NDEL1 3472

Name: NDEL1	Sequence: fasta or formatted (345aa)		NCBI GI: 13540600
Description: nudE nuclear distribution gene E homolog (A. nidulans)-like 1 isoform B		Referenced in: Dynein and Dynactin
Other entries for this name: alt prot [328aa] nudE nuclear distribution gene E homolog (A. nidulans)-like 1 iso...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 31 2 C cysteine 0.9 3 1 D aspartate 5.8 20 2 E glutamate 10.4 36 2 F phenylalanine 3.5 12 2 G glycine 5.2 18 1 H histidine 0.9 3 1 I isoleucine 2.3 8 1 K lysine 6.7 23 1 L leucine 11.0 38 2 M methionine 0.9 3 1 N asparagine 4.1 14 1 P proline 5.2 18 4 Q glutamine 6.4 22 2 R arginine 6.7 23 1 S serine 9.9 34 2 T threonine 3.5 12 1 V valine 5.5 19 1 W tryptophan 0.3 1 1 Y tyrosine 2.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nudE nuclear distribution gene E homolog (A. nidulan... NDEL1 0.904 nudE nuclear distribution gene E homolog (A. nidulan... NDE1 0.485 nuclear distribution gene E homolog 1 NDE1 0.485 nuclear distribution gene E homolog 1 PDE4DIP 0.054 phosphodiesterase 4D interacting protein isoform 2 [... PDE4DIP 0.054 phosphodiesterase 4D interacting protein isoform 5 [... PDE4DIP 0.054 phosphodiesterase 4D interacting protein isoform 1 ... CYTSA 0.051 cytospin A CYTSA 0.051 cytospin A MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CGN 0.046 cingulin CARD11 0.046 caspase recruitment domain family, member 11 GCC1 0.045 Golgi coiled-coil protein 1 LOC727927 0.043 PREDICTED: similar to phosphodiesterase 4D interact... SYCP1 0.043 synaptonemal complex protein 1 CIT 0.042 citron TCHH 0.042 trichohyalin CCDC64 0.042 coiled-coil domain containing 64 MYH9 0.040 myosin, heavy polypeptide 9, non-muscle CCDC18 0.040 sarcoma antigen NY-SAR-41 EEA1 0.040 early endosome antigen 1, 162kD NUMA1 0.040 nuclear mitotic apparatus protein 1 GOLGB1 0.040 golgi autoantigen, golgin subfamily b, macrogolgin ... KIAA0947 0.039 hypothetical protein LOC23379 CEP63 0.039 centrosomal protein 63 isoform b CEP63 0.039 centrosomal protein 63 isoform a ERC2 0.039 cytomatrix protein p110 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.