Guide to the Human Genome
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Name: SFRP4 Sequence: fasta or formatted (346aa) NCBI GI: 170784838
Description:

secreted frizzled-related protein 4

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         19           1
 C cysteine            5.5         19           1
 D aspartate           4.9         17           2
 E glutamate           5.8         20           2
 F phenylalanine       1.4          5           2
 G glycine             1.7          6           1
 H histidine           2.9         10           2
 I isoleucine          5.8         20           1
 K lysine              8.1         28           3
 L leucine             8.7         30           2
 M methionine          3.5         12           2
 N asparagine          3.5         12           1
 P proline             8.7         30           2
 Q glutamine           4.0         14           1
 R arginine            7.2         25           2
 S serine              6.6         23           3
 T threonine           4.6         16           2
 V valine              7.2         25           2
 W tryptophan          2.0          7           1
 Y tyrosine            2.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   secreted frizzled-related  protein 4 
FRZB                  0.415   frizzled-related protein 
FZD5                  0.154   frizzled 5 precursor 
FZD8                  0.137   frizzled 8 
FZD9                  0.135   frizzled 9 
FZD1                  0.135   frizzled 1 
FZD7                  0.134   frizzled 7 
FZD2                  0.131   frizzled 2 
FZD10                 0.125   frizzled 10 
FZD4                  0.114   frizzled 4 
FZD3                  0.111   frizzled 3 
FZD6                  0.091   frizzled 6 
SFRP1                 0.090   secreted frizzled-related protein 1 
CORIN                 0.084   corin 
SFRP2                 0.080   secreted frizzled-related protein 2 precursor 
SFRP5                 0.078   secreted frizzled-related protein 5 
MFRP                  0.058   membrane frizzled-related protein 
CPZ                   0.044   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.044   carboxypeptidase Z isoform 1 
COL18A1               0.041   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
SMO                   0.026   smoothened 
GABBR1                0.017   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.017   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.017   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
TTN                   0.014   titin isoform N2-A 
KIAA1598              0.013   shootin1 isoform a 
KIAA1598              0.013   shootin1 isoform b 
PDS5B                 0.013   PDS5, regulator of cohesion maintenance, homolog B [H...
CNTROB                0.013   centrobin, centrosomal BRCA2 interacting protein is...
CNTROB                0.013   centrobin, centrosomal BRCA2 interacting protein iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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