NDEL1 35211

Name: NDEL1	Sequence: fasta or formatted (328aa)		NCBI GI: 71284108
Description: nudE nuclear distribution gene E homolog (A. nidulans)-like 1 isoform A		Referenced in: Dynein and Dynactin
Other entries for this name: alt prot [345aa] nudE nuclear distribution gene E homolog (A. nidulans)-like 1 iso...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 28 2 C cysteine 0.9 3 1 D aspartate 5.8 19 2 E glutamate 11.3 37 2 F phenylalanine 4.0 13 2 G glycine 4.6 15 1 H histidine 0.9 3 1 I isoleucine 2.7 9 1 K lysine 7.3 24 1 L leucine 11.0 36 2 M methionine 0.9 3 1 N asparagine 4.0 13 1 P proline 3.4 11 1 Q glutamine 7.3 24 2 R arginine 6.7 22 1 S serine 8.8 29 2 T threonine 4.0 13 1 V valine 5.5 18 1 W tryptophan 0.3 1 1 Y tyrosine 2.1 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nudE nuclear distribution gene E homolog (A. nidulan... NDEL1 0.958 nudE nuclear distribution gene E homolog (A. nidulan... NDE1 0.513 nuclear distribution gene E homolog 1 NDE1 0.513 nuclear distribution gene E homolog 1 PDE4DIP 0.057 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.057 phosphodiesterase 4D interacting protein isoform 5 [... PDE4DIP 0.057 phosphodiesterase 4D interacting protein isoform 1 ... CYTSA 0.054 cytospin A CYTSA 0.054 cytospin A MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CGN 0.049 cingulin CARD11 0.049 caspase recruitment domain family, member 11 GCC1 0.047 Golgi coiled-coil protein 1 LOC727927 0.046 PREDICTED: similar to phosphodiesterase 4D interact... SYCP1 0.046 synaptonemal complex protein 1 CIT 0.044 citron TCHH 0.044 trichohyalin CCDC64 0.044 coiled-coil domain containing 64 MYH9 0.042 myosin, heavy polypeptide 9, non-muscle CCDC18 0.042 sarcoma antigen NY-SAR-41 EEA1 0.042 early endosome antigen 1, 162kD NUMA1 0.042 nuclear mitotic apparatus protein 1 GOLGB1 0.042 golgi autoantigen, golgin subfamily b, macrogolgin ... CEP63 0.041 centrosomal protein 63 isoform b CEP63 0.041 centrosomal protein 63 isoform a ERC2 0.041 cytomatrix protein p110 PPFIA2 0.041 PTPRF interacting protein alpha 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.