Guide to the Human Genome
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Name: AKAP8 Sequence: fasta or formatted (692aa) NCBI GI: 5031579
Description:

A-kinase anchor protein 8

Referenced in:

Cyclic Nucleotides

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         66           3
 C cysteine            1.4         10           1
 D aspartate           7.8         54           2
 E glutamate           9.7         67           2
 F phenylalanine       3.9         27           2
 G glycine            10.4         72           4
 H histidine           1.9         13           1
 I isoleucine          1.9         13           1
 K lysine              5.5         38           2
 L leucine             4.6         32           2
 M methionine          2.5         17           2
 N asparagine          3.0         21           2
 P proline             6.8         47           3
 Q glutamine           4.6         32           1
 R arginine            7.5         52           3
 S serine              7.2         50           2
 T threonine           4.2         29           2
 V valine              3.6         25           1
 W tryptophan          0.6          4           1
 Y tyrosine            3.3         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A-kinase anchor protein 8 
AKAP8L                0.196   A kinase (PRKA) anchor protein 8-like 
ZNF326                0.108   zinc finger protein 326 isoform 1 
EIF5B                 0.016   eukaryotic translation initiation factor 5B 
CENPE                 0.014   centromere protein E 
LOC100286959          0.014   PREDICTED: hypothetical protein XP_002343921 
BASP1                 0.014   brain abundant, membrane attached signal protein 1 [...
ZC3H13                0.014   zinc finger CCCH-type containing 13 
ERICH1                0.014   glutamate-rich 1 
RP1L1                 0.013   retinitis pigmentosa 1-like 1 
RBM25                 0.013   RNA binding motif protein 25 
LOC100133599          0.013   PREDICTED: hypothetical protein 
ZNF131                0.013   zinc finger protein 131 
LOC100131202          0.012   PREDICTED: hypothetical protein 
PRPF38B               0.012   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
TCHHL1                0.012   trichohyalin-like 1 
CLSPN                 0.012   claspin 
LOC100288837          0.012   PREDICTED: hypothetical protein XP_002343931, parti...
SFRS12                0.012   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.012   splicing factor, arginine/serine-rich 12 isoform b [...
RSRC2                 0.011   arginine/serine-rich coiled-coil 2 isoform a 
APP                   0.011   amyloid beta A4 protein isoform c precursor 
APP                   0.011   amyloid beta A4 protein isoform e precursor 
MARCKS                0.011   myristoylated alanine-rich protein kinase C substra...
FUS                   0.011   fusion (involved in t(12;16) in malignant liposarcoma...
MPHOSPH10             0.011   M-phase phosphoprotein 10 
DIDO1                 0.011   death inducer-obliterator 1 isoform c 
LOC727838             0.010   PREDICTED: similar to cancer/testis antigen family ...
SRRT                  0.010   arsenate resistance protein 2 isoform e 
SRRT                  0.010   arsenate resistance protein 2 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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