Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 170172518
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170172518 microtubule associated monoxygenase, calponin and
LIM domain containing 3 isoform 3 [Homo sapiens]
(966 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170172518 microtubule associated monoxygenase, calponin and L... 1944 0.0
gi|209862789 microtubule associated monoxygenase, calponin and L... 1873 0.0
gi|209862793 microtubule associated monoxygenase, calponin and L... 1494 0.0
gi|7662284 microtubule associated monoxygenase, calponin and LIM... 997 0.0
gi|205360947 microtubule associated monoxygenase, calponin and L... 726 0.0
gi|226530313 microtubule associated monoxygenase, calponin and L... 388 e-107
gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens] 147 4e-35
gi|31324577 molecule interacting with Rab13 [Homo sapiens] 123 7e-28
gi|67782321 spectrin beta isoform a [Homo sapiens] 103 6e-22
gi|67782319 spectrin beta isoform b [Homo sapiens] 103 6e-22
gi|150378549 tangerin [Homo sapiens] 101 4e-21
gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens] 100 5e-21
gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo ... 98 3e-20
gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo ... 98 3e-20
gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens] 97 7e-20
gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens] 97 7e-20
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens] 97 7e-20
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 97 7e-20
gi|4501893 actinin, alpha 2 [Homo sapiens] 97 9e-20
gi|4557241 actinin, alpha 3 [Homo sapiens] 96 2e-19
gi|194097352 actinin, alpha 1 isoform c [Homo sapiens] 95 4e-19
gi|194097350 actinin, alpha 1 isoform a [Homo sapiens] 95 4e-19
gi|4501891 actinin, alpha 1 isoform b [Homo sapiens] 95 4e-19
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 94 5e-19
gi|12025678 actinin, alpha 4 [Homo sapiens] 92 3e-18
gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo sa... 91 4e-18
gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo sa... 91 4e-18
gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens] 88 4e-17
gi|224451082 cytospin A [Homo sapiens] 87 8e-17
gi|224451080 cytospin A [Homo sapiens] 87 8e-17
>gi|170172518 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 3 [Homo sapiens]
Length = 966
Score = 1944 bits (5037), Expect = 0.0
Identities = 966/966 (100%), Positives = 966/966 (100%)
Query: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW
Sbjct: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
Query: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA
Sbjct: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
Query: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN
Sbjct: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
Query: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK
Sbjct: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
Query: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV
Sbjct: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
Query: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH
Sbjct: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
Query: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD
Sbjct: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
Query: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR
Sbjct: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
Query: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV
Sbjct: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
Query: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE
Sbjct: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
Query: 601 MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT 660
MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT
Sbjct: 601 MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT 660
Query: 661 ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN 720
ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN
Sbjct: 661 ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN 720
Query: 721 KVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAE 780
KVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAE
Sbjct: 721 KVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAE 780
Query: 781 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE 840
GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE
Sbjct: 781 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE 840
Query: 841 AKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSL 900
AKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSL
Sbjct: 841 AKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSL 900
Query: 901 RQAEALQEVPEETQAEHNLSSVLDTGAEEDVASRDWVSPWLPRMVSNSWAQMIHPPQPPT 960
RQAEALQEVPEETQAEHNLSSVLDTGAEEDVASRDWVSPWLPRMVSNSWAQMIHPPQPPT
Sbjct: 901 RQAEALQEVPEETQAEHNLSSVLDTGAEEDVASRDWVSPWLPRMVSNSWAQMIHPPQPPT 960
Query: 961 VLGSQM 966
VLGSQM
Sbjct: 961 VLGSQM 966
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 1873 bits (4851), Expect = 0.0
Identities = 940/963 (97%), Positives = 942/963 (97%), Gaps = 4/963 (0%)
Query: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW
Sbjct: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
Query: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA
Sbjct: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
Query: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN
Sbjct: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
Query: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK
Sbjct: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
Query: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV
Sbjct: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
Query: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH
Sbjct: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
Query: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD
Sbjct: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
Query: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR
Sbjct: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
Query: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV
Sbjct: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
Query: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE
Sbjct: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
Query: 601 MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT 660
MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT
Sbjct: 601 MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT 660
Query: 661 ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN 720
ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN
Sbjct: 661 ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN 720
Query: 721 KVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAE 780
KVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAE
Sbjct: 721 KVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAE 780
Query: 781 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE 840
GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE
Sbjct: 781 GKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKE 840
Query: 841 AKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSL 900
AKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSL
Sbjct: 841 AKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSL 900
Query: 901 RQAEALQEVPEETQAEHNLSSVLDTGAEEDVASRDWVSPWLPRMVSNSWAQMIHPPQPPT 960
RQAEALQEVPEETQAEHNLSSVLDTGAEEDVAS S M + P PP+
Sbjct: 901 RQAEALQEVPEETQAEHNLSSVLDTGAEEDVASSSSES----EMEEEGEEEEEEPRLPPS 956
Query: 961 VLG 963
LG
Sbjct: 957 DLG 959
>gi|209862793 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 2 [Homo sapiens]
Length = 1073
Score = 1494 bits (3869), Expect = 0.0
Identities = 748/752 (99%), Positives = 749/752 (99%)
Query: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW
Sbjct: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
Query: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA
Sbjct: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
Query: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN
Sbjct: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
Query: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK
Sbjct: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
Query: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV
Sbjct: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
Query: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH
Sbjct: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
Query: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD
Sbjct: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
Query: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR
Sbjct: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
Query: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV
Sbjct: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
Query: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE
Sbjct: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
Query: 601 MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT 660
MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT
Sbjct: 601 MASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQT 660
Query: 661 ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN 720
ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN
Sbjct: 661 ISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQN 720
Query: 721 KVKYMATQLLAKFEENAPAQSIGIRRQGSMKK 752
KVKYMATQLLAKFEENAPAQSIGIRRQ K+
Sbjct: 721 KVKYMATQLLAKFEENAPAQSIGIRRQQREKE 752
Score = 267 bits (682), Expect = 4e-71
Identities = 141/215 (65%), Positives = 156/215 (72%), Gaps = 18/215 (8%)
Query: 671 KEKDLDGAGKRRKTSQSEEEEAPRG------------HRGERPTLVSTLTDRRMDVAV-- 716
++ D D GK+ + E E PR RP S+ + R+ + +
Sbjct: 783 RDLDADNRGKQSPHHERPEPEPPRRFFVDQWELSLSLRSSARPASPSSDSLRQKYIKMYT 842
Query: 717 -GNQNKVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVME 775
G + + +A QL K + P + + GSMKKEFPQNLGGSDTCYFCQKRVYVME
Sbjct: 843 GGVSSLAEQIANQLQRKEQ---PKALLDKKELGSMKKEFPQNLGGSDTCYFCQKRVYVME 899
Query: 776 RLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAP 835
RLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAP
Sbjct: 900 RLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAP 959
Query: 836 LSGKEAKGPLQDGATTDANGRANAVASSTERTPGS 870
LSGKEAKGPLQDGATTDANGRANAVASSTERTPGS
Sbjct: 960 LSGKEAKGPLQDGATTDANGRANAVASSTERTPGS 994
>gi|7662284 microtubule associated monoxygenase, calponin and LIM
domain containing 2 [Homo sapiens]
Length = 1124
Score = 997 bits (2578), Expect = 0.0
Identities = 511/744 (68%), Positives = 602/744 (80%), Gaps = 11/744 (1%)
Query: 1 MEERKHETMNPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYW 60
M E + E A +F+ FVQA+TCKGTL+AF L HL+L P D+R+FY KLKSK+ W
Sbjct: 1 MGENEDEKQAQAGQVFENFVQASTCKGTLQAFNILTRHLDLDPLDHRNFYSKLKSKVTTW 60
Query: 61 KAKALWAKLDKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDA 120
KAKALW KLDKRGSHK+YK+GK+CTNTKCLI+G GPCGLRTAI+L+ LGAKVVV+EKRD+
Sbjct: 61 KAKALWYKLDKRGSHKEYKRGKSCTNTKCLIVGGGPCGLRTAIELAYLGAKVVVVEKRDS 120
Query: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVN 180
FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAG+IDHISIRQLQLIL KVAL+LG+EIHVN
Sbjct: 121 FSRNNVLHLWPFTIHDLRGLGAKKFYGKFCAGSIDHISIRQLQLILFKVALMLGVEIHVN 180
Query: 181 VEFQGLIQPPEDQENERIGWRALVHPKTHPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGK 240
VEF +++PPEDQEN++IGWRA P H +SE+EF+VIIG DGRRNTLEGFRRKEFRGK
Sbjct: 181 VEFVKVLEPPEDQENQKIGWRAEFLPTDHSLSEFEFDVIIGADGRRNTLEGFRRKEFRGK 240
Query: 241 LAIAITANFINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFV 300
LAIAITANFINRN+TAEAKVEEISGVAFIFNQKFFQ+L+E TGIDLENIVYYKD THYFV
Sbjct: 241 LAIAITANFINRNSTAEAKVEEISGVAFIFNQKFFQDLKEETGIDLENIVYYKDCTHYFV 300
Query: 301 MTAKKQSLLDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINH 360
MTAKKQSLLDKGVI++DY DTE+LL ENV+Q+ LLSYAREAADF+T QLPSLDFA+NH
Sbjct: 301 MTAKKQSLLDKGVIINDYIDTEMLLCAENVNQDNLLSYAREAADFATNYQLPSLDFAMNH 360
Query: 361 YGQPDVAMFDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMD 420
YGQPDVAMFDFTCMYASENAALVRE+ HQLLVALVGDSLLEPFWPMGTG ARGFLAA D
Sbjct: 361 YGQPDVAMFDFTCMYASENAALVRERQAHQLLVALVGDSLLEPFWPMGTGCARGFLAAFD 420
Query: 421 SAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLR 480
+AWMV+SW+ GT PLE+LAERES+YRLLPQTTPEN++KNF QY++DP TRYPN+N + +R
Sbjct: 421 TAWMVKSWNQGTPPLELLAERESLYRLLPQTTPENINKNFEQYTLDPGTRYPNLNSHCVR 480
Query: 481 PSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNV 540
P QV+HLY T E + H +E L + R + L+R ES R SKLL WCQ+QT+GY VNV
Sbjct: 481 PHQVKHLYITKELE--HYPLERLGSVRRSVNLSRKESDIRPSKLLTWCQQQTEGYQHVNV 538
Query: 541 TDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKE 600
TDLT SW+SGLALCAIIHR+RP+LI+FDSL+E + +NNQLAFD+AE+E GI P+ TGKE
Sbjct: 539 TDLTTSWRSGLALCAIIHRFRPELINFDSLNEDDAVENNQLAFDVAEREFGIPPVTTGKE 598
Query: 601 MASVGEPDKLSMVMYLTQFYEMFKDS-LPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQ 659
MAS EPDKLSMVMYL++FYE+F+ + L D+ N E A L + +S IS + L
Sbjct: 599 MASAQEPDKLSMVMYLSKFYELFRGTPLRPVDSWRKNYGENADL-SLAKSSIS-NNYLNL 656
Query: 660 TISRKRSPK-DKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGN 718
T RKR+P+ D + + D +RRK + +E + R + + + GN
Sbjct: 657 TFPRKRTPRVDGQTGENDMNKRRRKGFTNLDEPSNFSSRS-----LGSNQECGSSKEGGN 711
Query: 719 QNKVKYMATQLLAKFEENAPAQSI 742
QNKVK MA QLLAKFEE+ S+
Sbjct: 712 QNKVKSMANQLLAKFEESTRNPSL 735
Score = 137 bits (346), Expect = 4e-32
Identities = 85/209 (40%), Positives = 113/209 (54%), Gaps = 17/209 (8%)
Query: 636 NAEEKAVLIASTRS----PISFLSKLGQTISRKRSPKDKKEKDLDGAGKRRKTSQS---- 687
N +EKA +AS P + L G + + SP + A T S
Sbjct: 867 NIKEKAAHLASMFGHGDFPQNKLLSKGLSHTHPPSPPSRLPSPDPAASSSPSTVDSASPA 926
Query: 688 -EEEEAPRG---HRGERPTLVSTLTDRRMDVAVGNQNKVKYMATQLLAKFEENAPAQSIG 743
+E+++P G H T+ LT ++ +G +V + + A A S
Sbjct: 927 RKEKKSPSGFHFHPSHLRTVHPQLTVGKVSSGIGAAAEV--LVNLYMNDHRPKAQATSPD 984
Query: 744 IRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAY 803
+ SM+K FP NLGGSDTCYFC+KRVYVMERLSAEG FFHR CF+C CATTLRL+AY
Sbjct: 985 LE---SMRKSFPLNLGGSDTCYFCKKRVYVMERLSAEGHFFHRECFRCSICATTLRLAAY 1041
Query: 804 AYDIEDGKFYCKPHYCYRLSGYAQRKRPA 832
+D ++GKFYCKPH+ + + QRKR A
Sbjct: 1042 TFDCDEGKFYCKPHFIHCKTNSKQRKRRA 1070
>gi|205360947 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 1 [Homo sapiens]
Length = 1067
Score = 726 bits (1875), Expect = 0.0
Identities = 402/892 (45%), Positives = 526/892 (58%), Gaps = 79/892 (8%)
Query: 10 NPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYWKAKALWAKL 69
NPAH F+ F+QA C+ L +FQELC L L+P YHK+K +LNYW AK+LW KL
Sbjct: 8 NPAHAHFESFLQAQLCQDVLSSFQELCGALGLEPGGGLPQYHKIKDQLNYWSAKSLWTKL 67
Query: 70 DKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNVLHL 129
DKR Y++G+ACT+TKCL++GAGPCGLR A++L+LLGA+VV++EKR FSR+NVLHL
Sbjct: 68 DKRAGQPVYQQGRACTSTKCLVVGAGPCGLRVAVELALLGARVVLVEKRTKFSRHNVLHL 127
Query: 130 WPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVNVEFQGLIQP 189
WPFTIHDLR LGAKKFYG+FC G +DHISIRQLQL+LLKVAL+LG+EIH V F GL P
Sbjct: 128 WPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVTFTGLQPP 187
Query: 190 PEDQENERIGWRALVHPKTHP-VSEYEFEVIIGGDGRRNTLEGFRRKEFRGKLAIAITAN 248
P GWRA + P ++ YEF+V+I G + EGF+ +E RGKLAI ITAN
Sbjct: 188 PRKGS----GWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGFKVREMRGKLAIGITAN 243
Query: 249 FINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFVMTAKKQSL 308
F+N T E +V EISGVA I+NQ FFQ L +ATGIDLENIVYYKDDTHYFVMTAKKQ L
Sbjct: 244 FVNGRTVEETQVPEISGVARIYNQSFFQSLLKATGIDLENIVYYKDDTHYFVMTAKKQCL 303
Query: 309 LDKGVILHDYADTELLLSRENVDQEALLSYAREAADFSTQQQLPSLDFAINHYGQPDVAM 368
L GV+ D+ DT LL NV EAL + R AADF+T +L L+FA + +GQPDV+
Sbjct: 304 LRLGVLRQDWPDTNRLLGSANVVPEALQRFTRAAADFATHGKLGKLEFAQDAHGQPDVSA 363
Query: 369 FDFTCMYASENAALVREQNGHQLLVALVGDSLLEPFWPMGTGIARGFLAAMDSAWMVRSW 428
FDFT M +E++A V+E++G +LL+ LVGD L+EPFWP+GTG+ARGFLAA D+AWMV+ W
Sbjct: 364 FDFTSMMRAESSARVQEKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRW 423
Query: 429 SLGTSPLEVLAERESIYRLLPQTTPENVSKNFSQYSIDPVTRYPNINVNFLRPSQVRHLY 488
+ G LEVLAERES+Y+LL QT+PEN+ +N +QY +DP TRYPN+N+ + P+QVR LY
Sbjct: 424 AEGAESLEVLAERESLYQLLSQTSPENMHRNVAQYGLDPATRYPNLNLRAVTPNQVRDLY 483
Query: 489 DTGETKDIHLEMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWK 548
D + + N +T + S +LL WCQ QT GY GV+V+DL+ SW
Sbjct: 484 DVLAKEPVQRN-----NDKTDTGMPATGSAGTQEELLRWCQEQTAGYPGVHVSDLSSSWA 538
Query: 549 SGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPD 608
GLALCA+++R +P L++ L + A +AE ELGI+P+++ + A V D
Sbjct: 539 DGLALCALVYRLQPGLLEPSELQGLGALEATAWALKVAENELGITPVVSAQ--AVVAGSD 596
Query: 609 KLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIASTRSPISFLSKLGQTISRKRSPK 668
L ++ YL+ F+ FK S + + T S + FLSKL +T+ R R+
Sbjct: 597 PLGLIAYLSHFHSAFKSMAHSPGPVSQAS-------PGTSSAVLFLSKLQRTLQRSRA-- 647
Query: 669 DKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVSTLTDRRMDVAVGNQNKVKYMATQ 728
KE D GK+ + E + P + T
Sbjct: 648 --KENAEDAGGKKLRLEMEAETPSTEVPPDPEPGVPLT---------------------- 683
Query: 729 LLAKFEENAPAQSIGIRRQGSMKKEFPQNLGGSDTCYFCQKRVYVMERLSAEGKFFHRSC 788
P+Q Q G D C C + +YV+ERL G FFHRSC
Sbjct: 684 --------PPSQH--------------QEAGAGDLCALCGEHLYVLERLCVNGHFFHRSC 721
Query: 789 FKCEYCATTLRLSAYAYDIEDGKFYCKPHYCYRLSGYAQRKRPAVAPLSGKEAKGPLQDG 848
F+C C TL Y DG FYC H Q A G E+ +
Sbjct: 722 FRCHTCEATLWPGGYEQHPGDGHFYCLQH-------LPQTDHKAEGSDRGPES----PEL 770
Query: 849 ATTDANGRANAVASSTERTPGSG-VNGLEEPSIAKRLRGTPERIELENYRLS 899
T N +++ T G+G V +P+ + +PER L + L+
Sbjct: 771 PTPSENSMPPGLSTPTASQEGAGPVPDPSQPTRRQIRLSSPERQRLSSLNLT 822
>gi|226530313 microtubule associated monoxygenase, calponin and LIM
domain containing 1 isoform 2 [Homo sapiens]
Length = 981
Score = 388 bits (996), Expect = e-107
Identities = 191/306 (62%), Positives = 231/306 (75%), Gaps = 5/306 (1%)
Query: 10 NPAHVLFDRFVQATTCKGTLKAFQELCDHLELKPKDYRSFYHKLKSKLNYWKAKALWAKL 69
NPAH F+ F+QA C+ L +FQELC L L+P YHK+K +LNYW AK+LW KL
Sbjct: 8 NPAHAHFESFLQAQLCQDVLSSFQELCGALGLEPGGGLPQYHKIKDQLNYWSAKSLWTKL 67
Query: 70 DKRGSHKDYKKGKACTNTKCLIIGAGPCGLRTAIDLSLLGAKVVVIEKRDAFSRNNVLHL 129
DKR Y++G+ACT+TKCL++GAGPCGLR A++L+LLGA+VV++EKR FSR+NVLHL
Sbjct: 68 DKRAGQPVYQQGRACTSTKCLVVGAGPCGLRVAVELALLGARVVLVEKRTKFSRHNVLHL 127
Query: 130 WPFTIHDLRGLGAKKFYGKFCAGAIDHISIRQLQLILLKVALILGIEIHVNVEFQGLIQP 189
WPFTIHDLR LGAKKFYG+FC G +DHISIRQLQL+LLKVAL+LG+EIH V F GL P
Sbjct: 128 WPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVTFTGLQPP 187
Query: 190 PEDQENERIGWRALVHPK-THPVSEYEFEVIIGGDGRRNTLEGFRRKEFRGKLAIAITAN 248
P + GWRA + P ++ YEF+V+I G + EGF+ +E RGKLAI ITAN
Sbjct: 188 P----RKGSGWRAQLQPNPPAQLANYEFDVLISAAGGKFVPEGFKVREMRGKLAIGITAN 243
Query: 249 FINRNTTAEAKVEEISGVAFIFNQKFFQELREATGIDLENIVYYKDDTHYFVMTAKKQSL 308
F+N T E +V EISGVA I+NQ FFQ L +ATGIDLENIVYYKDDTHYFVMTAKKQ L
Sbjct: 244 FVNGRTVEETQVPEISGVARIYNQSFFQSLLKATGIDLENIVYYKDDTHYFVMTAKKQCL 303
Query: 309 LDKGVI 314
L GV+
Sbjct: 304 LRLGVL 309
Score = 266 bits (681), Expect = 5e-71
Identities = 169/501 (33%), Positives = 238/501 (47%), Gaps = 74/501 (14%)
Query: 400 LLEPFWPMGTGIARGFLAAMDSAWMVRSWSLGTSPLEVLAERESIYRLLPQTTPENVSKN 459
L +PFWP+GTG+ARGFLAA D+AWMV+ W+ G LEVLAERES+Y+LL QT+PEN+ +N
Sbjct: 309 LRQPFWPLGTGVARGFLAAFDAAWMVKRWAEGAESLEVLAERESLYQLLSQTSPENMHRN 368
Query: 460 FSQYSIDPVTRYPNINVNFLRPSQVRHLYDTGETKDIHLEMESLVNSRTTPKLTRNESVA 519
+QY +DP TRYPN+N+ + P+QVR LYD + + N +T + S
Sbjct: 369 VAQYGLDPATRYPNLNLRAVTPNQVRDLYDVLAKEPVQRN-----NDKTDTGMPATGSAG 423
Query: 520 RSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNN 579
+LL WCQ QT GY GV+V+DL+ SW GLALCA+++R +P L++ L +
Sbjct: 424 TQEELLRWCQEQTAGYPGVHVSDLSSSWADGLALCALVYRLQPGLLEPSELQGLGALEAT 483
Query: 580 QLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEE 639
A +AE ELGI+P+++ + A V D L ++ YL+ F+ FK S + +
Sbjct: 484 AWALKVAENELGITPVVSAQ--AVVAGSDPLGLIAYLSHFHSAFKSMAHSPGPVSQAS-- 539
Query: 640 KAVLIASTRSPISFLSKLGQTISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGE 699
T S + FLSKL +T+ R R+ KE D GK+ + E +
Sbjct: 540 -----PGTSSAVLFLSKLQRTLQRSRA----KENAEDAGGKKLRLEMEAETPSTEVPPDP 590
Query: 700 RPTLVSTLTDRRMDVAVGNQNKVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLG 759
P + T P+Q Q G
Sbjct: 591 EPGVPLT------------------------------PPSQH--------------QEAG 606
Query: 760 GSDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYC 819
D C C + +YV+ERL G FFHRSCF+C C TL Y DG FYC H
Sbjct: 607 AGDLCALCGEHLYVLERLCVNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQH-- 664
Query: 820 YRLSGYAQRKRPAVAPLSGKEAKGPLQDGATTDANGRANAVASSTERTPGSG-VNGLEEP 878
Q A G E+ + T N +++ T G+G V +P
Sbjct: 665 -----LPQTDHKAEGSDRGPES----PELPTPSENSMPPGLSTPTASQEGAGPVPDPSQP 715
Query: 879 SIAKRLRGTPERIELENYRLS 899
+ + +PER L + L+
Sbjct: 716 TRRQIRLSSPERQRLSSLNLT 736
>gi|33667117 MICAL-like 2 isoform 1 [Homo sapiens]
Length = 904
Score = 147 bits (372), Expect = 4e-35
Identities = 91/294 (30%), Positives = 144/294 (48%), Gaps = 65/294 (22%)
Query: 527 WCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAFDIA 586
WC++Q +GY VN+ ++T S++ GLA CAI+HR+RPDLI+F +L ++N+ +NN+LAF +A
Sbjct: 10 WCRQQCEGYRDVNICNMTTSFRDGLAFCAILHRHRPDLINFSALKKENIYENNKLAFRVA 69
Query: 587 EKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKDSLPSSDTLDLNAEEKAVLIAS 646
E+ LGI ++ ++M ++ PD+LS++ Y++Q+Y F
Sbjct: 70 EEHLGIPALLDAEDMVALKVPDRLSILTYVSQYYNYFHG--------------------- 108
Query: 647 TRSPISFLSKLGQTISRKRSPKDKKEKDLDGAGKRRKTSQSEEEEAPRGHRGERPTLVST 706
RSPI + AG +R + SEEE + + + L S
Sbjct: 109 -RSPIGGM-----------------------AGVKRASEDSEEEPSGKKAPVQAAKLPSP 144
Query: 707 LTDRRMDVAVGNQNKVKYMATQLLAKFEENAPAQSIGIRRQGSMKKEFPQNLGG---SDT 763
R+ ++ N V + + E A G + Q L G S T
Sbjct: 145 APARKPPLSPAQTNPV-------VQRRNEGA----------GGPPPKTDQALAGSLVSST 187
Query: 764 CYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPH 817
C C K V++++R A+G+ +HRSCF+C+ C+ TL AY E G F C H
Sbjct: 188 CGVCGKHVHLVQRHLADGRLYHRSCFRCKQCSCTLHSGAYKATGEPGTFVCTSH 241
>gi|31324577 molecule interacting with Rab13 [Homo sapiens]
Length = 863
Score = 123 bits (309), Expect = 7e-28
Identities = 54/100 (54%), Positives = 77/100 (77%)
Query: 524 LLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAF 583
LL WC+RQ +GY GV + DL+ S++ GLA CAI+HR+RPDL+DFDSL + NV +NN+LAF
Sbjct: 8 LLAWCRRQCEGYRGVEIRDLSSSFRDGLAFCAILHRHRPDLLDFDSLSKDNVFENNRLAF 67
Query: 584 DIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
++AEKELGI ++ +M S+ PD LS++ Y++Q+Y F
Sbjct: 68 EVAEKELGIPALLDPNDMVSMSVPDCLSIMTYVSQYYNHF 107
Score = 63.9 bits (154), Expect = 7e-10
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 761 SDTCYFCQKRVYVMERLSAEGKFFHRSCFKCEYCATTLRLSAYAYDIEDGKFYCKPHYCY 820
S TC CQ+ V++++R A+G+ +HR CF+C C++TL AY E+G F C H C
Sbjct: 161 SSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRCSSTLLPGAYENGPEEGTFVCAEH-CA 219
Query: 821 RLS-GYAQRKRPAVAPLSGKEAKGPLQDGATTDANGRANAVASSTERTPGSGVNGLEEPS 879
RL G RP ++ + L + A G ++ A + G + P
Sbjct: 220 RLGPGTRSGTRPGPFSQPKQQHQQQLAEDAKDVPGGGPSSSAPAGAEADGPKASPEARPQ 279
Query: 880 IAKRLR 885
I + R
Sbjct: 280 IPTKPR 285
>gi|67782321 spectrin beta isoform a [Homo sapiens]
Length = 2328
Score = 103 bits (258), Expect = 6e-22
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 513 TRNESVARSSK--LLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSL 570
T+ RS+K LL WCQ +T GY VNVT+ T SWK GLA A+IH++RPDLIDFD L
Sbjct: 166 TQEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKL 225
Query: 571 DEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
+ N N + AF++AE++LGI P++ +++ + PD+ S++ Y+ FY F
Sbjct: 226 KDSNARHNLEHAFNVAERQLGIIPLLDPEDVFT-ENPDEKSIITYVVAFYHYF 277
>gi|67782319 spectrin beta isoform b [Homo sapiens]
Length = 2137
Score = 103 bits (258), Expect = 6e-22
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 513 TRNESVARSSK--LLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSL 570
T+ RS+K LL WCQ +T GY VNVT+ T SWK GLA A+IH++RPDLIDFD L
Sbjct: 166 TQEGRETRSAKDALLLWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHKHRPDLIDFDKL 225
Query: 571 DEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
+ N N + AF++AE++LGI P++ +++ + PD+ S++ Y+ FY F
Sbjct: 226 KDSNARHNLEHAFNVAERQLGIIPLLDPEDVFT-ENPDEKSIITYVVAFYHYF 277
>gi|150378549 tangerin [Homo sapiens]
Length = 1523
Score = 101 bits (251), Expect = 4e-21
Identities = 53/120 (44%), Positives = 73/120 (60%), Gaps = 6/120 (5%)
Query: 499 EMESLVNSRTTPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIH 558
E L S+ P L V+ S LL WCQ T GY GV +T+ T SW++GLA CAI+H
Sbjct: 1023 EDRRLPGSQAPPAL-----VSSSQSLLEWCQEVTTGYRGVRITNFTTSWRNGLAFCAILH 1077
Query: 559 RYRPDLIDFDSLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQ 618
R+ PD ID+ SLD N+++NN+ AFD LG+S ++ +M + PDKL ++ YL Q
Sbjct: 1078 RFYPDKIDYASLDPLNIKQNNKQAFD-GFAALGVSRLLEPADMVLLSVPDKLIVMTYLCQ 1136
>gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
Length = 2390
Score = 100 bits (250), Expect = 5e-21
Identities = 47/108 (43%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQ +T GY VNV + T SW+ GLA AI+H++RPDL+DF+SL + N
Sbjct: 174 EKKSAKDALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDLLDFESLKKCNA 233
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N Q AF++AEKELG++ ++ +++ +V +PD+ S++ Y+ +Y F
Sbjct: 234 HYNLQNAFNLAEKELGLTKLLDPEDV-NVDQPDEKSIITYVATYYHYF 280
>gi|112382252 spectrin, beta, non-erythrocytic 1 isoform 2 [Homo
sapiens]
Length = 2155
Score = 98.2 bits (243), Expect = 3e-20
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQ +T GY VN+ + T SW+ G+A A+IH++RPDLIDFD L + N
Sbjct: 158 EKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNA 217
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N Q AF++AE+ LG++ ++ +++ SV PD+ S++ Y+ +Y F
Sbjct: 218 HYNLQNAFNLAEQHLGLTKLLDPEDI-SVDHPDEKSIITYVVTYYHYF 264
>gi|112382250 spectrin, beta, non-erythrocytic 1 isoform 1 [Homo
sapiens]
Length = 2364
Score = 98.2 bits (243), Expect = 3e-20
Identities = 45/108 (41%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQ +T GY VN+ + T SW+ G+A A+IH++RPDLIDFD L + N
Sbjct: 171 EKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNA 230
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N Q AF++AE+ LG++ ++ +++ SV PD+ S++ Y+ +Y F
Sbjct: 231 HYNLQNAFNLAEQHLGLTKLLDPEDI-SVDHPDEKSIITYVVTYYHYF 277
>gi|217330574 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 97.1 bits (240), Expect = 7e-20
Identities = 47/115 (40%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Query: 509 TPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFD 568
+P L R + ++S LL WC+ T Y GV +T+ T SW++GL+ CAI+H +RPDLID+
Sbjct: 401 SPVLGRKPNASQS--LLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYK 458
Query: 569 SLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
SL+ Q++++NN+ A+D +GIS ++ +M + PDKL+++ YL Q F
Sbjct: 459 SLNPQDIKENNKKAYD-GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHF 512
>gi|217330572 EH domain binding protein 1 isoform 3 [Homo sapiens]
Length = 1160
Score = 97.1 bits (240), Expect = 7e-20
Identities = 47/115 (40%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Query: 509 TPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFD 568
+P L R + ++S LL WC+ T Y GV +T+ T SW++GL+ CAI+H +RPDLID+
Sbjct: 401 SPVLGRKPNASQS--LLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYK 458
Query: 569 SLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
SL+ Q++++NN+ A+D +GIS ++ +M + PDKL+++ YL Q F
Sbjct: 459 SLNPQDIKENNKKAYD-GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHF 512
>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
Length = 1196
Score = 97.1 bits (240), Expect = 7e-20
Identities = 47/115 (40%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Query: 509 TPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFD 568
+P L R + ++S LL WC+ T Y GV +T+ T SW++GL+ CAI+H +RPDLID+
Sbjct: 401 SPVLGRKPNASQS--LLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYK 458
Query: 569 SLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
SL+ Q++++NN+ A+D +GIS ++ +M + PDKL+++ YL Q F
Sbjct: 459 SLNPQDIKENNKKAYD-GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHF 512
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 97.1 bits (240), Expect = 7e-20
Identities = 47/115 (40%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Query: 509 TPKLTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFD 568
+P L R + ++S LL WC+ T Y GV +T+ T SW++GL+ CAI+H +RPDLID+
Sbjct: 436 SPVLGRKPNASQS--LLVWCKEVTKNYRGVKITNFTTSWRNGLSFCAILHHFRPDLIDYK 493
Query: 569 SLDEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
SL+ Q++++NN+ A+D +GIS ++ +M + PDKL+++ YL Q F
Sbjct: 494 SLNPQDIKENNKKAYD-GFASIGISRLLEPSDMVLLAIPDKLTVMTYLYQIRAHF 547
>gi|4501893 actinin, alpha 2 [Homo sapiens]
Length = 894
Score = 96.7 bits (239), Expect = 9e-20
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 15/190 (7%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQR+T Y VN+ + SWK GL LCA+IHR+RPDLID+ L++ +
Sbjct: 149 EETSAKEGLLLWCQRKTAPYRNVNIQNFHTSWKDGLGLCALIHRHRPDLIDYSKLNKDDP 208
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFKDSLPSS----- 630
N LA +IAEK L I ++ +++ + +PD+ +++ Y++ FY F + +
Sbjct: 209 IGNINLAMEIAEKHLDIPKMLDAEDIVNTPKPDERAIMTYVSCFYHAFAGAEQAETAANR 268
Query: 631 --DTLDLNAEEKAVLIASTRSPISFLSKLGQTIS--RKRSPK------DKKEKDLDGAGK 680
L +N E + ++ R L + +TI R+P+ KK +D +
Sbjct: 269 ICKVLAVNQENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRR 328
Query: 681 RRKTSQSEEE 690
+ K + +E+
Sbjct: 329 KHKPPKVQEK 338
>gi|4557241 actinin, alpha 3 [Homo sapiens]
Length = 901
Score = 95.5 bits (236), Expect = 2e-19
Identities = 45/108 (41%), Positives = 68/108 (62%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQR+T Y VNV + SWK GLALCA+IHR+RPDLID+ L + +
Sbjct: 156 EETSAKEGLLLWCQRKTAPYRNVNVQNFHTSWKDGLALCALIHRHRPDLIDYAKLRKDDP 215
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N AF++AEK L I ++ +++ + +PD+ +++ Y++ FY F
Sbjct: 216 IGNLNTAFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHAF 263
>gi|194097352 actinin, alpha 1 isoform c [Homo sapiens]
Length = 887
Score = 94.7 bits (234), Expect = 4e-19
Identities = 42/108 (38%), Positives = 65/108 (60%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQR+T Y VN+ + +SWK GL CA+IHR+RP+LID+ L + +
Sbjct: 142 EETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDP 201
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N AFD+AEK L I ++ +++ PD+ +++ Y++ FY F
Sbjct: 202 LTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAF 249
>gi|194097350 actinin, alpha 1 isoform a [Homo sapiens]
Length = 914
Score = 94.7 bits (234), Expect = 4e-19
Identities = 42/108 (38%), Positives = 65/108 (60%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQR+T Y VN+ + +SWK GL CA+IHR+RP+LID+ L + +
Sbjct: 142 EETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDP 201
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N AFD+AEK L I ++ +++ PD+ +++ Y++ FY F
Sbjct: 202 LTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAF 249
>gi|4501891 actinin, alpha 1 isoform b [Homo sapiens]
Length = 892
Score = 94.7 bits (234), Expect = 4e-19
Identities = 42/108 (38%), Positives = 65/108 (60%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQR+T Y VN+ + +SWK GL CA+IHR+RP+LID+ L + +
Sbjct: 142 EETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDP 201
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N AFD+AEK L I ++ +++ PD+ +++ Y++ FY F
Sbjct: 202 LTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMTYVSSFYHAF 249
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1
[Homo sapiens]
Length = 2564
Score = 94.4 bits (233), Expect = 5e-19
Identities = 47/113 (41%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 513 TRNESVARSSK--LLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSL 570
T + RS+K LL WCQ +T GY VN+ + T SW+ GLA A+IHR+RPDL+DF L
Sbjct: 173 TEDNRETRSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKL 232
Query: 571 DEQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
+ N N Q AF AE+ LG++ ++ +++ ++ PD+ S++ Y+ FY F
Sbjct: 233 TKSNANYNLQRAFRTAEQHLGLARLLDPEDV-NMEAPDEKSIITYVVSFYHYF 284
>gi|12025678 actinin, alpha 4 [Homo sapiens]
Length = 911
Score = 91.7 bits (226), Expect = 3e-18
Identities = 42/108 (38%), Positives = 67/108 (62%)
Query: 516 ESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNV 575
E + LL WCQR+T Y VNV + +SWK GLA A+IHR+RP+LI++D L + +
Sbjct: 161 EETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDP 220
Query: 576 EKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMF 623
N AF++AEK L I ++ +++ + PD+ +++ Y++ FY F
Sbjct: 221 VTNLNNAFEVAEKYLDIPKMLDAEDIVNTARPDEKAIMTYVSSFYHAF 268
>gi|75750474 spectrin domain with coiled-coils 1 NSP5a3b [Homo
sapiens]
Length = 987
Score = 91.3 bits (225), Expect = 4e-18
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 512 LTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLD 571
L R ++ + LL WCQ++T GYA +++T+ + SW GLA CA++H Y P I + L+
Sbjct: 875 LAREYGGSKRNALLKWCQKKTQGYANIDITNFSSSWSDGLAFCALLHTYLPAHIPYQELN 934
Query: 572 EQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFK 624
Q ++N LAF+ AE +GI P + EM PD S++ Y+ Q Y+ F+
Sbjct: 935 SQEKKRNLLLAFEAAE-SVGIKPSLELSEMLYTDRPDWQSVMQYVAQIYKYFE 986
>gi|75750472 spectrin domain with coiled-coils 1 NSP5b3b [Homo
sapiens]
Length = 1068
Score = 91.3 bits (225), Expect = 4e-18
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 512 LTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLD 571
L R ++ + LL WCQ++T GYA +++T+ + SW GLA CA++H Y P I + L+
Sbjct: 956 LAREYGGSKRNALLKWCQKKTQGYANIDITNFSSSWSDGLAFCALLHTYLPAHIPYQELN 1015
Query: 572 EQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFK 624
Q ++N LAF+ AE +GI P + EM PD S++ Y+ Q Y+ F+
Sbjct: 1016 SQEKKRNLLLAFEAAE-SVGIKPSLELSEMLYTDRPDWQSVMQYVAQIYKYFE 1067
>gi|170016061 spectrin, beta, non-erythrocytic 5 [Homo sapiens]
Length = 3639
Score = 87.8 bits (216), Expect = 4e-17
Identities = 41/97 (42%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 524 LLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLDEQNVEKNNQLAF 583
LL WCQR+T Y VN+TD + SW GL A+IH +RPDL+D+ SL N AF
Sbjct: 148 LLVWCQRKTASYTNVNITDFSRSWSDGLGFNALIHAHRPDLLDYGSLRPDRPLHNLAFAF 207
Query: 584 DIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFY 620
+AE+ELGI+ ++ +++A+ +PD+ S++ Y++ +Y
Sbjct: 208 LVAEQELGIAQLLDPEDVAA-AQPDERSIMTYVSLYY 243
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 87.0 bits (214), Expect = 8e-17
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 512 LTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLD 571
L R ++ + LL WCQ++T+GY +++T+ + SW GLA CA++H Y P I + L+
Sbjct: 1005 LAREYGGSKRNALLKWCQKKTEGYQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELN 1064
Query: 572 EQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFK 624
Q+ +N LAF AE +GI + EM PD ++++Y+T Y+ F+
Sbjct: 1065 SQDKRRNFMLAFQAAE-SVGIKSTLDINEMVRTERPDWQNVMLYVTAIYKYFE 1116
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 87.0 bits (214), Expect = 8e-17
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 512 LTRNESVARSSKLLGWCQRQTDGYAGVNVTDLTMSWKSGLALCAIIHRYRPDLIDFDSLD 571
L R ++ + LL WCQ++T+GY +++T+ + SW GLA CA++H Y P I + L+
Sbjct: 1005 LAREYGGSKRNALLKWCQKKTEGYQNIDITNFSSSWNDGLAFCALLHTYLPAHIPYQELN 1064
Query: 572 EQNVEKNNQLAFDIAEKELGISPIMTGKEMASVGEPDKLSMVMYLTQFYEMFK 624
Q+ +N LAF AE +GI + EM PD ++++Y+T Y+ F+
Sbjct: 1065 SQDKRRNFMLAFQAAE-SVGIKSTLDINEMVRTERPDWQNVMLYVTAIYKYFE 1116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,558,111
Number of Sequences: 37866
Number of extensions: 1657090
Number of successful extensions: 5528
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 5233
Number of HSP's gapped (non-prelim): 328
length of query: 966
length of database: 18,247,518
effective HSP length: 112
effective length of query: 854
effective length of database: 14,006,526
effective search space: 11961573204
effective search space used: 11961573204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.