLSGVKDGDCKKLTSEI 300
Query: 301 FAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLETHIEKLFLYSFSWDFE 360
FAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLETHIEKLFLYSFSWDFE
Sbjct: 301 FAEIETCLNEVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLETHIEKLFLYSFSWDFE 360
Query: 361 CSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFML 420
CSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFML
Sbjct: 361 CSQCGHQYQNRHMKSLVTFTNVIPEWHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFML 420
Query: 421 HFVEGLPQNDLQHYAFHFEGCLYQITSVIQYRANNHFITWILDADGSWLECDDLKGPCSE 480
HFVEGLPQNDLQHYAFHFEGCLYQITSVIQYRANNHFITWILDADGSWLECDDLKGPCSE
Sbjct: 421 HFVEGLPQNDLQHYAFHFEGCLYQITSVIQYRANNHFITWILDADGSWLECDDLKGPCSE 480
Query: 481 RHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEKPVSLTSCSVGDAA 540
RHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEKPVSLTSCSVGDAA
Sbjct: 481 RHKKFEVPASEIHIVIWERKISQVTDKEAACLPLKKTNDQHALSNEKPVSLTSCSVGDAA 540
Query: 541 SAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGPKGLVDNILPLTLEETIQKTASVSQ 600
SAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGPKGLVDNILPLTLEETIQKTASVSQ
Sbjct: 541 SAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGPKGLVDNILPLTLEETIQKTASVSQ 600
Query: 601 LNSEAFLLENKPVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDISFPSQVVN 660
LNSEAFLLENKPVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDISFPSQVVN
Sbjct: 601 LNSEAFLLENKPVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDISFPSQVVN 660
Query: 661 TNMQSVQLNTEDTVNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTS 720
TNMQSVQLNTEDTVNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTS
Sbjct: 661 TNMQSVQLNTEDTVNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTS 720
Query: 721 QVSNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNR 780
QVSNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNR
Sbjct: 721 QVSNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNR 780
Query: 781 NTITDLQPSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAA 840
NTITDLQPSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAA
Sbjct: 781 NTITDLQPSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAA 840
Query: 841 HPHAHAASEVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEK 900
HPHAHAASEVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEK
Sbjct: 841 HPHAHAASEVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEK 900
Query: 901 KKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNELPYPIDIASESACTTVPGV 960
KKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNELPYPIDIASESACTTVPGV
Sbjct: 901 KKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNELPYPIDIASESACTTVPGV 960
Query: 961 SLYSSQTHEEILAELLSPTPVSTELSENGEGDFRYLGMGDSHIPPPVPSEFNDVSQNTHL 1020
SLYSSQTHEEILAELLSPTPVSTELSENGEGDFRYLGMGDSHIPPPVPSEFNDVSQNTHL
Sbjct: 961 SLYSSQTHEEILAELLSPTPVSTELSENGEGDFRYLGMGDSHIPPPVPSEFNDVSQNTHL 1020
Query: 1021 RQDHNYCSPTKKNPCEVQPDSLTNNACVRTLNLESPMKTDIFDEFFSSSALNALANDTLD 1080
RQDHNYCSPTKKNPCEVQPDSLTNNACVRTLNLESPMKTDIFDEFFSSSALNALANDTLD
Sbjct: 1021 RQDHNYCSPTKKNPCEVQPDSLTNNACVRTLNLESPMKTDIFDEFFSSSALNALANDTLD 1080
Query: 1081 LPHFDEYLFENY 1092
LPHFDEYLFENY
Sbjct: 1081 LPHFDEYLFENY 1092
>gi|19920317 cytoskeleton-associated protein 4 [Homo sapiens]
Length = 602
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Query: 788 PSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAA 847
PS K + GG ++K +H S A A KPPP + P PP+ + HP H
Sbjct: 2 PSAKQRGSKGGHGAASPSEKGAHPSGGADDVAKKPPPAPQQPPPPPAPH-PQQHPQQHPQ 60
Query: 848 SEVLEKSGSTSCGAQLNHSSYGNGISSA 875
++ K G G SS + S+A
Sbjct: 61 NQAHGKGGHRGGGGGGGKSSSSSSASAA 88
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 41.2 bits (95), Expect = 0.005
Identities = 51/251 (20%), Positives = 99/251 (39%), Gaps = 25/251 (9%)
Query: 801 TKGINQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAASEV---------- 850
T+ + +A+ S A + +PPP PP P S+ EV
Sbjct: 586 TRSMTNEAAAASAAAAAATEEPPPPLPPPPEPISTEPVETSRWTEEEMEVAKKGLVEHGR 645
Query: 851 ----LEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEK-KKLAA 905
+ K T AQ + Y N N ++L++ K K R++ + + +A+
Sbjct: 646 NWAAIAKMVGTKSEAQCK-NFYFNYKRRHNLDNLLQQHKQKTSRKPREERDVSQCESVAS 704
Query: 906 LMSSPQSRTVRSENLEQVPQDGSPNDCESIEDL--------LNELPYPIDIASESACTTV 957
+S+ + + + N E+ P+D + ED E ++ +E+A +T
Sbjct: 705 TVSAQEDEDIEASNEEENPEDSEVEAVKPSEDSPENATSRGNTEPAVELEPTTETAPSTS 764
Query: 958 PGVSLYSSQTHEEILAELLSPTPVSTELSENGEGDFRYLGMGDSHIPPPVPSEFNDVSQN 1017
P +++ S++ E+ E +S E +E + D + + + P P+ D S +
Sbjct: 765 PSLAVPSTKPAEDESVETQVNDSISAETAEQMDVDQQEHSAEEGSVCDPPPATKAD-SVD 823
Query: 1018 THLRQDHNYCS 1028
+R N+ S
Sbjct: 824 VEVRVPENHAS 834
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 39.3 bits (90), Expect = 0.021
Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 736 TTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFM-PLCVSAHNRNTITDLQPSVKGVN 794
TTTS + +LK N+K KGLI F P +R I D +
Sbjct: 414 TTTSTYISASTLKVNKK-------TKGLIDGLTKFFTPSPDGRRSRGEIIDFSKHYR--- 463
Query: 795 NFGGFKTKGINQK---ASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAASEVL 851
K ++QK SHV KPPP S PP P S ++ + A S
Sbjct: 464 -----PRKKVSQKQSCTSHVLATGTTQKLKPPPSSLPPPTPISGQSPSSQKSSTATSSPS 518
Query: 852 EKSGSTSC 859
+S S+ C
Sbjct: 519 PQSSSSQC 526
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 38.9 bits (89), Expect = 0.027
Identities = 47/201 (23%), Positives = 77/201 (38%), Gaps = 20/201 (9%)
Query: 498 ERKISQVTDKEAACLPLKKTNDQHALSNE--KPVSLTSCSVGDAASAETASVTHPKDISV 555
+ K S T + + K+T +S E +S++S G A T P S
Sbjct: 2139 QEKPSPATVRSTDPVTTKETKAVSEMSTEIGTMISVSSAEYGTNAKESVTDYTTPS--SS 2196
Query: 556 APRTLSQDTAVTHGDHLLSGPKGLVDNILPLTLEETIQKTASVSQLNSEAFLL------- 608
P T++ + + + P + N LPL ETIQ+++S++ + F L
Sbjct: 2197 LPNTVATNNTKMEDTLVNNVP---LPNTLPLPKRETIQQSSSLTSVPPTTFSLTFKMESA 2253
Query: 609 ----ENKPVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDISFPSQVVNTNMQ 664
EN P G T+T + ++SS S P + F S P V +
Sbjct: 2254 RKAWENSPNVREKGSPVTSTAPPIATGVSSSASGPSTAN--YNSFSSASMPQIPVASVTP 2311
Query: 665 SVQLNTEDTVNTKSVNNTDAT 685
+ L+ T T S++ T
Sbjct: 2312 TASLSGAGTYTTSSLSTKSTT 2332
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 37.7 bits (86), Expect = 0.060
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 701 QLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSW 759
++ QF+ K ++ +++ + S K KE +++T SKS+ +QS+ +K VG W
Sbjct: 218 KVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQSISSFMRKGTVGDW 276
>gi|4507305 sulfotransferase family, cytosolic, 1C, member 1 isoform
a [Homo sapiens]
Length = 296
Score = 37.7 bits (86), Expect = 0.060
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 701 QLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSW 759
++ QF+ K ++ +++ + S K KE +++T SKS+ +QS+ +K VG W
Sbjct: 207 KVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQSISSFMRKGTVGDW 265
>gi|54112401 calmodulin-binding transcription activator 1 [Homo
sapiens]
Length = 1673
Score = 37.4 bits (85), Expect = 0.078
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 7/141 (4%)
Query: 810 HVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAASEVLEKSG-----STSCGAQLN 864
H+ + + + P I P + PS+ A H+ A S G ST+ +
Sbjct: 1165 HLQRDEQAQLGQNPRIHCPASEEPSTESWMAQWHSEAISSPEIPKGVTVIASTNPELRRP 1224
Query: 865 HSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRSENLEQVP 924
S N SS +H+D + HKL + + + + A + P R + + VP
Sbjct: 1225 RSEPSNYYSSESHKDYPAPKKHKLNPEYFQTRQEKLLPTALSLEEPNIRKQSPSSKQSVP 1284
Query: 925 QDGSPNDCESIEDLLNELPYP 945
+ SP+ E + D EL P
Sbjct: 1285 ETLSPS--EGVRDFSRELSPP 1303
>gi|28372497 ubiquitin protein ligase E3 component n-recognin 1
[Homo sapiens]
Length = 1749
Score = 37.0 bits (84), Expect = 0.10
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 692 KSVEIEKDAQLKQFLTPKTEQLKP------ERVTSQVSNLKKKETTADSQT------TTS 739
K++ + +KQ+ T E L+ ER V N+ K+E T
Sbjct: 723 KTISTKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEPMP 782
Query: 740 KSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNRNTITDLQPSVKGVNNFGGF 799
S ++L EN+ + ++ +I++ A+F VS H + D S+K N +
Sbjct: 783 HSAIAKNLPENENNE---TGLENVINKVATFKKPGVSGHGVYELKD--ESLKDFNMYFYH 837
Query: 800 KTKGINQKASHVSKKARKSASKPPPISKPPAGPP 833
+K + KA H+ KK RK +K + PP PP
Sbjct: 838 YSKTQHSKAEHMQKKRRKQENKDEALPPPP--PP 869
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 37.0 bits (84), Expect = 0.10
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 40/195 (20%)
Query: 742 LQNQSLKEN----QKKPFVG-SWVKGLISRGASFMPLCVSAHNRNTITDLQPSVKGVNNF 796
L+ SL+EN K P S L + SF + R I DL F
Sbjct: 374 LEKVSLQENFPDASKPPKKRISLFSSLRLKDKSFESFLQESRQRKDIRDL---------F 424
Query: 797 GGFKTKGINQKASHVSKK--------ARKSASKPPPISKPPAGPPSSNGTAAHPHAHAAS 848
G K K + + ++ +K + + A+ PPP PP PP + G A + +
Sbjct: 425 GSPKRKVLPEDSAQALEKLLQPFKSTSLRQAAPPPPPPPPPPPPPPTAGGADSKNFPLRA 484
Query: 849 EVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMS 908
+V E S S S SS++ ++ + Q+ L+LK +K L+ KK +
Sbjct: 485 QVTEASSSAS------------STSSSSADEEFDPQL-SLQLKEKKTLRRRKK-----LE 526
Query: 909 SPQSRTVRSENLEQV 923
+ V+ E L+++
Sbjct: 527 KAMKQLVKQEELKRL 541
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 36.6 bits (83), Expect = 0.13
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 36/266 (13%)
Query: 524 SNEKPVSLTSCSVGDAASAETAS-VTHPKDISVAP-----RTLSQDTAVTHGDHLLSGPK 577
S EKP +C + S +S ++ K IS+ P RT T+ L + P
Sbjct: 247 SGEKPYECPNCKKRFSHSGSYSSHISSKKCISLIPVNGRPRT-GLKTSQCSSPSLSASPG 305
Query: 578 GLVDNILPLTLE-ETIQKTASVSQLNSEAFLLENKPVAENTGI-----LKTNTLLSQESL 631
+ +E + +Q+ SV+Q+ +E E KP+ +GI L+ L
Sbjct: 306 SPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFTGGGPL 365
Query: 632 MASS---------------VSAPCNEKLIQDQ-----FVDISFPSQVVNTNMQSVQLNTE 671
A+S + +P + L Q VD + QV+ N ++ +
Sbjct: 366 QATSSPQGMVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQANLASKEQ 425
Query: 672 DTVNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETT 731
+T+N + +I + +++D K + EQ P ++ NLKK+
Sbjct: 426 ETINASPIQQ-GGHSVISAISLPLVDQDGTTKIIINYSLEQ--PSQLQVVPQNLKKENPV 482
Query: 732 ADSQTTTSKSLQNQSLKENQKKPFVG 757
A + + K ++ ++K + K F G
Sbjct: 483 ATNSCKSEKLPEDLTVKSEKDKSFEG 508
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 36.6 bits (83), Expect = 0.13
Identities = 57/266 (21%), Positives = 104/266 (39%), Gaps = 36/266 (13%)
Query: 524 SNEKPVSLTSCSVGDAASAETAS-VTHPKDISVAP-----RTLSQDTAVTHGDHLLSGPK 577
S EKP +C + S +S ++ K IS+ P RT T+ L + P
Sbjct: 263 SGEKPYECPNCKKRFSHSGSYSSHISSKKCISLIPVNGRPRT-GLKTSQCSSPSLSASPG 321
Query: 578 GLVDNILPLTLE-ETIQKTASVSQLNSEAFLLENKPVAENTGI-----LKTNTLLSQESL 631
+ +E + +Q+ SV+Q+ +E E KP+ +GI L+ L
Sbjct: 322 SPTRPQIRQKIENKPLQEQLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFTGGGPL 381
Query: 632 MASS---------------VSAPCNEKLIQDQ-----FVDISFPSQVVNTNMQSVQLNTE 671
A+S + +P + L Q VD + QV+ N ++ +
Sbjct: 382 QATSSPQGMVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQANLASKEQ 441
Query: 672 DTVNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETT 731
+T+N + +I + +++D K + EQ P ++ NLKK+
Sbjct: 442 ETINASPIQQ-GGHSVISAISLPLVDQDGTTKIIINYSLEQ--PSQLQVVPQNLKKENPV 498
Query: 732 ADSQTTTSKSLQNQSLKENQKKPFVG 757
A + + K ++ ++K + K F G
Sbjct: 499 ATNSCKSEKLPEDLTVKSEKDKSFEG 524
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 36.2 bits (82), Expect = 0.17
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 591 TIQKTASVSQLNSEAFLLENKPVAENTGI--LKTNTLLSQESLMASSVSAPCNEKLIQDQ 648
T + S S N + E A+ + + T+TL S S+ +AP +E
Sbjct: 65 TSNQDISASSQNHQTKSTETTSKAQTDTLTQMMTSTLFSSPSVHNVMETAPPDE------ 118
Query: 649 FVDISFPSQVVNTNMQSVQLNTEDTVNTKSVNNTDATGLIQGVKS-------VEIEKDAQ 701
+ SFPS V NT M + + T T ++ NT+ T G +S V I +
Sbjct: 119 -MTTSFPSSVTNTLMMTSKTITMTTSTDSTLGNTEETS-TAGTESSTPVTSAVSITAGQE 176
Query: 702 LKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTT 738
+ T ++ +SQ + +TT +SQT+T
Sbjct: 177 GQSRTTSWRTSIQDTSASSQNHWTRSTQTTRESQTST 213
Score = 32.0 bits (71), Expect = 3.3
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 21/229 (9%)
Query: 529 VSLTSCSVGDAASAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGPKGLVDNILPLTL 588
VS + G+ A++ SVT+ ++ T++ T T G+ + + +++P+T
Sbjct: 235 VSQKTSPSGETATSSLCSVTNTSMMTSEKITVTTSTGSTLGNPGETSSVPVTGSLMPVTS 294
Query: 589 EETI------QKTASVSQLNSE---AFLLENKPVA-ENTGILKTNTLLSQESLMASSV-- 636
+ Q A+ S+ +++ AF ++ + E T + + NTL + + S+V
Sbjct: 295 AALVTFDPEGQSPATFSRTSTQDTTAFSKNHQTQSVETTRVSQINTLNTLTPVTTSTVLS 354
Query: 637 -------SAPCNEKLIQDQFVDISFPSQVVNTNMQSVQLNTEDTVNTKSVNNTDATGL-I 688
S +++ S PS V NT + + ++ T ++ NT+ T L +
Sbjct: 355 SPSGFNPSGTVSQETFPSGETTTSSPSSVSNTFLVTSKVFRMPTSRDSTLGNTEETSLSV 414
Query: 689 QGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTT 737
G S K + + T T L P + ++S + + ++TT
Sbjct: 415 SGTISAITSKVSTIWWSDTLST-ALSPSSLPPKISTAFHTQQSEGAETT 462
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo
sapiens]
Length = 1064
Score = 35.8 bits (81), Expect = 0.23
Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 512 LPLKKTNDQHALSNEKPVSLTSCSVGDAASAETASVTHPKDISVAPRTLSQDTAVTHGDH 571
L L + +DQ + S T + A S ET ++T DIS T S TA+T
Sbjct: 441 LILLEVHDQRIQAKNPRYSQTPFTSSTATSPETTTLTCTNDIS----TESLTTAMTSTTP 496
Query: 572 LLSGPKGLVDNILPLTLEETIQKTASVSQLNSEAFLLENKPVAENTGILKTNTLLSQESL 631
++S I P T ++ TAS G TNTL S S
Sbjct: 497 VISA-------ITPKTTVTSMTTTAS--------------------GPTTTNTLSSLTSS 529
Query: 632 MASSVSAPCNEKLIQDQFVDISFPSQVVNTNMQSVQLNTEDTVNTKSVNNT 682
+ SS AP N ++I + PS +V T ++ +T + T ++ T
Sbjct: 530 ILSSTPAP-NTEVITSHTTTTTPPSTLVTTLPTAIARSTPTSETTYPISPT 579
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 35.0 bits (79), Expect = 0.39
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 820 SKPPPISKPPAGPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSSYGNGISSANHED 879
S PPP PP PP+ N H +A E S S +NH S ++ +
Sbjct: 468 SAPPPPPPPPVIPPTENEHDEHDENNA-----EASAELSNEGVMNHRSEEERVTETQKNE 522
Query: 880 LVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRS--ENLEQVPQDGSPNDCESIE 936
V+ Q+ L +L + KK ++ + + R + L Q+ Q + + E
Sbjct: 523 RVKKQLQALSSELAQARDETKKTQNDVLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFE 581
>gi|122937341 hypothetical protein LOC388960 [Homo sapiens]
Length = 922
Score = 35.0 bits (79), Expect = 0.39
Identities = 67/341 (19%), Positives = 127/341 (37%), Gaps = 50/341 (14%)
Query: 600 QLNSEAFLLENKPV------AENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDIS 653
Q S+ F L P + NT L++N + + V +P N +
Sbjct: 297 QSPSQTFCLPQTPEFSKSFSSRNTQTLESNPSPELGDISITPVQSPTNLLTLSPA----- 351
Query: 654 FPSQVVNTNMQSVQLNTEDT----VNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPK 709
PSQ N N ++ T + V+ + N D L VEI L + P
Sbjct: 352 -PSQEKNENENLDEIKTNLSKPLDVHQILIGNQDPPLL-----PVEIPDIHPLLACIDPL 405
Query: 710 TEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGAS 769
++ +P S+ +NL+ K + + Q +++ S + + +WV+ +
Sbjct: 406 GQEEQPG---SENANLRNKSLSLEDQGIFENGIESSSDLAD-----ITTWVED------T 451
Query: 770 FMPLCVSAHNRNTITDLQ----PSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPI 825
++P S+ + DL PS K + K + +K+ + + +
Sbjct: 452 YLPPIFSS-----LQDLDQPESPSAKKAKDTSAIKVNQVQEKSCVIKGHSDQVRKNKHKA 506
Query: 826 SKPPAGPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQI 885
S+P G P + +P EV+ S + S A +N + + SS +I
Sbjct: 507 SEPIQGAPKAKIQPKNPECLLEREVVVGSATVSNSASVNKAKH----SSNKPHKAASSRI 562
Query: 886 HKLRLKLRKKLKAEKKKLA--ALMSSPQSRTVRSENLEQVP 924
K + ++K K +K + + S + V+ E + +P
Sbjct: 563 SKTKSHGQEKTKGNRKNSSKKSEESKQSGKKVKVEEKQTIP 603
>gi|239757331 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 34.3 bits (77), Expect = 0.66
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 816 RKSASKPPPISKPPAGP---------------PSSNGTAAHPHAHAASEVLEKSGSTSCG 860
R+S S+ P S P+GP P+S G+A P +S + +S
Sbjct: 61 RRSRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSR 120
Query: 861 AQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRSEN 919
+L +S + + + +LR +LR+ + E+++ +L S + R++RS +
Sbjct: 121 LRLLRRFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSL-SRSRLRSLRSRS 178
>gi|239751841 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 34.3 bits (77), Expect = 0.66
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 816 RKSASKPPPISKPPAGP---------------PSSNGTAAHPHAHAASEVLEKSGSTSCG 860
R+S S+ P S P+GP P+S G+A P +S + +S
Sbjct: 61 RRSRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSR 120
Query: 861 AQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRSEN 919
+L +S + + + +LR +LR+ + E+++ +L S + R++RS +
Sbjct: 121 LRLLRRFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSL-SRSRLRSLRSRS 178
>gi|239746332 PREDICTED: hypothetical protein XP_002343733 [Homo
sapiens]
Length = 231
Score = 34.3 bits (77), Expect = 0.66
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 16/119 (13%)
Query: 816 RKSASKPPPISKPPAGP---------------PSSNGTAAHPHAHAASEVLEKSGSTSCG 860
R+S S+ P S P+GP P+S G+A P +S + +S
Sbjct: 61 RRSRSRSRPFSSGPSGPSGPSSPGGPSSGGASPASEGSAMSPPPPRSSSLRSRSRRARSR 120
Query: 861 AQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAALMSSPQSRTVRSEN 919
+L +S + + + +LR +LR+ + E+++ +L S + R++RS +
Sbjct: 121 LRLLRRFRSRSLSLLRSLERLRSSLSRLRERLRRSRERERRRSRSL-SRSRLRSLRSRS 178
>gi|38261962 activating transcription factor 7 interacting protein
[Homo sapiens]
Length = 1270
Score = 34.3 bits (77), Expect = 0.66
Identities = 46/238 (19%), Positives = 102/238 (42%), Gaps = 31/238 (13%)
Query: 537 GDAASAETASVTHPKDISVAPRTLSQDTAVTHGDHLLSGPKGL--------VDNILPLTL 588
GD +S+E AS D++ + T+ + D PK + +DNI P +
Sbjct: 257 GDLSSSELAS----DDLATGELASDELTSESTFDRTFE-PKSVPVCEPVPEIDNIEPSSN 311
Query: 589 EET--IQKTASVSQLNS--EAFLLENKPVAENTGILKTNTLLSQESLMASSVSAPCNEKL 644
++ ++K + +L L+ K A+N TL + ++ + S P NEK
Sbjct: 312 KDDDFLEKNGADEKLEQIQSKDSLDEKNKADNNIDANEETLETDDTTICSD-RPPENEKK 370
Query: 645 IQDQFV-DISFPSQVVNTNMQSVQ---------LNTEDTVNTKSVNNTDATGLIQGVKSV 694
+++ + +++ ++++M+ Q + +T+N + + + +++ S+
Sbjct: 371 VEEDIITELALGEDAISSSMEIDQGEKNEDETSADLVETINENVIEDNKSENILENTDSM 430
Query: 695 EIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQSLKENQK 752
E ++ + + L P ++L S+ S L ET D + S + S +E+ +
Sbjct: 431 ETDEIIPILEKLAPSEDEL---TCFSKTSLLPIDETNPDLEEKMESSFGSPSKQESSE 485
Score = 32.7 bits (73), Expect = 1.9
Identities = 72/378 (19%), Positives = 148/378 (39%), Gaps = 43/378 (11%)
Query: 629 ESLMASSVSAPC----NEKLIQDQFVDISFPSQVVNTNMQSVQLNTEDTVNTKSVNNTDA 684
E M SS +P +E L ++ F+ +S + +S ++ +T + V + +
Sbjct: 468 EEKMESSFGSPSKQESSESLPKEAFLVLSDEEDISGEKDESEVISQNETCSPAEVESNEK 527
Query: 685 TGLIQGVKSV---EIEKDAQLKQFLTPKTEQLKP-ERVTSQVSNLKKKETTADSQTT-TS 739
+ + V + E+ ++ +F K + + + V S+ ++E A+ Q T+
Sbjct: 528 DNKPEEEEQVIHEDDERPSEKNEFSRRKRSKSEDMDNVQSKRRRYMEEEYEAEFQVKITA 587
Query: 740 KSLQNQSLKENQKKPFVGSWV--------------KGLISRGASFMPLCVSAHNRNTITD 785
K NQ L++ V W+ K L + + ++ +T+
Sbjct: 588 KGDINQKLQK------VIQWLLEEKLCALQCAVFDKTLAELKTRVEKIECNKRHKTVLTE 641
Query: 786 LQPSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAH 845
LQ + + TK + A KK + PP +SN ++ +A
Sbjct: 642 LQAKIARL-------TKRF-EAAKEDLKKRHEHPPNPPVSPGKTVNDVNSNNNMSYRNAG 693
Query: 846 AASEVLEKSGSTSCGAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLAA 905
++LE + S A + + N +SS N + + + KL+ + + +
Sbjct: 694 TVRQMLESKRNVSESAPPSFQTPVNTVSSTNL--VTPPAVVSSQPKLQTPVTSGSLTATS 751
Query: 906 LMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNELPYPIDIASE-SACTTVPGVSLYS 964
++ +P + TV + QVP G+P S++ L L P+ ++S+ + PG + +
Sbjct: 752 VLPAPNTATVVATT--QVP-SGNPQPTISLQPLPVILHVPVAVSSQPQLLQSHPGTLVTN 808
Query: 965 SQTHEEILAELLSPTPVS 982
+ + SP VS
Sbjct: 809 QPSGNVEFISVQSPPTVS 826
>gi|6005964 ring finger protein 110 [Homo sapiens]
Length = 344
Score = 33.9 bits (76), Expect = 0.86
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 777 AHNRNTITDLQPSVKGVNNFGGFKTKGINQKASHVSKKARKSASKPPPISKPPAGPPSSN 836
A R T+ + +G N G + + ++ KA + S+S P P + P G PSS+
Sbjct: 232 ACKRLTLATVPTPSEGTNTSGASECESVSDKAPSPATLPATSSSLPSPAT-PSHGSPSSH 290
Query: 837 G-TAAHPHAHAASEVLEKSGSTSCGAQLN 864
G A HP + + + + G LN
Sbjct: 291 GPPATHPTSPTPPSTASGATTAANGGSLN 319
>gi|45827771 autoantigen RCD8 [Homo sapiens]
Length = 1401
Score = 33.9 bits (76), Expect = 0.86
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 3/134 (2%)
Query: 513 PLKKTNDQHALSNEKPVSLTSCSVGDAASAETASVTH-PKDISVAPR-TLSQDTAVTHGD 570
P ++ + S+ SLT+ S + SA S+T P++++++P+ L ++
Sbjct: 612 PSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQLDGSLTMSSSG 671
Query: 571 HLLSGPKGLVDNILPLTLEETIQKTASVSQLNSEAFLLENKPVAENTGILKTNTLLSQES 630
L + P+GL+ +LP ++ K + A LE + V E G+ + + ++
Sbjct: 672 SLQASPRGLLPGLLPAPADKLTPKGPGQVPTATSALSLELQEV-EPLGLPQASPSRTRSP 730
Query: 631 LMASSVSAPCNEKL 644
+ SS S ++ +
Sbjct: 731 DVISSASTALSQDI 744
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 33.5 bits (75), Expect = 1.1
Identities = 64/305 (20%), Positives = 116/305 (38%), Gaps = 34/305 (11%)
Query: 496 IWERKISQVTDKEAACLPLKKTNDQHALSNEKPVSLTSCSVGDAASAETASVTHPKDISV 555
+W+ S T + + + H+ + + T + AAS A +P+ +
Sbjct: 2052 LWDLTTSLPTTTWPSTSLSEALSSGHSGVSNPSSTTTEFPLFSAASTSAAKQRNPETETH 2111
Query: 556 APRTLSQDTAVTHGDH---LLSGPKGL-VDNILPLTLEETIQKTASVSQLNSEAFLLENK 611
P+ + T T L P G + + +PL + I + VS L SE+ +
Sbjct: 2112 GPQNTAASTLNTDASSVTGLSETPVGASISSEVPLPM--AITSRSDVSGLTSESTANPSL 2169
Query: 612 PVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDISFPSQVVNTNMQSVQLNTE 671
A + G T T +S P +E L+ F P V S+ L +
Sbjct: 2170 GTASSAGTKLTRT-----------ISLPTSESLVS--FRMNKDPWTV------SIPLGSH 2210
Query: 672 DTVNTKS---VNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKK 728
T NT++ VN+ GL V S I+ + + + + P+ + +S+ +K
Sbjct: 2211 PTTNTETSIPVNSAGPPGL-STVASDVIDTPSDGAESIPTVSFSPSPDTEVTTISHFPEK 2269
Query: 729 ETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNRNTITDLQP 788
TT +T +S + + S + P G W+ +S + ++ R TIT P
Sbjct: 2270 -TTHSFRTISSLTHELTS----RVTPIPGDWMSSAMSTKPTGASPSITLGERRTITSAAP 2324
Query: 789 SVKGV 793
+ +
Sbjct: 2325 TTSPI 2329
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 33.5 bits (75), Expect = 1.1
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 25/188 (13%)
Query: 579 LVDNILPLTLEETIQKTASVSQLNSEAFLLENKPVAENTGILKTNTLLSQESLMASSVSA 638
L+D +P L ++ ++ L E NK V EN + + LLS+ + S V
Sbjct: 703 LIDGKVPKDLLCNLELEGKITDLQKEL----NKEVEENEALREEVILLSELKSLPSEVER 758
Query: 639 PCNEKLIQDQFVDISFP--------SQVVNTNMQSVQL-----NTEDTVNTKSVNNTDAT 685
E IQD+ ++ S+VV+ + L T+D + T N
Sbjct: 759 LRKE--IQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTD 816
Query: 686 GLIQGVKSVEIEKDAQLKQFLTPKTEQLKPERVTSQVSNLKKKETTADSQTTTSKSLQNQ 745
Q K++ ++ + + K L ER+ ++ NL K+ DS K+ +
Sbjct: 817 QEFQNFKTLHMDFEQKYKMVLEEN------ERMNQEIVNLSKEAQKFDSSLGALKTELSY 870
Query: 746 SLKENQKK 753
+E Q+K
Sbjct: 871 KTQELQEK 878
>gi|5031579 A-kinase anchor protein 8 [Homo sapiens]
Length = 692
Score = 33.5 bits (75), Expect = 1.1
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 8/125 (6%)
Query: 101 HKPQKRKSLESSYKDSLLLANSKKTRNYIAIDGGKVLNSKHNGEVYDETSSNLPDSSGQQ 160
H +R + E K SL +A S +I K+L GE + + P+ G
Sbjct: 504 HNHNRRLAAEQFKKTSLHVAKSVLNNRHIV----KMLEKYLKGEDPFTSETVDPEMEGDD 559
Query: 161 NPIRTADSLERNEILEADTVDMATTKDPATVDVSGTGRPSPQNEGCTSKLEMPLE-SKCT 219
N + D E E + AD + T VD G G P+P++ G ++ E P + ++
Sbjct: 560 N-LGGEDKKETPEEVAADVLAEVITAAVRAVD--GEGAPAPESSGEPAEDEGPTDTAEAG 616
Query: 220 SFPQA 224
S PQA
Sbjct: 617 SDPQA 621
>gi|154813191 IQ motif containing E isoform 1 [Homo sapiens]
Length = 695
Score = 33.5 bits (75), Expect = 1.1
Identities = 62/303 (20%), Positives = 114/303 (37%), Gaps = 40/303 (13%)
Query: 672 DTVNTKSVNNTDATGLIQGVKSVEI-------EKDAQLKQFLTP-KTEQLKPERVTSQV- 722
D V T + DA+ +I G+K + EKD + + T KT L+ R+ +
Sbjct: 196 DFVRTLAEKRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETY 255
Query: 723 -SNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNRN 781
+ + +T S TT K + +++ +GS L+S S L + N++
Sbjct: 256 YEEVHRLQTLLASSETTGKKPLGEKKTGAKRQKKMGS---ALLSLSRSVQEL--TEENQS 310
Query: 782 TITDL------QPSVKGVNNFGGFKTKGINQKASHVSKK-----ARKSASKPPPISKPPA 830
DL P++ + + + ++ + KK + KS + P S PPA
Sbjct: 311 LKEDLDRVLSTSPTISKTQGYVEWSKPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPA 370
Query: 831 GPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSSYGNGI-SSANHEDLVEGQIHKLR 889
SS+ P K GA + + DL Q+ + +
Sbjct: 371 CLASSSALHRQPRGDR-----NKDHERLRGAVRDLKEERTALQEQLLQRDLEVKQLLQAK 425
Query: 890 LKLRKKLKA-------EKKKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNEL 942
L K+L+ +++ L Q+ T + + L+++ ++ DC + EL
Sbjct: 426 ADLEKELECAREGEEERREREEVLREEIQTLTSKLQELQEMKKE-EKEDCPEVPHKAQEL 484
Query: 943 PYP 945
P P
Sbjct: 485 PAP 487
>gi|154813193 IQ motif containing E isoform 2 [Homo sapiens]
Length = 679
Score = 33.5 bits (75), Expect = 1.1
Identities = 62/303 (20%), Positives = 114/303 (37%), Gaps = 40/303 (13%)
Query: 672 DTVNTKSVNNTDATGLIQGVKSVEI-------EKDAQLKQFLTP-KTEQLKPERVTSQV- 722
D V T + DA+ +I G+K + EKD + + T KT L+ R+ +
Sbjct: 180 DFVRTLAEKRPDASWVINGLKQRILKLEQQCKEKDGTISKLQTDMKTTNLEEMRIAMETY 239
Query: 723 -SNLKKKETTADSQTTTSKSLQNQSLKENQKKPFVGSWVKGLISRGASFMPLCVSAHNRN 781
+ + +T S TT K + +++ +GS L+S S L + N++
Sbjct: 240 YEEVHRLQTLLASSETTGKKPLGEKKTGAKRQKKMGS---ALLSLSRSVQEL--TEENQS 294
Query: 782 TITDL------QPSVKGVNNFGGFKTKGINQKASHVSKK-----ARKSASKPPPISKPPA 830
DL P++ + + + ++ + KK + KS + P S PPA
Sbjct: 295 LKEDLDRVLSTSPTISKTQGYVEWSKPRLLRRIVELEKKLSVMESSKSHAAEPVRSHPPA 354
Query: 831 GPPSSNGTAAHPHAHAASEVLEKSGSTSCGAQLNHSSYGNGI-SSANHEDLVEGQIHKLR 889
SS+ P K GA + + DL Q+ + +
Sbjct: 355 CLASSSALHRQPRGDR-----NKDHERLRGAVRDLKEERTALQEQLLQRDLEVKQLLQAK 409
Query: 890 LKLRKKLKA-------EKKKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIEDLLNEL 942
L K+L+ +++ L Q+ T + + L+++ ++ DC + EL
Sbjct: 410 ADLEKELECAREGEEERREREEVLREEIQTLTSKLQELQEMKKE-EKEDCPEVPHKAQEL 468
Query: 943 PYP 945
P P
Sbjct: 469 PAP 471
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 33.1 bits (74), Expect = 1.5
Identities = 54/266 (20%), Positives = 98/266 (36%), Gaps = 45/266 (16%)
Query: 804 INQKASHVSKKARKSASKPPPISKPPAGPPSSNGTAAHPHAHAASEVLEKSGSTSC---- 859
+ Q+ + + + R++ P P+S+P AG SS A P + T C
Sbjct: 72 VGQRGAQGAGRRRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGWLPESDCETVTCCLFSE 131
Query: 860 ---------------GAQLNHSSYGNGISSANHEDLVEGQIHKLRLKLRKKLKAEKKKLA 904
GA L + G + + L+E ++ + L K+LK ++ L
Sbjct: 132 RDAAGAPRDASDPLAGAALEPAGGGRSREARSRLLLLEQELKTVTYSLLKRLK--ERSLD 189
Query: 905 ALMSSPQSRTVRSENLEQVPQ-----DGSPNDCESIEDLL---NELPYPIDIASESAC-- 954
L+ + +SR VP+ G P + + L +L + +++ C
Sbjct: 190 TLLEAVESRGGVPGGCVLVPRADLRLGGQPAPPQLLLGRLFRWPDLQHAVELKPLCGCHS 249
Query: 955 --TTVPGVSLYSSQTHEEILAELLSPTPVSTELSENGEGDFRYLGMGDSHIP-------- 1004
G ++ + H L SP P + LS E ++ L + DS +
Sbjct: 250 FAAAADGPTVCCNPYHFSRLCGPESPPPPYSRLSPRDE--YKPLDLSDSTLSYTETEATN 307
Query: 1005 --PPVPSEFNDVSQNTHLRQDHNYCS 1028
P EF+D S + + ++CS
Sbjct: 308 SLITAPGEFSDASMSPDATKPSHWCS 333
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 32.7 bits (73), Expect = 1.9
Identities = 41/186 (22%), Positives = 75/186 (40%), Gaps = 32/186 (17%)
Query: 594 KTASVSQLNSEAFLLENKPVAENTGILKTNTLLSQESLMASSVSAPCNEKLIQDQFVDIS 653
KT VS++ + + +N KT +++ + V+ NEK ++ + D+S
Sbjct: 418 KTMDVSKVKLKKTKKREADLPDNITNEKTEI---EQTKIKGDVAGKKNEKSVKAEKRDVS 474
Query: 654 FPSQVVNTNMQSVQLNTEDTVNTKSVNNTDATGLIQGVKSVEIEKDAQLKQFLTPKTEQL 713
+ N N+ +Q+ T KSV + G S + K + K+ L + L
Sbjct: 475 KEKKPSN-NVSVIQVTTR---TRKSVTEVKEMDVHTGSNSEKFSKTKKSKRKLEVDSHSL 530
Query: 714 ------------KPERVTSQVSNLK-------------KKETTADSQTTTSKSLQNQSLK 748
K ++V S+ N KK+ T ++T K+L+N+S K
Sbjct: 531 HGPVNDEESSTKKKKKVESKSKNNSQEVPKGDSKVEENKKQNTCMKKSTKKKTLKNKSSK 590
Query: 749 ENQKKP 754
++ K P
Sbjct: 591 KSSKPP 596
>gi|21450838 SH3 and cysteine rich domain 3 [Homo sapiens]
Length = 364
Score = 32.7 bits (73), Expect = 1.9
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 838 TAAHPHAHAASEVLEKSGSTSCGAQLNHSS--YGN-------GISSANHEDLVEGQIHK- 887
T H H + E+ G G +SS Y N +S+AN D V +
Sbjct: 125 TNIHEHCQSYVEMQRCFGKIPPGFHRAYSSPLYSNQQYACVKDLSAANRNDPVFETLRTG 184
Query: 888 --LRLKLRKKLKAEKKKLAALMSSPQSRTVRSENLEQVPQDGSPNDCESIE 936
+ K RKK +A+KK A M + + R E E PQDG+P + E
Sbjct: 185 VIMANKERKKGQADKKNPVAAMMEEEPESARPE--EGKPQDGNPEGDKKAE 233
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,467,322
Number of Sequences: 37866
Number of extensions: 2071003
Number of successful extensions: 7909
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 7817
Number of HSP's gapped (non-prelim): 224
length of query: 1092
length of database: 18,247,518
effective HSP length: 113
effective length of query: 979
effective length of database: 13,968,660
effective search space: 13675318140
effective search space used: 13675318140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.