Guide to the Human Genome
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Name: GABBR1 Sequence: fasta or formatted (899aa) NCBI GI: 167000400
Description:

gamma-aminobutyric acid (GABA) B receptor 1 isoform c precursor

Referenced in:

GABA and Glycine

Other entries for this name:
alt prot [961aa] gamma-aminobutyric acid (GABA) B receptor 1 isoform a precursor
alt prot [844aa] gamma-aminobutyric acid (GABA) B receptor 1 isoform b precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         56           2
 C cysteine            1.7         15           1
 D aspartate           4.0         36           2
 E glutamate           6.7         60           3
 F phenylalanine       4.2         38           2
 G glycine             6.8         61           4
 H histidine           2.0         18           2
 I isoleucine          5.9         53           2
 K lysine              5.6         50           2
 L leucine            10.5         94           6
 M methionine          2.0         18           1
 N asparagine          3.8         34           3
 P proline             5.3         48           2
 Q glutamine           3.7         33           2
 R arginine            5.9         53           2
 S serine              7.5         67           3
 T threonine           6.1         55           2
 V valine              6.5         58           2
 W tryptophan          2.3         21           2
 Y tyrosine            3.4         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) B receptor 1 isoform... 
GABBR1                0.891   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.882   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR2                0.248   G protein-coupled receptor 51 
GPR156                0.052   G protein-coupled receptor 156 
NPR2                  0.022   natriuretic peptide receptor B precursor 
GRM4                  0.022   glutamate receptor, metabotropic 4 
GRM8                  0.019   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.019   glutamate receptor, metabotropic 8 isoform a precur...
TAS1R3                0.019   taste receptor, type 1, member 3 
GRM5                  0.017   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.017   glutamate receptor, metabotropic 5 isoform b precurso...
GRM7                  0.017   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.017   glutamate receptor, metabotropic 7 isoform a precurso...
TAS1R1                0.017   sweet taste receptor T1r isoform b 
TAS1R1                0.017   sweet taste receptor T1r isoform a 
NPR1                  0.016   natriuretic peptide receptor 1 
GRM6                  0.016   glutamate receptor, metabotropic 6 precursor 
GRM2                  0.015   glutamate receptor, metabotropic 2 isoform b 
GRM2                  0.015   glutamate receptor, metabotropic 2 isoform a precurs...
CASR                  0.014   calcium-sensing receptor 
NPR3                  0.013   natriuretic peptide receptor C/guanylate cyclase C (a...
GRM1                  0.013   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.013   glutamate receptor, metabotropic 1 isoform alpha pr...
GPR179                0.013   GPR158-like 1 
TAS1R2                0.011   taste receptor, type 1, member 2 
GPRC6A                0.011   G protein-coupled receptor, family C, group 6, memb...
GRM3                  0.010   glutamate receptor, metabotropic 3 precursor 
KIAA1598              0.009   shootin1 isoform a 
KIAA1598              0.009   shootin1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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