Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FZD5 Sequence: fasta or formatted (585aa) NCBI GI: 27894385
Description:

frizzled 5 precursor

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         53           4
 C cysteine            4.8         28           3
 D aspartate           2.6         15           1
 E glutamate           4.1         24           1
 F phenylalanine       4.8         28           2
 G glycine             7.5         44           2
 H histidine           2.6         15           1
 I isoleucine          4.4         26           2
 K lysine              3.1         18           1
 L leucine            10.4         61           6
 M methionine          2.4         14           1
 N asparagine          1.9         11           1
 P proline             8.4         49           2
 Q glutamine           2.6         15           1
 R arginine            5.6         33           2
 S serine              6.8         40           2
 T threonine           5.5         32           2
 V valine              7.2         42           2
 W tryptophan          2.4         14           2
 Y tyrosine            3.9         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   frizzled 5 precursor 
FZD8                  0.634   frizzled 8 
FZD2                  0.438   frizzled 2 
FZD7                  0.423   frizzled 7 
FZD1                  0.410   frizzled 1 
FZD10                 0.382   frizzled 10 
FZD9                  0.375   frizzled 9 
FZD4                  0.343   frizzled 4 
FZD3                  0.283   frizzled 3 
FZD6                  0.272   frizzled 6 
SMO                   0.131   smoothened 
FRZB                  0.095   frizzled-related protein 
SFRP4                 0.090   secreted frizzled-related  protein 4 
SFRP5                 0.066   secreted frizzled-related protein 5 
SFRP2                 0.066   secreted frizzled-related protein 2 precursor 
SFRP1                 0.056   secreted frizzled-related protein 1 
CORIN                 0.051   corin 
MFRP                  0.036   membrane frizzled-related protein 
CPZ                   0.036   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.033   carboxypeptidase Z isoform 1 
COL18A1               0.017   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
GPR64                 0.012   G protein-coupled receptor 64 isoform 3 
GPR64                 0.012   G protein-coupled receptor 64 isoform 2 
GPR64                 0.012   G protein-coupled receptor 64 isoform 1 
GPR64                 0.012   G protein-coupled receptor 64 isoform 4 
CELSR3                0.012   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
GPR126                0.011   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.011   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.011   G protein-coupled receptor 126 alpha 2 precursor [Ho...
GPR126                0.011   G protein-coupled receptor 126 beta 2 precursor [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press