DEPDC1 26998

Name: DEPDC1	Sequence: fasta or formatted (527aa)		NCBI GI: 38488716
Description: DEP domain containing 1 isoform b		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [811aa] DEP domain containing 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 23 2 C cysteine 1.5 8 2 D aspartate 4.9 26 2 E glutamate 7.2 38 2 F phenylalanine 4.2 22 1 G glycine 3.8 20 1 H histidine 2.7 14 2 I isoleucine 5.7 30 2 K lysine 7.2 38 2 L leucine 12.5 66 3 M methionine 2.7 14 1 N asparagine 5.9 31 2 P proline 6.3 33 3 Q glutamine 5.3 28 2 R arginine 6.8 36 2 S serine 5.3 28 1 T threonine 4.2 22 2 V valine 4.9 26 2 W tryptophan 1.1 6 1 Y tyrosine 3.4 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEP domain containing 1 isoform b DEPDC1 0.575 DEP domain containing 1 isoform a DEPDC1B 0.502 DEP domain containing 1B isoform 1 DEPDC1B 0.416 DEP domain containing 1B isoform 2 DEPDC7 0.099 novel 58.3 KDA protein isoform 1 DEPDC7 0.097 novel 58.3 KDA protein isoform 2 ARHGAP19 0.038 Rho GTPase activating protein 19 DEPDC4 0.035 DEP domain containing 4 SH3BP1 0.024 SH3-domain binding protein 1 ARHGAP6 0.022 Rho GTPase activating protein 6 isoform 4 ARHGAP6 0.022 Rho GTPase activating protein 6 isoform 3 ARHGAP6 0.022 Rho GTPase activating protein 6 isoform 1 STARD8 0.020 StAR-related lipid transfer (START) domain containi... STARD8 0.020 StAR-related lipid transfer (START) domain containi... STARD8 0.020 StAR-related lipid transfer (START) domain containin... RICS 0.019 Rho GTPase-activating protein isoform 1 RICS 0.019 Rho GTPase-activating protein isoform 2 STARD13 0.019 StAR-related lipid transfer (START) domain containin... STARD13 0.019 StAR-related lipid transfer (START) domain containin... STARD13 0.019 StAR-related lipid transfer (START) domain containin... ARHGAP30 0.018 Rho GTPase activating protein 30 isoform 2 ARHGAP30 0.018 Rho GTPase activating protein 30 isoform 1 ARHGAP12 0.018 Rho GTPase activating protein 12 SNX26 0.017 sorting nexin 26 RICH2 0.017 Rho GTPase-activating protein RICH2 ARHGAP28 0.017 Rho GTPase activating protein 28 isoform a ARHGAP28 0.017 Rho GTPase activating protein 28 isoform b DLC1 0.016 deleted in liver cancer 1 isoform 1 DLC1 0.016 deleted in liver cancer 1 isoform 2 ARHGAP17 0.015 nadrin isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.