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Search of human proteins with 169214978
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169214978 PREDICTED: hypothetical protein [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214978 PREDICTED: hypothetical protein [Homo sapiens] 405 e-113
gi|169214665 PREDICTED: hypothetical protein [Homo sapiens] 405 e-113
gi|169214758 PREDICTED: hypothetical protein [Homo sapiens] 401 e-112
gi|169207782 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|169207076 PREDICTED: hypothetical protein [Homo sapiens] 39 0.002
gi|239748281 PREDICTED: hypothetical protein [Homo sapiens] 37 0.008
gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo ... 37 0.008
gi|4505835 polycystin 2 [Homo sapiens] 36 0.025
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 35 0.032
gi|21735552 mitogen-activated protein kinase kinase kinase 12 [H... 35 0.055
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 35 0.055
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 35 0.055
gi|169213640 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens] 33 0.21
gi|222831660 family with sequence similarity 171, member A2 [Hom... 32 0.27
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] 32 0.27
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] 32 0.27
gi|239746532 PREDICTED: ankyrin repeat domain 60 [Homo sapiens] 32 0.27
gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens] 32 0.27
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 32 0.47
gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] 32 0.47
gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 31 0.61
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 31 0.61
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] 31 0.61
gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 31 0.61
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 31 0.61
>gi|169214978 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 405 bits (1041), Expect = e-113
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG
Sbjct: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
Query: 61 ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR
Sbjct: 61 ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
Query: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR
Sbjct: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
Query: 181 VRLMPCSGRLANGRALGSG 199
VRLMPCSGRLANGRALGSG
Sbjct: 181 VRLMPCSGRLANGRALGSG 199
>gi|169214665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 405 bits (1041), Expect = e-113
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG
Sbjct: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
Query: 61 ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR
Sbjct: 61 ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
Query: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR
Sbjct: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
Query: 181 VRLMPCSGRLANGRALGSG 199
VRLMPCSGRLANGRALGSG
Sbjct: 181 VRLMPCSGRLANGRALGSG 199
>gi|169214758 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 401 bits (1031), Expect = e-112
Identities = 197/199 (98%), Positives = 198/199 (99%)
Query: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG
Sbjct: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSG 60
Query: 61 ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQR 120
ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGW+LQR
Sbjct: 61 ERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWELQR 120
Query: 121 RSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
RSARGSGAQELGVNLS SGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR
Sbjct: 121 RSARGSGAQELGVNLSFSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGSR 180
Query: 181 VRLMPCSGRLANGRALGSG 199
VRLMPCSGRLANGRALGSG
Sbjct: 181 VRLMPCSGRLANGRALGSG 199
>gi|169207782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 14/183 (7%)
Query: 2 GAPGTPRLSRFGGSRGALGGSVSLP----GCTKCPLPRSLDGKRRGRRTSHASACDPCLK 57
G P SR GGSRG +LP G P R R GR + C P +
Sbjct: 83 GNSSDPATSRLGGSRGP---HPTLPPGPAGSLVFPERRGSLQDRLGR--ASRPGCPPSPR 137
Query: 58 QSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK 117
S + R A R G A+ + + R PG G A +
Sbjct: 138 GSRQERGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQ 197
Query: 118 LQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVD---PGPPPHDRA 174
RR G A LG +G+ G +++G R + +G W R V PG PH+RA
Sbjct: 198 PGRRPGLGRAASPLGPR--GAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERA 255
Query: 175 AAS 177
A+
Sbjct: 256 GAA 258
>gi|169207076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 330
Score = 39.3 bits (90), Expect = 0.002
Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 14/183 (7%)
Query: 2 GAPGTPRLSRFGGSRGALGGSVSLP----GCTKCPLPRSLDGKRRGRRTSHASACDPCLK 57
G P SR GGSRG +LP G P R R GR + C P +
Sbjct: 83 GNSSDPATSRLGGSRGP---HPTLPPGPAGSLVFPERRGSLQDRLGR--ASRPGCPPSPR 137
Query: 58 QSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK 117
S + R A R G A+ + + R PG G A +
Sbjct: 138 GSRQERGANSPGRSGARGCGGAAALQQEPTNFRGRPRPGARGTDPPGRTLPAPLARPSTQ 197
Query: 118 LQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVD---PGPPPHDRA 174
RR G A LG +G+ G +++G R + +G W R V PG PH+RA
Sbjct: 198 PGRRPGLGRAASPLGPR--GAGVTGAGPATQGGRDRGRWGRWVRRRVPCPLPGLRPHERA 255
Query: 175 AAS 177
A+
Sbjct: 256 GAA 258
>gi|239748281 PREDICTED: hypothetical protein [Homo sapiens]
Length = 242
Score = 37.4 bits (85), Expect = 0.008
Identities = 55/195 (28%), Positives = 69/195 (35%), Gaps = 43/195 (22%)
Query: 2 GAPGTP-RLSRFGGSRGALGGSV-SLPGCTKCPLPRSL-----------DGKRRGRRTSH 48
GAP TP S G G G V + P PL R + KRR RR
Sbjct: 50 GAPSTPWDTSGAPGPAGISPGVVRTAPSLADHPLGRQARRAGRAGPEVEEVKRRARRLLQ 109
Query: 49 ASACDPCLKQSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRL 108
A DP S R+ + G P R R ++ +GG G R
Sbjct: 110 EPARDP-------------SILRLPRVVGVPGPRGRRHRGEQQQQREQRGG-----GAR- 150
Query: 109 VTGAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGP 168
G G G + Q A G +++G GL + +RG +A V P P
Sbjct: 151 APGPGPGSR-QPLPAGLHGRRKVGSAPDRHGLGAGSAGARG----------NKAVVGPSP 199
Query: 169 PPHDRAAASGSRVRL 183
PP R SGS RL
Sbjct: 200 PPPGRRLHSGSESRL 214
>gi|239742182 PREDICTED: hypothetical protein XP_002342446 [Homo
sapiens]
Length = 242
Score = 37.4 bits (85), Expect = 0.008
Identities = 55/195 (28%), Positives = 69/195 (35%), Gaps = 43/195 (22%)
Query: 2 GAPGTP-RLSRFGGSRGALGGSV-SLPGCTKCPLPRSL-----------DGKRRGRRTSH 48
GAP TP S G G G V + P PL R + KRR RR
Sbjct: 50 GAPSTPWDTSGAPGPAGISPGVVRTAPSLADHPLGRQARRAGRAGPEVEEVKRRARRLLQ 109
Query: 49 ASACDPCLKQSGERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRL 108
A DP S R+ + G P R R ++ +GG G R
Sbjct: 110 EPARDP-------------SILRLPRVVGVPGPRGRRHRGEQQQQREQRGG-----GAR- 150
Query: 109 VTGAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGP 168
G G G + Q A G +++G GL + +RG +A V P P
Sbjct: 151 APGPGPGSR-QPLPAGLHGRRKVGSAPDRHGLGAGSAGARG----------NKAVVGPSP 199
Query: 169 PPHDRAAASGSRVRL 183
PP R SGS RL
Sbjct: 200 PPPGRRLHSGSESRL 214
>gi|4505835 polycystin 2 [Homo sapiens]
Length = 968
Score = 35.8 bits (81), Expect = 0.025
Identities = 51/183 (27%), Positives = 68/183 (37%), Gaps = 43/183 (23%)
Query: 32 PLPRSLDGKRRGRRTSHASACDPCLKQSG---ERRSAKVSFRRVLTLAG--PPASRARLF 86
P PR+ D GR + +A L G E+R ++ +R+ A PPA A
Sbjct: 19 PAPRAPDP---GRLMAGCAAVGASLAAPGGLCEQRGLEIEMQRIRQAAARDPPAGAA--- 72
Query: 87 ADPRRPVE-----------PGKGGESDSLGVR-----LVTGAGVGWKL-QRRSARGSGAQ 129
A P P+ PG E + V +V V W+ RRSA
Sbjct: 73 ASPSPPLSSCSRQAWSRDNPGFEAEEEEEEVEGEEGGMVVEMDVEWRPGSRRSA------ 126
Query: 130 ELGVNLSSSGLASVGGSSRGCRAQRGFG---GWRRAAVDPGPPPHDRAAASGSRVRLMPC 186
+SS ++SVG SRG G G G RR D GPP R +P
Sbjct: 127 ------ASSAVSSVGARSRGLGGYHGAGHPSGRRRRREDQGPPCPSPVGGGDPLHRHLPL 180
Query: 187 SGR 189
G+
Sbjct: 181 EGQ 183
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 35.4 bits (80), Expect = 0.032
Identities = 28/97 (28%), Positives = 32/97 (32%), Gaps = 21/97 (21%)
Query: 79 PASRARLFADPR----RPVEPGKGGESDSLGVRLVTGAGVGW-----------KLQRRSA 123
P R R A P R PG GG + G G GW LQ +
Sbjct: 242 PRDRGRTQASPEKLENRSEAPGSGGRGGA------AGGGGGWTSRAPSPQAGRSLQEGAE 295
Query: 124 RGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWR 160
G G E L + GG C A G GG+R
Sbjct: 296 GGQGCSEAWATLGWAAAGGFGGGGGACTAGGGGGGYR 332
>gi|21735552 mitogen-activated protein kinase kinase kinase 12 [Homo
sapiens]
Length = 859
Score = 34.7 bits (78), Expect = 0.055
Identities = 49/160 (30%), Positives = 55/160 (34%), Gaps = 45/160 (28%)
Query: 18 ALGGSVSLPGCTKCPLP--RSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRVLTL 75
AL G V LPGC K P RS GK R R+ S +C
Sbjct: 521 ALSG-VGLPGCPKAPPSPGRSRRGKTRHRKASAKGSCGDL-------------------- 559
Query: 76 AGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELGVNL 135
P R + P EPG G LG G W+ + RG L +
Sbjct: 560 ---PGLRTAV-----PPHEPGGPGSPGGLG-----GGPSAWEACPPALRGLHHDLLLRKM 606
Query: 136 SSSG--LASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDR 173
SSS L S SRG A G G DPG PP R
Sbjct: 607 SSSSPDLLSAALGSRGRGATGGAG-------DPGSPPPAR 639
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 34.7 bits (78), Expect = 0.055
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 60 GERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVR-LVTGAGVGWKL 118
G+RR+ RR AG A + R+F+ P +P + G GG S GV LV V +
Sbjct: 95 GKRRAGGRQKRRRGPRAGQEAEKRRVFSLP-QPQQDGGGGASSGGGVTPLVEYEDVSSQS 153
Query: 119 QRRSARGSGAQELGVNLSSSGLASVGGS--SRGCRAQRGFGGWRRAAVDPGPPPHDRAAA 176
++ G GA ++ G GGS S +RG G RR P DR ++
Sbjct: 154 EQGLLLG-GASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERR-------PRRDRRSS 205
Query: 177 SG 178
SG
Sbjct: 206 SG 207
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 34.7 bits (78), Expect = 0.055
Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 60 GERRSAKVSFRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVR-LVTGAGVGWKL 118
G+RR+ RR AG A + R+F+ P +P + G GG S GV LV V +
Sbjct: 95 GKRRAGGRQKRRRGPRAGQEAEKRRVFSLP-QPQQDGGGGASSGGGVTPLVEYEDVSSQS 153
Query: 119 QRRSARGSGAQELGVNLSSSGLASVGGS--SRGCRAQRGFGGWRRAAVDPGPPPHDRAAA 176
++ G GA ++ G GGS S +RG G RR P DR ++
Sbjct: 154 EQGLLLG-GASAATAATAAGGTGGSGGSPASSSGTQRRGEGSERR-------PRRDRRSS 205
Query: 177 SG 178
SG
Sbjct: 206 SG 207
>gi|169213640 PREDICTED: hypothetical protein [Homo sapiens]
Length = 160
Score = 33.5 bits (75), Expect = 0.12
Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 117 KLQRRSARGSGAQE---LGVNLSSSGLASVGGSSRGCRA--QRGFGGWRRAAVDPG---- 167
K QRR R QE L +L L S GS RA ++G W R+ +PG
Sbjct: 29 KSQRRQCRRKTGQESRLLPADLCQDLLCSDCGSGCSLRAHPRQGTLAWPRSPPEPGKLGS 88
Query: 168 ----PPPHDRA--AASGSRVRLMPCSGRLANGRALGSG 199
P P + A A G V PCS R N A G G
Sbjct: 89 PRAKPDPWEGASRAEPGPGVAARPCSPRGGNWMAAGCG 126
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.5 bits (75), Expect = 0.12
Identities = 50/175 (28%), Positives = 58/175 (33%), Gaps = 39/175 (22%)
Query: 13 GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRV 72
G RGA VS + PL L G R TS V
Sbjct: 58 GNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTS------------------------V 93
Query: 73 LTLAGPPASRARLFADPRRP-VEPGKGGESDSLGVRLVTGAGVGWKLQ--RRSARGSGAQ 129
L LA P PRRP G G S V + G +L+ R + RGSG +
Sbjct: 94 LRLASPAGDL------PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGAVRGSGKR 147
Query: 130 E---LGVNLSSSGLASVGGSSRGCRAQRGFGGW---RRAAVDPGPPPHDRAAASG 178
L S LA +G G A RG+GG R PG P H G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG 202
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 33.1 bits (74), Expect = 0.16
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 74 TLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK---------LQRRSAR 124
TL+G P S + L + V+PG GGE R AG G + Q R+ R
Sbjct: 3 TLSGRPFSSSSLSRETIG-VQPGWGGEEVQGLARAGLAAGKGQRPPGPGRVRAAQARARR 61
Query: 125 GSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGS 179
G GA+E + A+ GG+ G AQ RA P AA +GS
Sbjct: 62 GGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQT-PQLRREAACAGS 115
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.1 bits (74), Expect = 0.16
Identities = 50/175 (28%), Positives = 58/175 (33%), Gaps = 39/175 (22%)
Query: 13 GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRV 72
G RGA VS + PL L G R TS V
Sbjct: 58 GNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTS------------------------V 93
Query: 73 LTLAGPPASRARLFADPRRP-VEPGKGGESDSLGVRLVTGAGVGWKLQ--RRSARGSGAQ 129
L LA P PRRP G G S V + G +L+ R + RGSG +
Sbjct: 94 LRLASPAGDL------PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKR 147
Query: 130 E---LGVNLSSSGLASVGGSSRGCRAQRGFGGW---RRAAVDPGPPPHDRAAASG 178
L S LA +G G A RG+GG R PG P H G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG 202
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 33.1 bits (74), Expect = 0.16
Identities = 50/175 (28%), Positives = 58/175 (33%), Gaps = 39/175 (22%)
Query: 13 GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRV 72
G RGA VS + PL L G R TS V
Sbjct: 58 GNLRGAPTAPVSFSRIRRNPLRTQLSGSPPRRPTS------------------------V 93
Query: 73 LTLAGPPASRARLFADPRRP-VEPGKGGESDSLGVRLVTGAGVGWKLQ--RRSARGSGAQ 129
L LA P PRRP G G S V + G +L+ R + RGSG +
Sbjct: 94 LRLASPAGDL------PRRPRPRAGGGRHSPRPAVGTIFRGGRKGRLREGRGALRGSGKR 147
Query: 130 E---LGVNLSSSGLASVGGSSRGCRAQRGFGGW---RRAAVDPGPPPHDRAAASG 178
L S LA +G G A RG+GG R PG P H G
Sbjct: 148 RGWGLRPQRVRSRLAGLGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGG 202
>gi|55743096 collagen, type XIV, alpha 1 [Homo sapiens]
Length = 1796
Score = 32.7 bits (73), Expect = 0.21
Identities = 45/178 (25%), Positives = 65/178 (36%), Gaps = 25/178 (14%)
Query: 1 MGAPGTPRLSRFGGSRGALGGSVSLPGCTKCPLPRSLDGKRRGR---RTSHASACDPCLK 57
+G PGTP + GS G G++ PG R G + + R+ C+ ++
Sbjct: 1571 IGIPGTPGVPGITGSMGP-QGALGPPGVPGAKGERGERGDLQSQAMVRSVARQVCEQLIQ 1629
Query: 58 QSGERRSAKVS-----FRRVLTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTG- 111
R +A ++ + T+ GPP +P RP PG GE G G
Sbjct: 1630 SHMARYTAILNQIPSHSSSIRTVQGPP-------GEPGRPGSPGAPGEQGPPGTPGFPGN 1682
Query: 112 AGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPP 169
AGV R G ++ + + G RG G G R PGPP
Sbjct: 1683 AGVPGTPGERGLTGIKGEKGNPGVGTQG-------PRGPPGPAGPSGESRPG-SPGPP 1732
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 32.3 bits (72), Expect = 0.27
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 78 PPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELGVNLSS 137
P +RA DP+RP PG G G G G GW R+A SG+ + V +
Sbjct: 570 PGPARAFPQPDPQRPQMPGHSGPGGEGG----GGGGEGWG-AGRAAPVSGSVTIPVLFNE 624
Query: 138 SGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRA 174
S +A + G + ++ ++ G PH RA
Sbjct: 625 STMAQLNGELQALTEKK--------LLELGVKPHPRA 653
>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 32.3 bits (72), Expect = 0.27
Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 73 LTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG 132
L AGPP R L RRP+ PG +S G+R T G AR GA+ +
Sbjct: 162 LPSAGPP--RPGLSVRRRRPLRPGAVRKSQPPGLRRQTAGG--------RARLGGARAVD 211
Query: 133 VNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPG----PPPH-DRAAASGSR 180
G C +RG RRAA PG P H RA AS SR
Sbjct: 212 --------PGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSR 256
>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 32.3 bits (72), Expect = 0.27
Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 73 LTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG 132
L AGPP R L RRP+ PG +S G+R T G AR GA+ +
Sbjct: 162 LPSAGPP--RPGLSVRRRRPLRPGAVRKSQPPGLRRQTAGG--------RARLGGARAVD 211
Query: 133 VNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPG----PPPH-DRAAASGSR 180
G C +RG RRAA PG P H RA AS SR
Sbjct: 212 --------PGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSR 256
>gi|239746532 PREDICTED: ankyrin repeat domain 60 [Homo sapiens]
Length = 345
Score = 32.3 bits (72), Expect = 0.27
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 113 GVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRA-QRGFGGWRRAAVDPGPPPH 171
G W ++R +A GA+ G +S L G G RA +G GG R + D P
Sbjct: 4 GRAWGMRRAAAGAGGARAAGPTGGASRLHPNAGRRSGARAGAQGCGGPRVGSADSRALPA 63
Query: 172 DRAAASGSRVRLMPCSGRLAN 192
A + R + + C + A+
Sbjct: 64 QPLACARGRSQRLVCDPKAAS 84
>gi|29648305 zinc finger, CCHC domain containing 3 [Homo sapiens]
Length = 403
Score = 32.3 bits (72), Expect = 0.27
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 13 GGSRGALGGSVSLPGCTKCPLPRSLDGKRRGRRTSHA-SACDPCLK----QSGERRSAKV 67
GG LGG L P + G +GRR A A DP K ++G R+ A+
Sbjct: 69 GGGSAGLGGPAGLAAPDLGDFPPAGRGDPKGRRRDPAGEAVDPRKKKGAAEAGRRKKAEA 128
Query: 68 SFRRVLTLAGP----PASRARLFADPRRPVEPGKG 98
+ + T A P A+ L +P PGKG
Sbjct: 129 AAAAMATPARPGEAEDAAERPLQDEPAAAAGPGKG 163
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 31.6 bits (70), Expect = 0.47
Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 74 TLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWK---------LQRRSAR 124
TL+G P S + L + V+PG GGE R G G + Q R+ R
Sbjct: 3 TLSGRPFSSSSLSRETIG-VQPGWGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARR 61
Query: 125 GSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPGPPPHDRAAASGS 179
G GA+E + A+ GG+ G AQ RA P AA +GS
Sbjct: 62 GGGARERPAEGARGPRAARGGARAGPDAQLRAARTHRARAQT-PQLRREAACAGS 115
>gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 31.6 bits (70), Expect = 0.47
Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
Query: 73 LTLAGPPASRARLFADPRRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG 132
L AGPP R L RRP+ PG +S G+R T G AR GA+ +
Sbjct: 162 LPSAGPP--RPGLSVRWRRPLRPGAVRKSQPPGLRRQTAGG--------RARLGGARAVD 211
Query: 133 VNLSSSGLASVGGSSRGCRAQRGFGGWRRAAVDPG----PPPH-DRAAASGSR 180
G C +RG RRAA PG P H RA AS SR
Sbjct: 212 --------PGTGWGHCACSRRRGERRSRRAAGVPGELGAPGGHCTRALASTSR 256
>gi|239754368 PREDICTED: hypothetical protein [Homo sapiens]
Length = 336
Score = 31.2 bits (69), Expect = 0.61
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 151 RAQRGFGGWRRAAVDPG----PPPHDRAAASGSRVRLMPCSGRLANGRALGSG 199
R Q GFG RAA G PP R SG R R P L +GR+ GSG
Sbjct: 191 RVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSG 243
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 31.2 bits (69), Expect = 0.61
Identities = 38/108 (35%), Positives = 43/108 (39%), Gaps = 28/108 (25%)
Query: 59 SGERRSAKVSFRRVLTLAGPPASRARLFADPRRP--------VEPGKGGESDSLGVRLVT 110
SGE RS RR PPA R A RR + KGG S G R
Sbjct: 104 SGEERSQPRRPRRP-----PPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDR--- 155
Query: 111 GAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGG 158
G GW + G A+ G SS+GL + GSSRG GF G
Sbjct: 156 -GGSGW------SHGHTARVGGTGDSSAGLTTFPGSSRG-----GFSG 191
>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 31.2 bits (69), Expect = 0.61
Identities = 53/198 (26%), Positives = 69/198 (34%), Gaps = 46/198 (23%)
Query: 37 LDGKRRGRRTSHASACDPCLKQSGERRSAKVSFRRVLTLAGPPASRARLFADP------- 89
L+ RRGRR P L+ G R+ + L G RA A+P
Sbjct: 12 LNFPRRGRRGERR----PGLRSEGRRKGLLAAEAGGAVLGG--GRRAGRRAEPPEPSYSR 65
Query: 90 -RRPVEPGKGGESDSLGVRLVTGAGVGWKLQRRSARGSGAQELG-----------VNLSS 137
RR GKGG S +LG A L+ + RGS + LG ++
Sbjct: 66 ERRETMEGKGGWSAALGSLPPPPAAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGG 125
Query: 138 SGLASVGGSSRGCRAQRGFGGW------RRAAVD----------PGPPPHDRAAASGSRV 181
+G + GG+ G R G R A D P PP A + R+
Sbjct: 126 AGRLAAGGAEAGERRSPNRGATSSLSPIARGAADVRPFSWVGGLPRPP-----APAALRL 180
Query: 182 RLMPCSGRLANGRALGSG 199
L P R A A G G
Sbjct: 181 LLPPAPRRRARSWACGPG 198
>gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo
sapiens]
Length = 336
Score = 31.2 bits (69), Expect = 0.61
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 151 RAQRGFGGWRRAAVDPG----PPPHDRAAASGSRVRLMPCSGRLANGRALGSG 199
R Q GFG RAA G PP R SG R R P L +GR+ GSG
Sbjct: 191 RVQGGFGREPRAAAGQGRGWLPPCRLRLQDSGPRRRPGPGPPALRSGRSRGSG 243
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 31.2 bits (69), Expect = 0.61
Identities = 38/108 (35%), Positives = 43/108 (39%), Gaps = 28/108 (25%)
Query: 59 SGERRSAKVSFRRVLTLAGPPASRARLFADPRRP--------VEPGKGGESDSLGVRLVT 110
SGE RS RR PPA R A RR + KGG S G R
Sbjct: 104 SGEERSQPRRPRRP-----PPAPRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDR--- 155
Query: 111 GAGVGWKLQRRSARGSGAQELGVNLSSSGLASVGGSSRGCRAQRGFGG 158
G GW + G A+ G SS+GL + GSSRG GF G
Sbjct: 156 -GGSGW------SHGHTARVGGTGDSSAGLTTFPGSSRG-----GFSG 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,497,123
Number of Sequences: 37866
Number of extensions: 490041
Number of successful extensions: 2376
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 2220
Number of HSP's gapped (non-prelim): 299
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.