Guide to the Human Genome
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Name: ARMC9 Sequence: fasta or formatted (665aa) NCBI GI: 156151430
Description:

armadillo repeat containing 9

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         38           2
 C cysteine            1.2          8           1
 D aspartate           6.8         45           3
 E glutamate           8.1         54           2
 F phenylalanine       3.8         25           2
 G glycine             5.3         35           2
 H histidine           2.3         15           1
 I isoleucine          5.0         33           2
 K lysine              7.1         47           2
 L leucine            14.6         97           2
 M methionine          2.3         15           1
 N asparagine          3.3         22           1
 P proline             3.8         25           1
 Q glutamine           4.8         32           2
 R arginine            4.7         31           2
 S serine              7.1         47           3
 T threonine           5.0         33           2
 V valine              5.3         35           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.5         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   armadillo repeat containing 9 
WDR91                 0.022   WD repeat domain 91 
CTNNB1                0.010   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.010   catenin (cadherin-associated protein), beta 1, 88kD...
CTNNB1                0.010   catenin (cadherin-associated protein), beta 1, 88kDa ...
SECISBP2L             0.009   SECIS binding protein 2-like 
CASZ1                 0.008   castor homolog 1, zinc finger isoform a 
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
LAS1L                 0.008   LAS1-like 
PKP1                  0.007   plakophilin 1 isoform 1b 
PKP1                  0.007   plakophilin 1 isoform 1a 
LOC652798             0.007   PREDICTED: similar to plakophilin 1, partial 
C14orf37              0.007   hypothetical protein LOC145407 
MTERFD2               0.006   MTERF domain containing 2 
EIF3D                 0.006   eukaryotic translation initiation factor 3 subunit D ...
ANP32A                0.006   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isof...
NES                   0.006   nestin 
CENPB                 0.006   centromere protein B 
TIMELESS              0.006   timeless homolog 
LOC647020             0.006   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.006   PREDICTED: similar to acidic (leucine-rich) nuclear...
TAF7L                 0.006   TATA box binding protein-associated factor, RNA poly...
ANP32E                0.006   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.006   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
NCL                   0.005   nucleolin 
ATAD2                 0.005   ATPase family, AAA domain containing 2 
MYH11                 0.005   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.005   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.005   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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