Guide to the Human Genome
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Name: FZD4 Sequence: fasta or formatted (537aa) NCBI GI: 22547161
Description:

frizzled 4

Referenced in:

Wnt Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         35           2
 C cysteine            3.9         21           1
 D aspartate           3.2         17           2
 E glutamate           5.4         29           3
 F phenylalanine       5.0         27           2
 G glycine             8.0         43           2
 H histidine           1.7          9           1
 I isoleucine          6.9         37           2
 K lysine              4.7         25           1
 L leucine            11.0         59           5
 M methionine          3.4         18           1
 N asparagine          3.5         19           1
 P proline             4.8         26           2
 Q glutamine           2.6         14           1
 R arginine            3.9         21           2
 S serine              6.9         37           2
 T threonine           5.4         29           2
 V valine              7.1         38           2
 W tryptophan          2.8         15           2
 Y tyrosine            3.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   frizzled 4 
FZD9                  0.485   frizzled 9 
FZD10                 0.485   frizzled 10 
FZD2                  0.397   frizzled 2 
FZD1                  0.388   frizzled 1 
FZD7                  0.381   frizzled 7 
FZD5                  0.381   frizzled 5 precursor 
FZD8                  0.288   frizzled 8 
FZD3                  0.274   frizzled 3 
FZD6                  0.267   frizzled 6 
SMO                   0.135   smoothened 
SFRP2                 0.075   secreted frizzled-related protein 2 precursor 
SFRP4                 0.074   secreted frizzled-related  protein 4 
CORIN                 0.073   corin 
FRZB                  0.073   frizzled-related protein 
SFRP1                 0.071   secreted frizzled-related protein 1 
SFRP5                 0.068   secreted frizzled-related protein 5 
MFRP                  0.039   membrane frizzled-related protein 
CPZ                   0.029   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.026   carboxypeptidase Z isoform 1 
COL18A1               0.013   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
GPR126                0.008   G protein-coupled receptor 126 alpha 1 precursor [Ho...
GPR126                0.008   G protein-coupled receptor 126 beta 1 precursor [Hom...
GPR126                0.008   G protein-coupled receptor 126 alpha 2 precursor [Ho...
GPR126                0.008   G protein-coupled receptor 126 beta 2 precursor [Hom...
GPR155                0.007   G protein-coupled receptor 155 isoform 9 
GPR155                0.007   G protein-coupled receptor 155 isoform 10 
SLC35F3               0.007   solute carrier family 35, member F3 
OR2AG2                0.007   olfactory receptor, family 2, subfamily AG, member 2...
GPR133                0.006   G protein-coupled receptor 133 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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