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Search of human proteins with 169214874
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169214874 PREDICTED: hypothetical protein [Homo sapiens]
(583 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214874 PREDICTED: hypothetical protein [Homo sapiens] 1162 0.0
gi|169215109 PREDICTED: hypothetical protein [Homo sapiens] 1162 0.0
gi|169214604 PREDICTED: hypothetical protein [Homo sapiens] 1151 0.0
gi|239757495 PREDICTED: hypothetical protein [Homo sapiens] 50 6e-06
gi|239752012 PREDICTED: hypothetical protein XP_002348067 [Homo ... 50 6e-06
gi|239746497 PREDICTED: hypothetical protein XP_002343747 [Homo ... 50 6e-06
gi|60097902 filaggrin [Homo sapiens] 46 8e-05
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 44 5e-04
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 38 0.029
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.050
gi|207452735 epiplakin 1 [Homo sapiens] 36 0.086
gi|239754209 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|239748740 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo s... 35 0.19
gi|91208420 bassoon protein [Homo sapiens] 35 0.19
gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo sapi... 35 0.19
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 35 0.19
gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Hom... 35 0.19
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 35 0.19
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 35 0.19
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 35 0.19
gi|62122917 filaggrin family member 2 [Homo sapiens] 35 0.25
gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b ... 34 0.32
gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a ... 34 0.32
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 34 0.42
gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens] 33 0.55
gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens] 33 0.55
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 33 0.55
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 33 0.55
gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens] 33 0.72
>gi|169214874 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1162 bits (3005), Expect = 0.0
Identities = 583/583 (100%), Positives = 583/583 (100%)
Query: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL
Sbjct: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD
Sbjct: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ
Sbjct: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG
Sbjct: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
Query: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW
Sbjct: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
Query: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH
Sbjct: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
Query: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA
Sbjct: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
Query: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV
Sbjct: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
Query: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR
Sbjct: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
Query: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR
Sbjct: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
>gi|169215109 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1162 bits (3005), Expect = 0.0
Identities = 583/583 (100%), Positives = 583/583 (100%)
Query: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL
Sbjct: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD
Sbjct: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ
Sbjct: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG
Sbjct: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
Query: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW
Sbjct: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
Query: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH
Sbjct: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
Query: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA
Sbjct: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
Query: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV
Sbjct: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
Query: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR
Sbjct: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
Query: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR
Sbjct: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
>gi|169214604 PREDICTED: hypothetical protein [Homo sapiens]
Length = 583
Score = 1151 bits (2977), Expect = 0.0
Identities = 579/583 (99%), Positives = 579/583 (99%)
Query: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL
Sbjct: 1 MASGHRWQAGQACPPRSVIVSGVRGGTSEQDVTVLGHAQLRLGFDEELRPPEHHPLLLLL 60
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
ELQVGAGEGVEDGGDWEGHEQDAAQ AAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD
Sbjct: 61 ELQVGAGEGVEDGGDWEGHEQDAAQDAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ
Sbjct: 121 AGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ 180
Query: 181 DAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
DAQRPQHAQHQPHLVQVAVARAGLATA GGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG
Sbjct: 181 DAQRPQHAQHQPHLVQVAVARAGLATACGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAG 240
Query: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCW 300
RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKG QKLCPVPCW
Sbjct: 241 RLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGGQKLCPVPCW 300
Query: 301 ASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
ASQAEGPQAATW PYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH
Sbjct: 301 ASQAEGPQAATWTPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGDGHEEHRQAGEH 360
Query: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA
Sbjct: 361 LARQPRVRPLHHVAQSPHAAPQAALALGRALAVAALAVQRVVLFLPLHHLRELLNLLQVA 420
Query: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV
Sbjct: 421 ALAAAVQVVLRDAPVQQLLLEGQRAHLAQQPQLARAQEGQDSAEGPRVAVEEELVAGDVV 480
Query: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR
Sbjct: 481 VIAHVEDVVEVGAGLELAQARQRELVQRGPGQRVLDAAYVDDDPTAAVLGLTALAGLILR 540
Query: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR
Sbjct: 541 PQPLRPAVERALDGLALREEGRVEGGVRGAAQRAVVVVRIVSR 583
>gi|239757495 PREDICTED: hypothetical protein [Homo sapiens]
Length = 111
Score = 50.1 bits (118), Expect = 6e-06
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQR 231
+ARQ + +DA A+H HL QVA A L + QQR++ GQ H VD+ +R
Sbjct: 1 MARQLEYAEDAHE---AEHLHHLAQVAELLAALVAQCHTS--QQREIEGQHRHNVDEVER 55
Query: 232 APQEGELAGRLNEPQEELQGEPAHAHRL 259
+E GR E + L+ EP A L
Sbjct: 56 VAEEVARTGRQQEARRHLEAEPGDAEVL 83
>gi|239752012 PREDICTED: hypothetical protein XP_002348067 [Homo
sapiens]
Length = 111
Score = 50.1 bits (118), Expect = 6e-06
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQR 231
+ARQ + +DA A+H HL QVA A L + QQR++ GQ H VD+ +R
Sbjct: 1 MARQLEYAEDAHE---AEHLHHLAQVAELLAALVAQCHTS--QQREIEGQHRHNVDEVER 55
Query: 232 APQEGELAGRLNEPQEELQGEPAHAHRL 259
+E GR E + L+ EP A L
Sbjct: 56 VAEEVARTGRQQEARRHLEAEPGDAEVL 83
>gi|239746497 PREDICTED: hypothetical protein XP_002343747 [Homo
sapiens]
Length = 111
Score = 50.1 bits (118), Expect = 6e-06
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 172 VARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQR 231
+ARQ + +DA A+H HL QVA A L + QQR++ GQ H VD+ +R
Sbjct: 1 MARQLEYAEDAHE---AEHLHHLAQVAELLAALVAQCHTS--QQREIEGQHRHNVDEVER 55
Query: 232 APQEGELAGRLNEPQEELQGEPAHAHRL 259
+E GR E + L+ EP A L
Sbjct: 56 VAEEVARTGRQQEARRHLEAEPGDAEVL 83
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 46.2 bits (108), Expect = 8e-05
Identities = 59/228 (25%), Positives = 79/228 (34%), Gaps = 30/228 (13%)
Query: 67 GEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD-AGELG 125
G V D +GH +D+ +++ RG+ A R G P D AG
Sbjct: 3536 GSSVSQDSDSQGHSEDSERWSGSASRNHRGS-----AQEQSRDGSRHPTSHHEDRAGH-- 3588
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRP 185
GH E R+ G HAE G AA Q G +HH Q A
Sbjct: 3589 --GH----SAESSRQSGTHHAENSS-----GGQAASSHEQARSSAGERHGSHHQQSADSS 3637
Query: 186 QHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVD-QRQRAPQEGELAGRLNE 244
+H+ AV +G RG + Q D +GH D Q G+
Sbjct: 3638 RHSGIGHGQASSAVRDSG---HRGSSGSQASD---SEGHSEDSDTQSVSAHGQAGPHQQS 3691
Query: 245 PQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQ 292
QE +G A + L V+ E+ A G +GPS G Q
Sbjct: 3692 HQESTRGRSAGRSGRSG----SFLYQVSTHEQSESAHGRAGPSTGGRQ 3735
Score = 37.4 bits (85), Expect = 0.038
Identities = 69/340 (20%), Positives = 109/340 (32%), Gaps = 52/340 (15%)
Query: 80 EQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDS---------PPVAGRDAGELGAVGHL 130
E + AA H AR +PG+ H++ D S A RD+G G+ G
Sbjct: 1011 ETSSGGQAASSHEQARSSPGERHGSRHQQSADSSRHSGIPRRQASSAVRDSGHWGSSGSQ 1070
Query: 131 VLDDVEQGREEGD-----GHAEE-------EQQEPELAGAAAGREPQRLQPQGVARQA-- 176
D E EE D GH ++ ++ + +G +GR + Q+
Sbjct: 1071 ASDS-EGHSEESDTQSVSGHGQDGPHQQSHQESARDWSGGRSGRSGSFIYQVSTHEQSES 1129
Query: 177 ---------------HHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQ 221
HH Q +H+ Q + R G+ H+Q V +
Sbjct: 1130 AHGRTRTSTGRRQGSHHEQARDSSRHSASQEGQDTIRAHPGSRRGGRQGSHHEQS--VDR 1187
Query: 222 DGHQVDQRQRAPQEGELAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAG 281
GH +G Q A R +D + G+ G R +A
Sbjct: 1188 SGHSGSHHSHTTSQGR------SDASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAA 1241
Query: 282 GVSGPSRKGAQKLCPVPCWASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGA 341
+ SR ++ S+ Q ++ + + D + GS + G
Sbjct: 1242 SWADSSRHS--QVGQEQSSGSRTSRHQGSSVSQDSDSERHSDDSERLSGSASRNHHGSSR 1299
Query: 342 DGEVDGGDG---HEEHRQAGEHLARQPRVRPLHHVAQSPH 378
+ DG H+E R + H A R HH S H
Sbjct: 1300 EQSRDGSRHPGFHQEDRASHGHSADSSRQSGTHHTESSSH 1339
Score = 36.6 bits (83), Expect = 0.065
Identities = 44/177 (24%), Positives = 61/177 (34%), Gaps = 26/177 (14%)
Query: 67 GEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD-AGELG 125
G V D EGH +D+ +++ RG+ A RHG P D AG
Sbjct: 943 GSSVSQDSDSEGHSEDSERWSGSASRNHRGS-----AQEQSRHGSRHPRSHHEDRAGH-- 995
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRP 185
GH + R+ G HAE G AA Q G + H Q A
Sbjct: 996 --GH----SADSSRQSGTPHAETSS-----GGQAASSHEQARSSPGERHGSRHQQSADSS 1044
Query: 186 QHAQHQPHLVQVAVARAGLATARGGAV------HQQRDVVGQDGHQVD-QRQRAPQE 235
+H+ AV +G + G ++ D GH D Q++ QE
Sbjct: 1045 RHSGIPRRQASSAVRDSGHWGSSGSQASDSEGHSEESDTQSVSGHGQDGPHQQSHQE 1101
Score = 36.6 bits (83), Expect = 0.065
Identities = 61/257 (23%), Positives = 87/257 (33%), Gaps = 53/257 (20%)
Query: 67 GEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD-AGELG 125
G V D EGH +D+ +++ RG+ + RHG P D AG
Sbjct: 3212 GSSVSQDSDSEGHSEDSERWSGSASRNHRGSVQE-----QSRHGSRHPRSHHEDRAGH-- 3264
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRP 185
GH ++ R+ G HAE G AA Q G + H Q A
Sbjct: 3265 --GH----SADRSRQSGTRHAETSS-----GGQAASSHEQARSSPGERHGSRHQQSADSS 3313
Query: 186 QHAQHQPHLVQVAV------ARAGLATARGGAVHQQRDVVGQDGH-QVDQRQRAPQE--- 235
+H+ AV +G + ++ D GH Q Q++ QE
Sbjct: 3314 RHSGIPRGQASSAVRDSRHWGSSGSQASDSEGHSEESDTQSVSGHGQAGPHQQSHQESAR 3373
Query: 236 ---GELAGR----LNEPQEELQGEPAH------------AHRLHDEDVVAHLGTVALGER 276
G +GR L + Q E AH +H D H + +
Sbjct: 3374 DRSGGRSGRSGSFLYQVSTHEQSESAHGRTRTSTGRRQGSHHEQARDSSRH----SASQE 3429
Query: 277 GRDA-GGVSGPSRKGAQ 292
G+D G G SR+G Q
Sbjct: 3430 GQDTIRGHPGSSRRGRQ 3446
Score = 32.7 bits (73), Expect = 0.95
Identities = 41/179 (22%), Positives = 59/179 (32%), Gaps = 29/179 (16%)
Query: 67 GEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGA 126
G D EGH +++ + GH A H R G+ S GR L
Sbjct: 416 GSSGSQASDSEGHSENSDTQSVSGHGKAGLRQQSHQESTRGRSGERS----GRSGSSLYQ 471
Query: 127 VGHLVLDDVEQGRE------EGDGHAEEEQQEPELAGAAAGREPQRLQP---QGVARQAH 177
V D GR H E+ + + + G++ R P +G + +H
Sbjct: 472 VSTHEQPDSAHGRTGTSTGGRQGSHHEQARDSSRHSASQEGQDTIRGHPGSSRGGRQGSH 531
Query: 178 HVQDAQRPQHA-QHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQE 235
H Q R H+ H H + R A H GQ G + RQ +E
Sbjct: 532 HEQSVNRSGHSGSHHSHTT---------SQGRSDASH------GQSGSRSASRQTRNEE 575
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 43.5 bits (101), Expect = 5e-04
Identities = 39/188 (20%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 65 GAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHG-----DDSPPVAGR 119
G GEG E+ G+WEG E++ +G G + G ++ G
Sbjct: 944 GEGEGEEEEGEWEGEEEEG---EGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGE 1000
Query: 120 DAGELGAVGHLVLDDVEQGR-------EEGDGHAEEEQQE---PELAGAAAGREPQRLQP 169
+ GE G ++ E+G EEG+G EEE+ E E G E +R +
Sbjct: 1001 EEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNRE 1060
Query: 170 QGVARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQR 229
+ + + + + Q +V+ + + + +Q++ V G+ +QR
Sbjct: 1061 EEEEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGK-HKTYQKKSVTNTQGNGKEQR 1119
Query: 230 QRAPQEGE 237
+ P + +
Sbjct: 1120 SKMPVQSK 1127
Score = 36.2 bits (82), Expect = 0.086
Identities = 48/232 (20%), Positives = 83/232 (35%), Gaps = 23/232 (9%)
Query: 67 GEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGA 126
GEG E+ G+ E E + + +G G G+ G + GE G
Sbjct: 833 GEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGE-----------------GEEEGEEGE 875
Query: 127 VGHLVLDDVEQGREEGDGHAEEE--QQEPELAGAAAGREPQ---RLQPQGVARQAHHVQD 181
+ +G EEG+G EEE + E E G G E + + + +G + ++
Sbjct: 876 GEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEE 935
Query: 182 AQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGR 241
+ + + G G ++ + G++G + + EGE
Sbjct: 936 EGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEG 995
Query: 242 LNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQK 293
E +EE +GE +E+ G V GE G G +G ++
Sbjct: 996 EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVE-GEEGEGEGEEEEGEEEGEER 1046
Score = 35.0 bits (79), Expect = 0.19
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 61 ELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRD 120
E + G GEG E+ G+ EG + + +G + G+ + G
Sbjct: 924 EGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGE--GEGEEEGEGEGEEGEGEG 981
Query: 121 AGELGAVGHLVLDDVEQGREEGDGHAE-----EEQQEPELAGAAAGRE 163
E G + E+G EEG+G E EE++E E+ G G E
Sbjct: 982 EEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029
Score = 31.6 bits (70), Expect = 2.1
Identities = 72/348 (20%), Positives = 118/348 (33%), Gaps = 60/348 (17%)
Query: 24 RGGTSEQDVTVLGHAQLRLGFDEELRPPEH-HPLLLLLELQVGA----GEGVEDGGDWEG 78
R G E+++ + R G ++E + E H E++ G GEG E+ GD E
Sbjct: 688 RPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREE 747
Query: 79 HEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQG 138
E+ + +G G+ V R ++ AG+ E+G
Sbjct: 748 EEEKEGEGKEEGE-------GEEVE--GEREKEEGERKKEERAGK-----------EEKG 787
Query: 139 REEGD-GHAEEEQ-----QEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQP 192
EEGD G EEE+ +E E G G E + +G + ++ + +
Sbjct: 788 EEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVE----EGKGEREEEEEEGEGEEEEGEGE 843
Query: 193 HLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLNEPQEELQGE 252
G + + G++G + + EGE G +EE +GE
Sbjct: 844 EEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGE 903
Query: 253 PAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQKLCPVPCWASQAEG-PQAAT 311
E+ GE G G +G + EG +
Sbjct: 904 GEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGED---------GEGEGEEEEGE 954
Query: 312 WEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDG------GDGHEE 353
WE + + G G + G+G +GE +G G+G EE
Sbjct: 955 WEG---------EEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEE 993
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 37.7 bits (86), Expect = 0.029
Identities = 48/207 (23%), Positives = 73/207 (35%), Gaps = 29/207 (14%)
Query: 67 GEGV----EDGGDWEGHEQDAAQYAAQGHYLARG-APGDHVAIAHRRHGDDSP------- 114
GEG+ E GG GHE + AA G G + G A G+ P
Sbjct: 1794 GEGISERGETGGQGSGHEDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEA 1853
Query: 115 PVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQE---------PELAGAAAGREPQ 165
P A DA E +DVE EG+ E E E PE GA A +
Sbjct: 1854 PEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEK 1913
Query: 166 RLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQ 225
QP+ + +A + P+ + + A A G + +V+ + +
Sbjct: 1914 EAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEA------EGQTQPESEVI--ESQE 1965
Query: 226 VDQRQRAPQEGELAGRLNEPQEELQGE 252
++ + E A + +E +GE
Sbjct: 1966 AEEEAQPESEDVEALEVEVETQEAEGE 1992
Score = 37.0 bits (84), Expect = 0.050
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 133 DDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQ-DAQRPQHAQHQ 191
+DVE EG+ EE+ +PE G A + + + Q V + + DAQ
Sbjct: 1998 EDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEA 2057
Query: 192 PHLVQVAVARAG-LATARGGAVHQQRDVVGQDGHQVDQRQ----RAPQ---EGELAGRLN 243
P + A G + A G A + DV Q+ Q + AP+ E + A +
Sbjct: 2058 PEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIE 2117
Query: 244 EPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQ 292
P+ E + +P + + + + G +DA G + P +G +
Sbjct: 2118 APETEGEAQP-ESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIE 2165
Score = 34.3 bits (77), Expect = 0.32
Identities = 40/191 (20%), Positives = 65/191 (34%), Gaps = 7/191 (3%)
Query: 64 VGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGE 123
V A E D + EG Q ++ P + P G +A E
Sbjct: 1851 VEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPE 1910
Query: 124 LGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQ 183
+ VE EG+ E E E + A AA + QP+ ++ ++
Sbjct: 1911 AEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEA 1970
Query: 184 RPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLN 243
+P+ + V+V A G A + DV + + Q A +E +
Sbjct: 1971 QPESEDVEALEVEVETQE-----AEGEAQPESEDVEAPEAE--GEMQEAEEEAQPESDGV 2023
Query: 244 EPQEELQGEPA 254
E Q + +GE A
Sbjct: 2024 EAQPKSEGEEA 2034
Score = 31.2 bits (69), Expect = 2.8
Identities = 31/136 (22%), Positives = 47/136 (34%), Gaps = 5/136 (3%)
Query: 52 EHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGD 111
E HP ++ Q GE + E E + A+G AP G
Sbjct: 2077 EAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIE----APETEGEAQPESEGI 2132
Query: 112 DSPPVAGRDAGELGAVGHLVLDDVEQGREEG-DGHAEEEQQEPELAGAAAGREPQRLQPQ 170
++P G E V + Q EG + EE+ +PEL G A QP+
Sbjct: 2133 EAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPE 2192
Query: 171 GVARQAHHVQDAQRPQ 186
+A + +P+
Sbjct: 2193 SEGIEAPEAEGEAQPE 2208
Score = 31.2 bits (69), Expect = 2.8
Identities = 28/128 (21%), Positives = 44/128 (34%), Gaps = 10/128 (7%)
Query: 68 EGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAV 127
EG+E + EG Q ++ P A G+ P G +A E
Sbjct: 2114 EGIE-APETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEE 2172
Query: 128 GHLVLDDVEQGREEGDGHAEEE---------QQEPELAGAAAGREPQRLQPQGVARQAHH 178
L+ VE EG+ E E + +PEL G A + QP+ +
Sbjct: 2173 AQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPE 2232
Query: 179 VQDAQRPQ 186
+ +P+
Sbjct: 2233 AEGEAQPE 2240
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 37.0 bits (84), Expect = 0.050
Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 144 GHAEEEQQEPELAGAAAG------REPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQV 197
G + + + P G AAG R+P+R P+ AQ +H P + V
Sbjct: 629 GASRAQARLPHSGGPAAGGGRQLKRDPER--PESAKAFGREGSGAQGEAEVRHPPVGIAV 686
Query: 198 AVAR----AGLATARGGAVHQQR-----DVVGQ---DGHQVDQRQRAPQEGELAGRLNEP 245
AVAR G G V Q+R +V G D VD R R +E L RL+
Sbjct: 687 AVARQKDSGGSGRLGPGLVDQERSLSLSNVKGHGRADEDCVDDRARHREERLLGARLDRD 746
Query: 246 QEEL---QGEPAHAHRLH 260
QE+L E A RLH
Sbjct: 747 QEKLLRESKELADLARLH 764
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 36.2 bits (82), Expect = 0.086
Identities = 25/75 (33%), Positives = 31/75 (41%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + R G P AGR G+ GR + +G E E QE
Sbjct: 2578 AEEAPGARPQLQDARRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 2624
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 2625 AAAAAAARRQEQTLR 2639
Score = 33.1 bits (74), Expect = 0.72
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 3112 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 3158
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 3159 AAAAAAARRQEQTLR 3173
Score = 33.1 bits (74), Expect = 0.72
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 3646 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 3692
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 3693 AAAAAAARRQEQTLR 3707
Score = 33.1 bits (74), Expect = 0.72
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 4714 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 4760
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 4761 AAAAAAARRQEQTLR 4775
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 13/75 (17%)
Query: 94 ARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
A APG + G P AGR G+ GR + +G E E QE
Sbjct: 4180 AEEAPGARPQLQDAWRGPREPGPAGRGDGD-------------SGRSQREGQGEGETQEA 4226
Query: 154 ELAGAAAGREPQRLQ 168
A AAA R+ Q L+
Sbjct: 4227 AAATAAARRQEQTLR 4241
>gi|239754209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 35.8 bits (81), Expect = 0.11
Identities = 61/206 (29%), Positives = 77/206 (37%), Gaps = 30/206 (14%)
Query: 35 LGHAQLRLGFDEELRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLA 94
L HA R+ E L P LL Q+ G V D G H Q A + A G
Sbjct: 50 LVHALARVPVQEGLAPEHGRELLGDALEQLLDGRAVADEGG--RHLQAAGRDVAHGRLHV 107
Query: 95 RGAPGDHVA----------IAHRRHGDDSPPVAG-RDAGELGAV--GHLVLDDVEQGREE 141
G P VA + H HG +P R + V GH VL E
Sbjct: 108 VGDPLHEVAAVLVLHVEHLLVHLLHGHAAPEDGSHRQVAAVARVAGGHHVLGVEHLLGEL 167
Query: 142 GDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVA-VA 200
G ++ P L A AG+ + + AR+ HHV H Q VQ+A A
Sbjct: 168 G------HRERPVLLAAPAGQGREAGHEEVQAREGHHV-------HRQLAQVCVQLAREA 214
Query: 201 RAGLATARGGAVHQQRDVVGQDGHQV 226
+AG A GG HQ +V G Q+
Sbjct: 215 QAGGDPAHGGR-HQVVEVPVGGGGQL 239
>gi|239748740 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 35.8 bits (81), Expect = 0.11
Identities = 61/206 (29%), Positives = 77/206 (37%), Gaps = 30/206 (14%)
Query: 35 LGHAQLRLGFDEELRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLA 94
L HA R+ E L P LL Q+ G V D G H Q A + A G
Sbjct: 50 LVHALARVPVQEGLAPEHGRELLGDALEQLLDGRAVADEGG--RHLQAAGRDVAHGRLHV 107
Query: 95 RGAPGDHVA----------IAHRRHGDDSPPVAG-RDAGELGAV--GHLVLDDVEQGREE 141
G P VA + H HG +P R + V GH VL E
Sbjct: 108 VGDPLHEVAAVLVLHVEHLLVHLLHGHAAPEDGSHRQVAAVARVAGGHHVLGVEHLLGEL 167
Query: 142 GDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVA-VA 200
G ++ P L A AG+ + + AR+ HHV H Q VQ+A A
Sbjct: 168 G------HRERPVLLAAPAGQGREAGHEEVQAREGHHV-------HRQLAQVCVQLAREA 214
Query: 201 RAGLATARGGAVHQQRDVVGQDGHQV 226
+AG A GG HQ +V G Q+
Sbjct: 215 QAGGDPAHGGR-HQVVEVPVGGGGQL 239
>gi|25777671 protein phosphatase 1, regulatory subunit 10 [Homo
sapiens]
Length = 940
Score = 35.0 bits (79), Expect = 0.19
Identities = 43/179 (24%), Positives = 52/179 (29%), Gaps = 21/179 (11%)
Query: 65 GAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRH---------GDDSPP 115
G G G+ GG HE + PG + HR H G P
Sbjct: 740 GPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHEGPGGGMGSGHRPHEGPGGSMGGGGGHRP 799
Query: 116 VAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGRE---PQRLQPQGV 172
G G G GH + G G GH E + G+ R P P G
Sbjct: 800 HEGPGGGISGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHG- 858
Query: 173 ARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVDQRQR 231
+ H V + H PH R GG H+ D G H D R
Sbjct: 859 -HRPHDVPGHRGHDHRGPPPH-----EHRGHDGPGHGGGGHRGHD--GGHSHGGDMSNR 909
Score = 29.6 bits (65), Expect = 8.0
Identities = 25/100 (25%), Positives = 30/100 (30%), Gaps = 18/100 (18%)
Query: 65 GAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPG--------DHVAIAHRRHGDDSPPV 116
G G G+ GG HE G + PG H HR H PP
Sbjct: 818 GPGGGMGAGGGHRPHEGPGGSMGGSGGHRPHEGPGHGGPHGHRPHDVPGHRGHDHRGPPP 877
Query: 117 ---AGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEP 153
G D G GH +G + G H + P
Sbjct: 878 HEHRGHDGPGHGGGGH-------RGHDGGHSHGGDMSNRP 910
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 35.0 bits (79), Expect = 0.19
Identities = 38/141 (26%), Positives = 52/141 (36%), Gaps = 23/141 (16%)
Query: 96 GAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEE---EQQE 152
G PG H + RHGD +GR GE E GR HA + +
Sbjct: 3634 GGPGRHASAKEHRHGDHGRH-SGRHTGE------------EPGRRAAKPHARDLGRHEAR 3680
Query: 153 PELAGAAAGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVARAGLATARGGAV 212
P ++A P++ QP G A + Q + R A H + ++ G A G
Sbjct: 3681 PHSQPSSAPAMPKKGQP-GYPSSAEYSQPS-RASSAYH-----HASDSKKGSRQAHSGPA 3733
Query: 213 HQQRDVVGQDGHQVDQRQRAP 233
Q Q Q+ RQ AP
Sbjct: 3734 ALQSKAEPQAQPQLQGRQAAP 3754
Score = 30.4 bits (67), Expect = 4.7
Identities = 49/200 (24%), Positives = 66/200 (33%), Gaps = 30/200 (15%)
Query: 79 HEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGR--DAGELGAVGHLVLDDVE 136
H +D ++ A+ H AP A + G P + + H D +
Sbjct: 3670 HARDLGRHEARPHSQPSSAP------AMPKKGQPGYPSSAEYSQPSRASSAYHHASDSKK 3723
Query: 137 QGREEGDGHAE-----EEQQEPELAGAAAGREPQRLQ-------PQGVARQAHHVQDAQR 184
R+ G A E Q +P+L G A PQ+ Q P G A + Q Q+
Sbjct: 3724 GSRQAHSGPAALQSKAEPQAQPQLQGRQAAPGPQQSQSPSSRQIPSGAASRQPQTQQQQQ 3783
Query: 185 ------PQHAQHQPHLVQVA--VARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEG 236
PQ A Q L Q + R A A Q G Q RA Q
Sbjct: 3784 GLGLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTN 3843
Query: 237 ELAGRLNEPQE--ELQGEPA 254
G PQ+ Q +PA
Sbjct: 3844 GSKGTAKAPQQGRAPQAQPA 3863
>gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo
sapiens]
Length = 283
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 66 AGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGD 111
AG+GV GGD++GH + H + GAP A +HGD
Sbjct: 178 AGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQELGAAHKHGD 223
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 35.0 bits (79), Expect = 0.19
Identities = 43/179 (24%), Positives = 67/179 (37%), Gaps = 28/179 (15%)
Query: 146 AEEEQQEPELAGAAA-GREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHLVQVAVARAGL 204
A QQ P + GR PQ+ P VA HH + + A P ++++ +AG
Sbjct: 983 AARSQQHPSVPRRMTPGRAPQQQPPPPVATSQHH--PGPQSRDAGRSPSQPRLSLTQAG- 1039
Query: 205 ATARGGAVHQQRDVVGQDGHQVDQRQRAP-----QEGELAGRLNEPQEELQGE----PAH 255
R Q R D + R P Q+ + G ++ E++ + PAH
Sbjct: 1040 ---RPRPTSQGRSHSSSDPYTASSRGMLPTALQNQDEDAQGSYDDDSTEVEAQDVRAPAH 1096
Query: 256 AHRLHD--------EDVVAHLGTVALGERGRDAGGVSGPSRK----GAQKLCPVPCWAS 302
A R + + V + G A G+ G + P+R G Q VP A+
Sbjct: 1097 AARAKEAAASLPKHQQVESPTGAGAGGDHRSQRGHAASPARPSRPGGPQSRARVPSRAA 1155
>gi|40255149 Rho guanine nucleotide exchange factor (GEF) 19 [Homo
sapiens]
Length = 802
Score = 35.0 bits (79), Expect = 0.19
Identities = 41/146 (28%), Positives = 53/146 (36%), Gaps = 35/146 (23%)
Query: 37 HAQLRLGFDEELRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARG 96
H+ LRLG + R L G+G G G G E + + + G ++R
Sbjct: 206 HSSLRLGRNSAARA-----------LISGSGTGAAREGKASGMEARSVEMS--GDRVSRP 252
Query: 97 APGDHVAIAHRRHGD---------DSPPVAGRDAGE-------LGAVGHLVLDDVEQGRE 140
APGD R GD + PP+ R E L +V + DV RE
Sbjct: 253 APGDS------REGDWSEPRLDTQEEPPLGSRSTNERRQSRFLLNSVLYQEYSDVASARE 306
Query: 141 EGDGHAEEEQQEPELAGAAAGREPQR 166
EEE E GA G P R
Sbjct: 307 LRRQQREEEGPGDEAEGAEEGPGPPR 332
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 35.0 bits (79), Expect = 0.19
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 237 ELAGRLNEPQEELQGEPAHAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRKGAQK 293
EL R E +EEL+ E A R+ + A L ER +AGG S R+G +K
Sbjct: 1159 ELQARAEELEEELEAERAARARVEKQRAEAARELEELSERLEEAGGASAGQREGCRK 1215
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 66 AGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGD 111
AG+GV GGD++GH + H + GAP A +HGD
Sbjct: 325 AGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQELGAAHKHGD 370
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 35.0 bits (79), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 66 AGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGD 111
AG+GV GGD++GH + H + GAP A +HGD
Sbjct: 329 AGDGVAAGGDYKGHSKFLVTAQNPAHEPSPGAPAPQELGAAHKHGD 374
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 34.7 bits (78), Expect = 0.25
Identities = 56/250 (22%), Positives = 86/250 (34%), Gaps = 35/250 (14%)
Query: 67 GEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHG------DDSPPVAGRD 120
G G + D EG+ + ++ H AR G+ +I H RHG D+ A
Sbjct: 1725 GSGHSEYSDSEGYSGVSHTHSGHTHGQARSQHGESESIVHERHGTIHGQTGDTTRHAHSG 1784
Query: 121 AGELGAVGHLVLDDVEQGREE---GDGHAEEEQQEPELAGAAAGRE-PQRLQPQGVARQA 176
G+ G G E +GH+ Q+ P G G+ Q + + + +
Sbjct: 1785 HGQSTQTGSRTTGRRSSGHSEYSDSEGHSGFSQR-PHSRGHTHGQAGSQHGESESIVDER 1843
Query: 177 H---HVQDAQRPQHAQH------QPHLVQVAVARAGLATARGGAVHQQRDVVGQDGHQVD 227
H H Q H+Q Q R+G + + VH GH
Sbjct: 1844 HGTTHGQTGDTSGHSQSGHGQSTQSGSSTTGRRRSGHSESSDSEVHSGGSHT-HSGH--T 1900
Query: 228 QRQRAPQEGELAGRLNEPQEELQGEPA----HAHRLHDEDVVAHLGTVALGERG------ 277
Q Q GE +++ + G+ H H H + + G+ G RG
Sbjct: 1901 HSQARSQHGESESTVHKRHQTTHGQTGDTTEHGHPSHGQTI--QTGSRTTGRRGSGHSEY 1958
Query: 278 RDAGGVSGPS 287
D+ G SG S
Sbjct: 1959 SDSEGPSGVS 1968
Score = 30.4 bits (67), Expect = 4.7
Identities = 46/229 (20%), Positives = 75/229 (32%), Gaps = 35/229 (15%)
Query: 69 GVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVG 128
G + D EGH + ++ H A G+ + H RHG G+ G
Sbjct: 2029 GHSEYSDSEGHSGVSHTHSGHAHGQAGSQHGESGSSVHERHGTTH--------GQTG--- 2077
Query: 129 HLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAH----HVQDAQR 184
+ R GH + Q+ AG + + + +H H R
Sbjct: 2078 -------DTTRHAHSGHGQSTQRGSRTAGRRGSGHSESSDSEVHSGVSHTHSGHTYGQAR 2130
Query: 185 PQHAQHQP--HLVQVAV-ARAGLATARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGR 241
QH + H Q + + G T G + H Q Q G + RQR+
Sbjct: 2131 SQHGESGSAIHGRQGTIHGQTGDTTRHGQSGHGQST---QTGSRTTGRQRSSH-----SE 2182
Query: 242 LNEPQEELQGEPAHAHRLHDEDVVAH--LGTVALGERGRDAGGVSGPSR 288
++ + + P H+ H + H G+ G +G G +R
Sbjct: 2183 SSDSEVHSEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQTGDTTR 2231
>gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b
[Homo sapiens]
Length = 806
Score = 34.3 bits (77), Expect = 0.32
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 68 EGVE--DGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELG 125
EG+ DG E E++ A AA G + A + +GDD G D ELG
Sbjct: 94 EGISALDGDQMELGEENGAAGAADS-----GPMEEEEAASEDENGDDQGFQEGED--ELG 146
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQA 176
D E+G + +GH E++ Q P A ++ Q Q +G A++A
Sbjct: 147 --------DEEEGAGDENGHGEQQPQPP------ATQQQQPQQQRGAAKEA 183
>gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a
[Homo sapiens]
Length = 825
Score = 34.3 bits (77), Expect = 0.32
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 23/111 (20%)
Query: 68 EGVE--DGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELG 125
EG+ DG E E++ A AA G + A + +GDD G D ELG
Sbjct: 94 EGISALDGDQMELGEENGAAGAADS-----GPMEEEEAASEDENGDDQGFQEGED--ELG 146
Query: 126 AVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQA 176
D E+G + +GH E++ Q P A ++ Q Q +G A++A
Sbjct: 147 --------DEEEGAGDENGHGEQQPQPP------ATQQQQPQQQRGAAKEA 183
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 33.9 bits (76), Expect = 0.42
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 11/111 (9%)
Query: 63 QVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAG 122
Q AG+G +D G +G Q Q QG +G P + G PP GR G
Sbjct: 57 QPSAGDGNQDDGPQQGPPQQGGQ-QQQGPPPPQGKPQ-----GPPQQGGHPPPPQGRPQG 110
Query: 123 ELGAVGHLVLDDVEQGREEGDGHAEEEQQ--EPELAGAAAGREPQRLQPQG 171
GH +GR +G QQ P G G PQ +PQG
Sbjct: 111 PPQQGGH---PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQG 158
Score = 30.8 bits (68), Expect = 3.6
Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 70 VEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGH 129
+ DGGD E + Q G ++ + GD + DD P G G
Sbjct: 32 ISDGGDSEQFLDEERQGPPLGGQQSQPSAGDG-------NQDDGPQQGPPQQGGQQQQGP 84
Query: 130 LVLDDVEQGREEGDGHAEEEQQEPELAGAAAGR-EPQRLQPQGVARQAHHVQDAQRPQHA 188
QG + GH Q P+ G P R +PQG +Q H Q P
Sbjct: 85 PPPQGKPQGPPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPG 144
Query: 189 QHQ 191
+ Q
Sbjct: 145 KPQ 147
>gi|222418615 integrin alpha 7 isoform 3 [Homo sapiens]
Length = 1044
Score = 33.5 bits (75), Expect = 0.55
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 30/98 (30%)
Query: 72 DGGDW-------EGHEQ-------DAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVA 117
DGG+W +GHEQ AA ++ HYL GAPG +
Sbjct: 80 DGGEWKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTY-------------NWK 126
Query: 118 GRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPEL 155
G EL A G L ++ G E G E++Q+P L
Sbjct: 127 GTARVELCAQGSADLAHLDDGPYEAGG---EKEQDPRL 161
>gi|222418613 integrin alpha 7 isoform 1 precursor [Homo sapiens]
Length = 1141
Score = 33.5 bits (75), Expect = 0.55
Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 30/98 (30%)
Query: 72 DGGDW-------EGHEQ-------DAAQYAAQGHYLARGAPGDHVAIAHRRHGDDSPPVA 117
DGG+W +GHEQ AA ++ HYL GAPG +
Sbjct: 177 DGGEWKFCEGRPQGHEQFGFCQQGTAAAFSPDSHYLLFGAPGTY-------------NWK 223
Query: 118 GRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPEL 155
G EL A G L ++ G E G E++Q+P L
Sbjct: 224 GTARVELCAQGSADLAHLDDGPYEAGG---EKEQDPRL 258
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.5 bits (75), Expect = 0.55
Identities = 52/234 (22%), Positives = 88/234 (37%), Gaps = 40/234 (17%)
Query: 48 LRPPEHHPLLLLLELQVGAGEGVEDGGDWEGHEQDAAQYAAQGHYLARGAPGDHVAIAHR 107
L PP H LL+ +L +G + G Q A Q H A G G H +
Sbjct: 3776 LMPPSSHQGLLVQQLSPQPPQGPQG---MLGPAQVAV--LQQQHPGALGPQGPHRQVLMT 3830
Query: 108 RHGDDSPPVAGRDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAA-------- 159
+ S P + G +GH ++ +Q +++ + QQ+ +AG +
Sbjct: 3831 QSRVLSSPQLAQQGQ--GLMGHRLVTAQQQQQQQ------QHQQQGSMAGLSHLQQSLMS 3882
Query: 160 -AGREPQRLQPQGVARQAHHVQDAQRPQHAQHQPHL------------VQVAVARAGLAT 206
+G+ QP G +Q Q Q+ Q Q Q +Q + L
Sbjct: 3883 HSGQPKLSAQPMGSLQQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQ 3942
Query: 207 ARGGAVHQQRDVVGQDGHQVDQRQRAPQEGELAGRLNE------PQEELQGEPA 254
+ + QQ+ + Q Q Q+ + Q+ + G LN+ PQ++ Q + A
Sbjct: 3943 QQQQQLQQQQQQLQQQQQQQQQQFQQQQQQQQMGLLNQSRTLLSPQQQQQQQVA 3996
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 33.5 bits (75), Expect = 0.55
Identities = 59/255 (23%), Positives = 88/255 (34%), Gaps = 36/255 (14%)
Query: 119 RDAGELGAVGHLVLDDVEQGREEGDGHAEEEQQEPELAGAAAGREPQRLQPQGVARQAHH 178
R+AGE+ +G L L EQ R G +PE + A G R + + +
Sbjct: 571 REAGEVELMGVLALSKEEQERSLEAGPRHAGSVKPEASEAFPGAWENRTRKD--MERGNT 628
Query: 179 VQDAQRPQHAQHQPHLVQVAVARAGLATARGGAVHQQRDV--VGQDGHQVDQRQRAPQEG 236
+DA + + + + A + A A G + +V G +G +EG
Sbjct: 629 QEDAADGEQREEE----ETAGGQTLAAEAEGDRESELSEVPEAGGEGLTTQDAGCGTEEG 684
Query: 237 ELAGRLNEPQEELQGEPA-------HAHRLHDEDVVAHLGTVALGERGRDAGGVSGPSRK 289
E + N+ + G A A+ ED A + A V P R+
Sbjct: 685 EASVSENQELDGSTGADAGPCPSLGEAYARETEDEEAEADRTSRRGWRLQAVAVGLPDRE 744
Query: 290 GAQKLCPVPCWASQAEGPQAATWEPYFHAYKDRLDLDLGLGSVLKYLAGQGADGEVDGGD 349
AQ S A G P+ A G G L+ + GQG D +
Sbjct: 745 DAQT-------GSVAAGIMGGDVVPHISA--------AGAGEALEGVLGQGWDSK----- 784
Query: 350 GHEEHRQAGEHLARQ 364
+E AGEH Q
Sbjct: 785 -EKEEAAAGEHAGGQ 798
>gi|38787935 BMP-2 inducible kinase isoform a [Homo sapiens]
Length = 1161
Score = 33.1 bits (74), Expect = 0.72
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 93 LARGAPGDHVAIAHRRHGDDSPPVAGRDAGELGAVGHLVLDDVEQGR--------EEGDG 144
LA G G+H R G+ + G+ + H VL ++QG +
Sbjct: 399 LAPGEFGNHRPKGALRPGNGPEILLGQGPPQQPPQQHRVLQQLQQGDWRLQQLHLQHRHP 458
Query: 145 HAEEEQQEPELAGAAAGREPQRLQPQGVARQAHH---VQDA--QRPQHAQHQPHLVQ 196
H +++QQ+ + ++ Q+ Q Q HH +QDA Q+ QHA Q ++Q
Sbjct: 459 HQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQ 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,767,569
Number of Sequences: 37866
Number of extensions: 1278238
Number of successful extensions: 4893
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 4653
Number of HSP's gapped (non-prelim): 263
length of query: 583
length of database: 18,247,518
effective HSP length: 108
effective length of query: 475
effective length of database: 14,157,990
effective search space: 6725045250
effective search space used: 6725045250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.