Search of human proteins with 111607426

Search of human proteins with 111607426

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|111607426 IQ motif containing J isoform CaMBPv2 [Homo
sapiens]
         (112 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|111607426 IQ motif containing J isoform CaMBPv2 [Homo sapiens]     226   4e-60
gi|111607465 IQ motif containing J isoform CaMBPv1 [Homo sapiens]     195   7e-51
gi|55749678 ninein-like [Homo sapiens]                                 31   0.19 
gi|148539870 histone deacetylase 7 isoform d [Homo sapiens]            29   0.71 
gi|169234807 histone deacetylase 7 isoform a [Homo sapiens]            29   0.71 
gi|15055549 fibroblast growth factor 5 isoform 2 precursor [Homo...    28   1.2  
gi|73486655 fibroblast growth factor 5 isoform 1 precursor [Homo...    28   1.2  
gi|157502199 CUB and Sushi multiple domains 1 [Homo sapiens]           28   1.2  
gi|32698714 hypothetical protein LOC284058 [Homo sapiens]              28   1.2  
gi|33457316 pleckstrin homology domain containing, family O memb...    28   1.2  
gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo s...    28   1.6  
gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]                  28   1.6  
gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]                  28   1.6  
gi|13540600 nudE nuclear distribution gene E homolog (A. nidulan...    28   2.1  
gi|71284108 nudE nuclear distribution gene E homolog (A. nidulan...    28   2.1  
gi|55953110 retinoblastoma protein-binding zinc finger protein i...    28   2.1  
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    28   2.1  
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    28   2.1  
gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo sapi...    28   2.1  
gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]             28   2.1  
gi|22538422 activating transcription factor 2 [Homo sapiens]           27   2.7  
gi|223633988 hypothetical protein LOC85379 [Homo sapiens]              27   3.5  
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]           27   3.5  
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]           27   3.5  
gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]    27   3.5  
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]           27   3.5  
gi|48762697 growth factor receptor-bound protein 10 isoform c [H...    27   3.5  
gi|239750064 PREDICTED: hypothetical protein XP_002347285 [Homo ...    27   3.5  
gi|48762695 growth factor receptor-bound protein 10 isoform c [H...    27   3.5  
gi|48762693 growth factor receptor-bound protein 10 isoform b [H...    27   3.5  

>gi|111607426 IQ motif containing J isoform CaMBPv2 [Homo sapiens]
          Length = 112

 Score =  226 bits (575), Expect = 4e-60
 Identities = 112/112 (100%), Positives = 112/112 (100%)

Query: 1   MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY 60
           MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY
Sbjct: 1   MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY 60

Query: 61  LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVSVMFLFLCPDLTFN 112
           LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVSVMFLFLCPDLTFN
Sbjct: 61  LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVSVMFLFLCPDLTFN 112


>gi|111607465 IQ motif containing J isoform CaMBPv1 [Homo sapiens]
          Length = 159

 Score =  195 bits (495), Expect = 7e-51
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY 60
          MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY
Sbjct: 1  MRLEELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREY 60

Query: 61 LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTP 97
          LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTP
Sbjct: 61 LQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTP 97


>gi|55749678 ninein-like [Homo sapiens]
          Length = 1382

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 11/87 (12%)

Query: 4   EELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREYLQR 63
           EEL+ L N L+Q  DGK S E  QL + +       P  L    ++VK   +AW  Y Q 
Sbjct: 236 EELEDLFNKLDQDGDGKVSLEEFQLGLFSHE-----PALLLESSTRVK-PSKAWSHY-QV 288

Query: 64  QEPLGKRSPSPPSV----SSEKLSSSV 86
            E  G  + +  S+    SS +L SS+
Sbjct: 289 PEESGCHTTTTSSLVSLCSSLRLFSSI 315


>gi|148539870 histone deacetylase 7 isoform d [Homo sapiens]
          Length = 954

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 37  EKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSST 96
           E +PL     E  +K+  +  +   +R+ PL ++  +PPS+   + + ++  ++ S SST
Sbjct: 185 EHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSL-RRRPAETLGDSSPSSSST 243

Query: 97  PVS 99
           P S
Sbjct: 244 PAS 246


>gi|169234807 histone deacetylase 7 isoform a [Homo sapiens]
          Length = 991

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 37  EKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSST 96
           E +PL     E  +K+  +  +   +R+ PL ++  +PPS+   + + ++  ++ S SST
Sbjct: 185 EHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSL-RRRPAETLGDSSPSSSST 243

Query: 97  PVS 99
           P S
Sbjct: 244 PAS 246


>gi|15055549 fibroblast growth factor 5 isoform 2 precursor [Homo
          sapiens]
          Length = 123

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 52 IIQRAWREYLQRQEPLGKRSPSP----PSVSSEKLSSSVSMNTFSDSSTPVS 99
          +I  AW    +R  P G+  P+     P  SS + SSS +M++ S SS+P +
Sbjct: 14 LILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAA 65


>gi|73486655 fibroblast growth factor 5 isoform 1 precursor [Homo
          sapiens]
          Length = 268

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)

Query: 52 IIQRAWREYLQRQEPLGKRSPSP----PSVSSEKLSSSVSMNTFSDSSTPVS 99
          +I  AW    +R  P G+  P+     P  SS + SSS +M++ S SS+P +
Sbjct: 14 LILSAWAHGEKRLAPKGQPGPAATDRNPRGSSSRQSSSSAMSSSSASSSPAA 65


>gi|157502199 CUB and Sushi multiple domains 1 [Homo sapiens]
          Length = 3565

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 45   PLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSS 95
            P+ S V  +   W+ Y    E LGKR P+  +V     +SS    TFS++S
Sbjct: 3347 PVPSDVFFVNSLWKGYY---EYLGKRQPATLTVDWFNATSSKVNATFSEAS 3394


>gi|32698714 hypothetical protein LOC284058 [Homo sapiens]
          Length = 1105

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 55  RAWREYLQRQEP-LGKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVS 99
           R++R    R  P LG  +PS P  +S  +SSS S++ +S   +P S
Sbjct: 946 RSYRSSDGRTTPQLGSANPSTPQPASPDVSSSHSLSEYSHGQSPRS 991


>gi|33457316 pleckstrin homology domain containing, family O member
           2 [Homo sapiens]
          Length = 490

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 5/34 (14%)

Query: 64  QEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTP 97
           + P+G+R+P+P S SSE     VS  +  DS TP
Sbjct: 223 ETPVGERAPTPVSASSE-----VSPESQEDSETP 251


>gi|239753314 PREDICTED: similar to RIKEN cDNA C230030N03 [Homo
           sapiens]
          Length = 1183

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 28  LAMDAENNIEKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVS 87
           + ++ EN  E+ P + +  + K ++ Q +WR +L+ ++     SP  P++ S  L   V 
Sbjct: 853 IVLEKENTHERSPSSPKGEKEKSRLRQGSWRAFLKSKD---AGSPKKPTLVSLPLGPEVL 909

Query: 88  MNTFSDS 94
               +DS
Sbjct: 910 SPAETDS 916


>gi|56549645 nucleoporin 98kD isoform 4 [Homo sapiens]
          Length = 1726

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 9    LQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPL-ESKVKI 52
            L N  EQ+N G +  ENHQ+A   E      P+ ++PL ES  K+
Sbjct: 1136 LANSGEQLN-GSHELENHQIADSMEFGFLPNPVAVKPLTESPFKV 1179


>gi|21264365 nucleoporin 98kD isoform 1 [Homo sapiens]
          Length = 1800

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 9    LQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPL-ESKVKI 52
            L N  EQ+N G +  ENHQ+A   E      P+ ++PL ES  K+
Sbjct: 1136 LANSGEQLN-GSHELENHQIADSMEFGFLPNPVAVKPLTESPFKV 1179


>gi|13540600 nudE nuclear distribution gene E homolog (A.
           nidulans)-like 1 isoform B [Homo sapiens]
          Length = 345

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 37  EKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSST 96
           E   +++Q L+ + + +++      ++QE   K +PS P++  EK+ S+V   + S  +T
Sbjct: 161 ESLLVSVQRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQA-SLSLPAT 219

Query: 97  PV 98
           PV
Sbjct: 220 PV 221


>gi|71284108 nudE nuclear distribution gene E homolog (A.
           nidulans)-like 1 isoform A [Homo sapiens]
          Length = 328

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%)

Query: 37  EKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSST 96
           E   +++Q L+ + + +++      ++QE   K +PS P++  EK+ S+V   + S  +T
Sbjct: 161 ESLLVSVQRLKDEARDLRQELAVRERQQEVTRKSAPSSPTLDCEKMDSAVQA-SLSLPAT 219

Query: 97  PV 98
           PV
Sbjct: 220 PV 221


>gi|55953110 retinoblastoma protein-binding zinc finger protein
           isoform c [Homo sapiens]
          Length = 1481

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 65  EPL-GKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVS 99
           EPL    SP PP++SS   SSS S ++FS SS+  S
Sbjct: 837 EPLMSAASPGPPTLSSSS-SSSSSSSSFSSSSSSSS 871


>gi|20336260 retinoblastoma protein-binding zinc finger protein
            isoform b [Homo sapiens]
          Length = 1682

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 65   EPL-GKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVS 99
            EPL    SP PP++SS   SSS S ++FS SS+  S
Sbjct: 1038 EPLMSAASPGPPTLSSSS-SSSSSSSSFSSSSSSSS 1072


>gi|20336258 retinoblastoma protein-binding zinc finger protein
            isoform a [Homo sapiens]
          Length = 1718

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 65   EPL-GKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVS 99
            EPL    SP PP++SS   SSS S ++FS SS+  S
Sbjct: 1038 EPLMSAASPGPPTLSSSS-SSSSSSSSFSSSSSSSS 1072


>gi|154240677 hypothetical protein LOC399949 isoform 2 [Homo
           sapiens]
          Length = 169

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 17  NDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRA-WREYL------QRQEPLGK 69
           ++  +S ++  LA +   +I    L +Q  E KVK +Q+A  RE +      QR+E + K
Sbjct: 75  SENSHSSQSFHLASNKNRDIFAEALKIQESEEKVKYLQKAKTREEILQLLRKQREERISK 134

Query: 70  R---SPSPPSVSSEKLSSSVSMNTFSD 93
                P  P     K    VS +   D
Sbjct: 135 ELISLPYKPKAKEHKAKKVVSESDKED 161


>gi|154813195 DENN/MADD domain containing 2A [Homo sapiens]
          Length = 1009

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 7/67 (10%)

Query: 4   EELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLESKVK------IIQRAW 57
           + +KRL   +E  N GK + EN +   D E  ++ +   L  ++S++K       + R  
Sbjct: 498 KRVKRLSQSMES-NSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLAREL 556

Query: 58  REYLQRQ 64
            EY +RQ
Sbjct: 557 IEYQERQ 563


>gi|22538422 activating transcription factor 2 [Homo sapiens]
          Length = 505

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)

Query: 23  FENHQLAMDAENNIEKYPLNLQPLESKV---KIIQRAWREYLQRQEPLGKRSPSPPSVSS 79
           FEN +    +E++I+K PL+L PL + +   KI + +  E   +  PL    P P S +S
Sbjct: 92  FEN-EFKKASEDDIKKMPLDLSPLATPIIRSKIEEPSVVETTHQDSPL----PHPESTTS 146

Query: 80  EK 81
           ++
Sbjct: 147 DE 148


>gi|223633988 hypothetical protein LOC85379 [Homo sapiens]
          Length = 1806

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 57   WREYLQRQEPLGKRSPSPPSVSSEKLSSSVSMNTFSDSSTPVS 99
            W E  Q  E L   SP   + S+ K   S  +++ S  + P S
Sbjct: 1541 WTEQCQSGESLATESPDSSATSTRKQPPSSRLSSLSSQTEPTS 1583


>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
          Length = 2003

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 4    EELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLE-SKVKIIQRAWREYLQ 62
            + L  L   LEQ   GK ++E  +LA++AE  + +    L  L+ ++ +  QR  R  LQ
Sbjct: 1228 QALGELAEQLEQARRGKGAWEKTRLALEAE--VSELRAELSSLQTARQEGEQRRRRLELQ 1285

Query: 63   RQEPLGK 69
             QE  G+
Sbjct: 1286 LQEVQGR 1292


>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
          Length = 1995

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 4    EELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLE-SKVKIIQRAWREYLQ 62
            + L  L   LEQ   GK ++E  +LA++AE  + +    L  L+ ++ +  QR  R  LQ
Sbjct: 1220 QALGELAEQLEQARRGKGAWEKTRLALEAE--VSELRAELSSLQTARQEGEQRRRRLELQ 1277

Query: 63   RQEPLGK 69
             QE  G+
Sbjct: 1278 LQEVQGR 1284


>gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]
          Length = 326

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 5/33 (15%)

Query: 66  PLGKR-SPSPPSVSSEKLSSSVSMNTFSDSSTP 97
           P G+R SP PP ++   LSSS    +FS SS+P
Sbjct: 191 PSGRRTSPPPPGLAGPSLSSS----SFSPSSSP 219


>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
          Length = 2036

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 4    EELKRLQNPLEQVNDGKYSFENHQLAMDAENNIEKYPLNLQPLE-SKVKIIQRAWREYLQ 62
            + L  L   LEQ   GK ++E  +LA++AE  + +    L  L+ ++ +  QR  R  LQ
Sbjct: 1261 QALGELAEQLEQARRGKGAWEKTRLALEAE--VSELRAELSSLQTARQEGEQRRRRLELQ 1318

Query: 63   RQEPLGK 69
             QE  G+
Sbjct: 1319 LQEVQGR 1325


>gi|48762697 growth factor receptor-bound protein 10 isoform c [Homo
           sapiens]
          Length = 536

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/56 (32%), Positives = 23/56 (41%)

Query: 24  ENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSS 79
           EN  +AMD      +   N    +S       AWR+   R   LG +SP  PS  S
Sbjct: 371 ENSLVAMDFSGQTGRVIENPAEAQSAALEEGHAWRKRSTRMNILGSQSPLHPSTLS 426


>gi|239750064 PREDICTED: hypothetical protein XP_002347285 [Homo
           sapiens]
          Length = 1140

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 25  NHQLAMDAENNIEKYPLNLQPL-ESKVKIIQRAWREY-------LQRQEPLGKRSPSPPS 76
           N  L +   + I+K  +   PL ES  KI  +   +        ++ Q+  G  +   PS
Sbjct: 696 NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPS 755

Query: 77  VSSEKLSSSVSMN-TFSDSSTPVSVMF 102
            S++ LSSSVS +  FS S+ P    F
Sbjct: 756 ASTQALSSSVSSSKLFSSSTAPHETSF 782


>gi|48762695 growth factor receptor-bound protein 10 isoform c [Homo
           sapiens]
          Length = 536

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/56 (32%), Positives = 23/56 (41%)

Query: 24  ENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSS 79
           EN  +AMD      +   N    +S       AWR+   R   LG +SP  PS  S
Sbjct: 371 ENSLVAMDFSGQTGRVIENPAEAQSAALEEGHAWRKRSTRMNILGSQSPLHPSTLS 426


>gi|48762693 growth factor receptor-bound protein 10 isoform b [Homo
           sapiens]
          Length = 548

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 18/56 (32%), Positives = 23/56 (41%)

Query: 24  ENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREYLQRQEPLGKRSPSPPSVSS 79
           EN  +AMD      +   N    +S       AWR+   R   LG +SP  PS  S
Sbjct: 383 ENSLVAMDFSGQTGRVIENPAEAQSAALEEGHAWRKRSTRMNILGSQSPLHPSTLS 438


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,360,112
Number of Sequences: 37866
Number of extensions: 180001
Number of successful extensions: 755
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 720
Number of HSP's gapped (non-prelim): 77
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.