Guide to the Human Genome
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Name: FZD6 Sequence: fasta or formatted (706aa) NCBI GI: 34734079
Description:

frizzled 6

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         39           2
 C cysteine            4.2         30           1
 D aspartate           3.7         26           1
 E glutamate           5.8         41           2
 F phenylalanine       5.8         41           2
 G glycine             6.7         47           3
 H histidine           2.7         19           1
 I isoleucine          5.5         39           2
 K lysine              6.1         43           3
 L leucine             9.9         70           3
 M methionine          2.5         18           1
 N asparagine          2.4         17           2
 P proline             5.0         35           2
 Q glutamine           3.5         25           1
 R arginine            4.4         31           2
 S serine              7.9         56           3
 T threonine           6.5         46           1
 V valine              6.9         49           2
 W tryptophan          1.7         12           2
 Y tyrosine            3.1         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   frizzled 6 
FZD3                  0.460   frizzled 3 
FZD2                  0.304   frizzled 2 
FZD1                  0.304   frizzled 1 
FZD7                  0.302   frizzled 7 
FZD10                 0.240   frizzled 10 
FZD5                  0.229   frizzled 5 precursor 
FZD9                  0.227   frizzled 9 
FZD4                  0.203   frizzled 4 
FZD8                  0.166   frizzled 8 
SMO                   0.096   smoothened 
SFRP4                 0.045   secreted frizzled-related  protein 4 
FRZB                  0.043   frizzled-related protein 
CORIN                 0.040   corin 
SFRP1                 0.039   secreted frizzled-related protein 1 
SFRP2                 0.038   secreted frizzled-related protein 2 precursor 
SFRP5                 0.035   secreted frizzled-related protein 5 
MFRP                  0.031   membrane frizzled-related protein 
CPZ                   0.027   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.027   carboxypeptidase Z isoform 1 
BAI1                  0.018   brain-specific angiogenesis inhibitor 1 precursor [...
BAI2                  0.016   brain-specific angiogenesis inhibitor 2 
BAI3                  0.015   brain-specific angiogenesis inhibitor 3 
LPHN3                 0.013   latrophilin 3 precursor 
GPR133                0.012   G protein-coupled receptor 133 
GPR155                0.012   G protein-coupled receptor 155 isoform 9 
GPR155                0.012   G protein-coupled receptor 155 isoform 10 
COL18A1               0.008   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
PDLIM2                0.007   PDZ and LIM domain 2 isoform 3 
PDLIM2                0.007   PDZ and LIM domain 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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