Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169213353
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
(384 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 804 0.0
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 804 0.0
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens] 804 0.0
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 50 3e-06
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 49 1e-05
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 47 3e-05
gi|113416171 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|169166294 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|239756566 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|226498192 atonal homolog 8 [Homo sapiens] 43 4e-04
gi|169167057 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-04
gi|171543895 ataxin 2 [Homo sapiens] 43 5e-04
gi|78499633 phospholipase C, eta 2 [Homo sapiens] 42 0.001
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 41 0.002
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 40 0.003
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 40 0.003
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 40 0.003
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 40 0.003
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 40 0.003
gi|46409372 G protein-coupled receptor 153 [Homo sapiens] 40 0.003
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ... 40 0.004
gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens] 40 0.004
gi|40353727 synaptopodin isoform A [Homo sapiens] 40 0.004
gi|193083122 translocase of outer mitochondrial membrane 40 [Hom... 40 0.004
gi|193083120 translocase of outer mitochondrial membrane 40 [Hom... 40 0.004
gi|5174723 translocase of outer mitochondrial membrane 40 [Homo ... 40 0.004
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 40 0.005
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 804 bits (2076), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ 60
MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ
Sbjct: 1 MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ 60
Query: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL
Sbjct: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ 180
LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ
Sbjct: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ 180
Query: 181 RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA 240
RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA
Sbjct: 181 RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA 240
Query: 241 AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP 300
AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP
Sbjct: 241 AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP 300
Query: 301 SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP 360
SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP
Sbjct: 301 SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP 360
Query: 361 RHHLELIIAKYVSTLMLDFPTSRP 384
RHHLELIIAKYVSTLMLDFPTSRP
Sbjct: 361 RHHLELIIAKYVSTLMLDFPTSRP 384
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 804 bits (2076), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ 60
MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ
Sbjct: 1 MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ 60
Query: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL
Sbjct: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ 180
LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ
Sbjct: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ 180
Query: 181 RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA 240
RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA
Sbjct: 181 RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA 240
Query: 241 AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP 300
AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP
Sbjct: 241 AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP 300
Query: 301 SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP 360
SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP
Sbjct: 301 SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP 360
Query: 361 RHHLELIIAKYVSTLMLDFPTSRP 384
RHHLELIIAKYVSTLMLDFPTSRP
Sbjct: 361 RHHLELIIAKYVSTLMLDFPTSRP 384
>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 804 bits (2076), Expect = 0.0
Identities = 384/384 (100%), Positives = 384/384 (100%)
Query: 1 MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ 60
MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ
Sbjct: 1 MQTVLCTIICNLTVTAAVTACLREPGAVSNPGLTSFTVLCVNWQGEKRRLGNERGYSSHQ 60
Query: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL
Sbjct: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ 180
LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ
Sbjct: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQ 180
Query: 181 RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA 240
RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA
Sbjct: 181 RRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERA 240
Query: 241 AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP 300
AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP
Sbjct: 241 AGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPP 300
Query: 301 SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP 360
SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP
Sbjct: 301 SSTVASHCKKAWIRNLIRATLLCEARRLRTSGLVPKSLSRGQALWEHGLPATHPVRMQCP 360
Query: 361 RHHLELIIAKYVSTLMLDFPTSRP 384
RHHLELIIAKYVSTLMLDFPTSRP
Sbjct: 361 RHHLELIIAKYVSTLMLDFPTSRP 384
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 50.4 bits (119), Expect = 3e-06
Identities = 63/190 (33%), Positives = 71/190 (37%), Gaps = 29/190 (15%)
Query: 118 VWLL-SRA--EVRPRS-ALGSSRRGLGDKGPRSRRAAE------FTQARPTRKRR----- 162
VWLL SR E++ R+ G+S G D P R AA F Q R R +R
Sbjct: 65 VWLLRSRGFREIKERAQGPGASPWGRWDWSPSPRFAARLSTSSPFPQGRAQRPQRGGVDL 124
Query: 163 --TPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQ 220
TPGG R + R+AG RA P P P P PA P
Sbjct: 125 PATPGGPRGQCA---GRSGDVLRRAGRRRARPPPVPRLPAPRAPRRPRGPATPDPSPPAG 181
Query: 221 RPHLSRGQWRLLPRRRPE-----RAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWA 275
RPH G R P RRP RA G G R + G G A R A
Sbjct: 182 RPHGPAG--RAAPGRRPGCTAQLRAPGRRG--RQRLLVHPGGGGRRQWQRLARARRAALL 237
Query: 276 GLGPFWHLRR 285
LG HLRR
Sbjct: 238 ALGALAHLRR 247
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 48.5 bits (114), Expect = 1e-05
Identities = 58/210 (27%), Positives = 75/210 (35%), Gaps = 21/210 (10%)
Query: 71 PELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWLLSRAEVRPRS 130
P P RP RP R +S+ R RR P + D+ A R E
Sbjct: 2218 PATPAAAEQVRP-RPERQESADRAEELPRRRRPERQESVDQSEEAARRRRPERQESAEHE 2276
Query: 131 ALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR-------RQRRR 183
A S G ++ R R E R ++ + P G ++ + Q +
Sbjct: 2277 AAHSLTLGRYEQMERRRERRE----RRLERQESSEQEMPIRGDLVKGKATLADIVEQLQE 2332
Query: 184 KAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPE-RAAG 242
K AGP+L P P P P P+ RP R + R PRRRP R G
Sbjct: 2333 KEAGPGLPAGPSL--PQPRELPPGRLPNGLELPERTPRPDRPRARDRPKPRRRPRPREGG 2390
Query: 243 SAGSCSSRRALPASGSGAAMTGSWAAPPRP 272
G R+ PA G GS APP P
Sbjct: 2391 EGGGSRRSRSAPAQG------GSAPAPPPP 2414
Score = 32.3 bits (72), Expect = 0.74
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 162 RTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPE 219
RTP RP A + RR+ R + G E G+ + + P GS P P T Q E
Sbjct: 2365 RTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPPTHTVQHE 2422
Score = 30.8 bits (68), Expect = 2.1
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 8/117 (6%)
Query: 124 AEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARP-TRKRRTPGGGRPEAGCWLENRRQRR 182
A+ P G RGL P +RRA++ A TR +PE L+ R R
Sbjct: 2142 AKAAPLLRPGGYERGLE---PLARRASDTLSAEVRTRVGYVRQELKPER---LQPRIDRL 2195
Query: 183 RKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPER 239
+ A P A +P P+ A P+PE++ R + L RRRPER
Sbjct: 2196 PEIPGRVEPAALPAAPEDAAETPATPAAAEQVRPRPERQESADRAE-ELPRRRRPER 2251
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 47.0 bits (110), Expect = 3e-05
Identities = 69/277 (24%), Positives = 92/277 (33%), Gaps = 33/277 (11%)
Query: 46 EKRRLGNERGYSSHQWPQKHPYHLLPELPTQISSSRPTRPR---------RCKSSSRPHL 96
++R +R + H H +H P + + RP R R S R H+
Sbjct: 2197 QERGRPKDRKHRQHHHHHHHHHHPPPPDKDRYAQERPDHGRARARDQRWSRSPSEGREHM 2256
Query: 97 ARGRRSPLKAAQ-----QDRGLPAWGVWLLSRAEVRPRSALGSSR--RGLGDKGPRSRRA 149
A + S + P G L + PR + S R G GP ++
Sbjct: 2257 AHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQQQQ 2316
Query: 150 AEFTQ------ARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTP--PLP 201
+ Q ARP R + G R G E R G +G P + P P
Sbjct: 2317 QQQQQQQQQAVARPGRAATS--GPRRYPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGP 2374
Query: 202 AGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGSGA- 260
A S P + A P PH+S G P GS P SG G
Sbjct: 2375 ARSESPRACRHGGARWPASGPHVSEGP------PGPRHHGYYRGSDYDEADGPGSGGGEE 2428
Query: 261 AMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGP 297
AM G++ APP A G R+ R G C P
Sbjct: 2429 AMAGAYDAPPPVRHASSGATGRSPRTPRASGPACASP 2465
>gi|113416171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 44.7 bits (104), Expect = 1e-04
Identities = 45/141 (31%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLP 201
K PR + A AR R +P RP C E R+ R AG G L+ P P
Sbjct: 107 KEPRRQSRATGKSARTRRACASPC--RPGRHCGPETARRPRPLAGTTFCGGARVLSNPPP 164
Query: 202 AGS-----PDPPSP---AATAAPQPEQRPHLSRGQWRLLPRRRPE---RAAGSAGSCSSR 250
+GS P P P AT+A P++ P W PRRR + R + C+ R
Sbjct: 165 SGSGGDARPSPLVPRRCRATSASLPQETPFALSVVW--APRRRSQGDARGRRTGVPCAKR 222
Query: 251 RALPASGSGAAMTGSWAAPPR 271
P +G AA SW+ R
Sbjct: 223 ---PPAGWLAAAVTSWSPASR 240
>gi|169166294 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 44.7 bits (104), Expect = 1e-04
Identities = 45/141 (31%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLP 201
K PR + A AR R +P RP C E R+ R AG G L+ P P
Sbjct: 107 KEPRRQSRATGKSARTRRACASPC--RPGRHCGPETARRPRPLAGTTFCGGARVLSNPPP 164
Query: 202 AGS-----PDPPSP---AATAAPQPEQRPHLSRGQWRLLPRRRPE---RAAGSAGSCSSR 250
+GS P P P AT+A P++ P W PRRR + R + C+ R
Sbjct: 165 SGSGGDARPSPLVPRRCRATSASLPQETPFALSVVW--APRRRSQGDARGRRTGVPCAKR 222
Query: 251 RALPASGSGAAMTGSWAAPPR 271
P +G AA SW+ R
Sbjct: 223 ---PPAGWLAAAVTSWSPASR 240
>gi|239756566 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 44.3 bits (103), Expect = 2e-04
Identities = 51/149 (34%), Positives = 57/149 (38%), Gaps = 29/149 (19%)
Query: 161 RRTPGGGRPEAGCW---LENRRQRRRKAGAERAG-AGPTLTP----PLPAGSPDPPSPAA 212
R TPGG C+ NR + R G AG AGP +P G PS A
Sbjct: 78 RNTPGGDPKAQACFPTSAANRSFQPRSLGGSLAGIAGPRPSPCQAHDCERGGGGRPSHRA 137
Query: 213 TAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRP 272
A Q RP + RGQ LP P AA G ASG+G + G AA
Sbjct: 138 AAVDQGRPRPRVPRGQ--PLPGLHPSAAAPGVGG-------RASGAG-GLLGEGAAG--- 184
Query: 273 AWAGLGPFWHLRRS---RRQDGLCCPGPR 298
G HLR S R CPGPR
Sbjct: 185 -----GGGAHLRHSCSTGRGSATRCPGPR 208
>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 44.3 bits (103), Expect = 2e-04
Identities = 74/255 (29%), Positives = 92/255 (36%), Gaps = 51/255 (20%)
Query: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGR--RSPLKAAQQDRGLPAWGV 118
+P+K P LP + R T RR + P + RG S +AA R
Sbjct: 48 FPKKPPLQSLP------ARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPR------- 94
Query: 119 WLLSRAEVRPRSALG-----SSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGC 173
S AE P SA+ S +R LG + R A E R+R P +
Sbjct: 95 ---SAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE-------RRRALPAAAGRKTKT 144
Query: 174 WLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQ-PEQRPHLSRGQWRLL 232
W + R AGAGP P P G SP +P P + P L
Sbjct: 145 WQSQNQSPRSARAPHTAGAGPG-PGPEPRGRRS-HSPLGFFSPSVPSRSP---------L 193
Query: 233 PRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGL 292
P R PER + SS RA + A R A GPF RR RR+
Sbjct: 194 PEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRR--AAHGPF--RRRERRK--- 246
Query: 293 CCPGPRPPSSTVASH 307
P PR SS +A H
Sbjct: 247 --PRPRSESSQLACH 259
>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
Length = 416
Score = 44.3 bits (103), Expect = 2e-04
Identities = 74/255 (29%), Positives = 92/255 (36%), Gaps = 51/255 (20%)
Query: 61 WPQKHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGR--RSPLKAAQQDRGLPAWGV 118
+P+K P LP + R T RR + P + RG S +AA R
Sbjct: 48 FPKKPPLQSLP------ARRRATPRRRARVRVTPPVGRGGLLSSWSRAAPTPR------- 94
Query: 119 WLLSRAEVRPRSALG-----SSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGC 173
S AE P SA+ S +R LG + R A E R+R P +
Sbjct: 95 ---SAAEAPPGSAIPAHLPRSVQRVLGARRTEPRSAGE-------RRRALPAAAGRKTKT 144
Query: 174 WLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQ-PEQRPHLSRGQWRLL 232
W + R AGAGP P P G SP +P P + P L
Sbjct: 145 WQSQNQSPRSARAPHTAGAGPG-PGPEPRGRRS-HSPLGFFSPSVPSRSP---------L 193
Query: 233 PRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGL 292
P R PER + SS RA + A R A GPF RR RR+
Sbjct: 194 PEREPERTDDRSRVESSARAGDQRRGREPTSRDHRAATRR--AAHGPF--RRRERRK--- 246
Query: 293 CCPGPRPPSSTVASH 307
P PR SS +A H
Sbjct: 247 --PRPRSESSQLACH 259
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 43.1 bits (100), Expect = 4e-04
Identities = 41/130 (31%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 183 RKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRG-QWRLLPRRRPERAA 241
RK GP L P P P PP+P + A PE +P G + R+L P R A
Sbjct: 108 RKRCFALGAVGPGLPTPPP---PPPPAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPA 164
Query: 242 GSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCPGPRPPS 301
SA PA + T A P RP + H+ + QD P RP
Sbjct: 165 PSAP--------PAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGE 216
Query: 302 STVASHCKKA 311
+T AS KA
Sbjct: 217 ATAASSEIKA 226
>gi|169167057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 320
Score = 42.7 bits (99), Expect = 5e-04
Identities = 55/186 (29%), Positives = 74/186 (39%), Gaps = 29/186 (15%)
Query: 101 RSPLKAAQQDRGLPA-WGVWLLSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTR 159
RSPL A + P WG +L + PR SS + G +R + + P R
Sbjct: 124 RSPLPAREDPPLSPQHWGGEIL---KFPPREKRASS----AEPGHWEKRQDKRLETHPCR 176
Query: 160 KRRTPGGGR---PEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGS-----PDPPSP- 210
P R P A C + R+ R AG G L+ P P+GS P P P
Sbjct: 177 APPLPPARRSPLPRAAC--AHPRRPRPLAGTTFCGGARVLSNPPPSGSGGDARPSPLVPR 234
Query: 211 --AATAAPQPEQRPHLSRGQWRLLPRRRPE---RAAGSAGSCSSRRALPASGSGAAMTGS 265
AT+A P++ P W PRRR + R + C+ R P +G AA S
Sbjct: 235 RCRATSASLPQETPFALSVVW--APRRRSQGDARGRRTGVPCAKR---PPAGWLAAAVTS 289
Query: 266 WAAPPR 271
W+ R
Sbjct: 290 WSPASR 295
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 42.7 bits (99), Expect = 5e-04
Identities = 53/195 (27%), Positives = 67/195 (34%), Gaps = 39/195 (20%)
Query: 63 QKHPYHLLPEL--PTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWL 120
Q P L P PT+ S P+RP R S H + S + G P +
Sbjct: 568 QSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPR----M 623
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGR--PEAGCW---- 174
+A+ PR+ S+ RG G EF P + TP R P G W
Sbjct: 624 SPKAQRHPRNHRVSAGRGSISSG------LEFVSHNPPSEAATPPVARTSPSGGTWSSVV 677
Query: 175 -----LENRRQRRRKAGAERAG---AGPTLTPP-------------LPAGSPDPPSPAAT 213
L + R R G +GP L P +PA SP P SPA+
Sbjct: 678 SGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPTEAVAMPIPAASPTPASPASN 737
Query: 214 AAPQPEQRPHLSRGQ 228
A P SR Q
Sbjct: 738 RAVTPSSEAKDSRLQ 752
Score = 31.6 bits (70), Expect = 1.3
Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 21/141 (14%)
Query: 145 RSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGS 204
RS AA + A T RR P W +R RR +G GA P P P+ +
Sbjct: 2 RSAAAAPRSPAVATESRRFAAARWPG---WRSLQRPARR-SGRGGGGAAPG---PYPSAA 54
Query: 205 PDPPS----PAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAG----------SCSSR 250
P PP P+ ++P S G R R G G +S
Sbjct: 55 PPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLLGLGGPPRPFVVLLLPLASP 114
Query: 251 RALPASGSGAAMTGSWAAPPR 271
A PA+ + A+ G+ A+PPR
Sbjct: 115 GAPPAAPTRASPLGARASPPR 135
>gi|78499633 phospholipase C, eta 2 [Homo sapiens]
Length = 1416
Score = 41.6 bits (96), Expect = 0.001
Identities = 60/228 (26%), Positives = 80/228 (35%), Gaps = 22/228 (9%)
Query: 70 LPELPTQISSSRPTRPRRCKSSSRPHL-ARGRRSPLKAAQQDRGL----------PAWGV 118
LP P S++RP P KS S P+L A G+R P+ Q R L P WG
Sbjct: 1180 LPPRPHSASAARPDLPPVTKSKSNPNLRATGQRPPIPDELQPRSLAPRMAGLPFRPPWGC 1239
Query: 119 WLLSRAEVRPRSALGSSRRGLGD-KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLEN 177
L + P +A S LGD + E R + PGG R +G +
Sbjct: 1240 LSLVGVQDCPVAAKSKS---LGDLTADDFAPSFEGGSRRLSHSLGLPGGTRRVSGPGVRR 1296
Query: 178 ---RRQRRRKAGAERAG--AGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLL 232
Q R ++AG PT P G P ++ + R + R
Sbjct: 1297 DTLTEQLRWLTVFQQAGDITSPTSLGPAGEGVAGGPGFVRRSSSRSHSRVRAIASRARQA 1356
Query: 233 PRRRPE-RAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGP 279
R+ + G G R P GS A P P+ LGP
Sbjct: 1357 QERQQRLQGLGRQGPPEEERGTPEGACSVGHEGSVDA-PAPSKGALGP 1403
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 41.2 bits (95), Expect = 0.002
Identities = 55/187 (29%), Positives = 65/187 (34%), Gaps = 33/187 (17%)
Query: 136 RRGLGDK--GPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAG 193
+R G K GP +RAAE +P G E L +RRR +E+ G
Sbjct: 185 KRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPSGEEG---LSPGGKRRRGCNSEQTGLP 241
Query: 194 PTL---TPPLPAGSPDPPSP------AATAAPQPEQRPHLSRGQWRLL------PRRR-- 236
P L PPLP P PP P AT+ P +P G W L P R+
Sbjct: 242 PGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKP----GLWSTLHGDAWGPERKGS 297
Query: 237 -PERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLCCP 295
P S PA A G P P G GP R + C P
Sbjct: 298 APPERQEQRHSLPHPYPYPAPAYTAHPPGHRLVPAAP--PGPGP----RPPGAESHGCLP 351
Query: 296 GPRPPSS 302
RPP S
Sbjct: 352 ATRPPGS 358
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 0.003
Identities = 49/184 (26%), Positives = 64/184 (34%), Gaps = 34/184 (18%)
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLEN--R 178
L R P SA G+ G R+R AA RP R GR +G
Sbjct: 54 LERGTFSPESAAGTEVSGAPHPDSRTRPAA-----RPPHPRTRSPPGRSGSGTTFSAVPP 108
Query: 179 RQRRRKAGAERAGAGPTLTPPLPAG--SPDPPSPAATAAPQPEQRPHL-----SRGQWRL 231
R + ++G+ A P P + SP P +P A A P + SRGQ
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSD 168
Query: 232 LPRRRPERAAGSAGSCSSRR--------------------ALPASGSGAAMTGSWAAPPR 271
RP RA G + RR + P SG+GA G+W +
Sbjct: 169 QVGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGG 228
Query: 272 PAWA 275
P A
Sbjct: 229 PGTA 232
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 0.003
Identities = 49/184 (26%), Positives = 64/184 (34%), Gaps = 34/184 (18%)
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLEN--R 178
L R P SA G+ G R+R AA RP R GR +G
Sbjct: 54 LERGTFSPESAAGTEVSGAPHPDSRTRPAA-----RPPHPRTRSPPGRSGSGTTFSAVPP 108
Query: 179 RQRRRKAGAERAGAGPTLTPPLPAG--SPDPPSPAATAAPQPEQRPHL-----SRGQWRL 231
R + ++G+ A P P + SP P +P A A P + SRGQ
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSD 168
Query: 232 LPRRRPERAAGSAGSCSSRR--------------------ALPASGSGAAMTGSWAAPPR 271
RP RA G + RR + P SG+GA G+W +
Sbjct: 169 QVGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGG 228
Query: 272 PAWA 275
P A
Sbjct: 229 PGTA 232
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 40.4 bits (93), Expect = 0.003
Identities = 49/184 (26%), Positives = 64/184 (34%), Gaps = 34/184 (18%)
Query: 121 LSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLEN--R 178
L R P SA G+ G R+R AA RP R GR +G
Sbjct: 54 LERGTFSPESAAGTEVSGAPHPDSRTRPAA-----RPPHPRTRSPPGRSGSGTTFSAVPP 108
Query: 179 RQRRRKAGAERAGAGPTLTPPLPAG--SPDPPSPAATAAPQPEQRPHL-----SRGQWRL 231
R + ++G+ A P P + SP P +P A A P + SRGQ
Sbjct: 109 RPSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRGQGSD 168
Query: 232 LPRRRPERAAGSAGSCSSRR--------------------ALPASGSGAAMTGSWAAPPR 271
RP RA G + RR + P SG+GA G+W +
Sbjct: 169 QVGARPSRAGGQPPPLTCRRCRAAPRRSARPFRRPGLPLKSRPGSGTGARSCGTWGSGGG 228
Query: 272 PAWA 275
P A
Sbjct: 229 PGTA 232
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 40.4 bits (93), Expect = 0.003
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 186 GAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHL---SRGQWRLLPRRRPERAAG 242
GA A PTL P P P P P AP+P P + + ++ G
Sbjct: 433 GAPEAPLSPTLNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGG 492
Query: 243 SAGSCSSRRALPASGSGAAMTGSWAAPPRP 272
+G+ S+ GS AA ++ APPRP
Sbjct: 493 GSGTAST------GGSQAASVITYTAPPRP 516
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 40.4 bits (93), Expect = 0.003
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 186 GAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHL---SRGQWRLLPRRRPERAAG 242
GA A PTL P P P P P AP+P P + + ++ G
Sbjct: 433 GAPEAPLSPTLNTPAPVAMPASPPPGPPPAPEPGPPPSVITFAHPAPSVIVHGGSSSGGG 492
Query: 243 SAGSCSSRRALPASGSGAAMTGSWAAPPRP 272
+G+ S+ GS AA ++ APPRP
Sbjct: 493 GSGTAST------GGSQAASVITYTAPPRP 516
>gi|46409372 G protein-coupled receptor 153 [Homo sapiens]
Length = 609
Score = 40.4 bits (93), Expect = 0.003
Identities = 51/157 (32%), Positives = 59/157 (37%), Gaps = 25/157 (15%)
Query: 122 SRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWL------ 175
SRA R +L S R D GPR R + P RR PG G A L
Sbjct: 450 SRARRRSAESLLSLRPSALDSGPRGAR-----DSPPGSPRRRPGPGPRSASASLLPDAFA 504
Query: 176 ------ENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQW 229
E + RR A A P P +P PPS +A +P P H G
Sbjct: 505 LTAFECEPQALRRPPGPFPAAPAAPDGAD--PGEAPTPPS-SAQRSPGPRPSAHSHAGSL 561
Query: 230 RL-LPRRRPE----RAAGSAGSCSSRRALPASGSGAA 261
R L E RAAG GS SS + P+ SG A
Sbjct: 562 RPGLSASWGEPGGLRAAGGGGSTSSFLSSPSESSGYA 598
>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
sapiens]
Length = 935
Score = 40.0 bits (92), Expect = 0.004
Identities = 55/188 (29%), Positives = 67/188 (35%), Gaps = 35/188 (18%)
Query: 64 KHPYHLLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWGVWLLSR 123
K P LP + T ++ T P +RP P +DR A
Sbjct: 719 KSPALKLPGMTTGATTQTATLPDGQTDRARPW-----SPPAPGESRDRARGA-------- 765
Query: 124 AEVRPRSALGSSRRG----LGDKGPRSRRAAEFTQARPTRKRRTPG------GGRPEAGC 173
+ P S G+ R G D R+RR AR R R T G GR AG
Sbjct: 766 GQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRARLTAGRRVRRESGRRRAGA 825
Query: 174 WLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLP 233
++ RR A R G P AG P PSPAA + +RG W L
Sbjct: 826 --TSQGAIRRAASRARKGESRRPLPANSAGRPALPSPAAARS---------ARGSWG-LR 873
Query: 234 RRRPERAA 241
RP RAA
Sbjct: 874 ASRPSRAA 881
Score = 33.9 bits (76), Expect = 0.25
Identities = 56/191 (29%), Positives = 63/191 (32%), Gaps = 70/191 (36%)
Query: 131 ALGSSR---RGLGDKGPRS---------RRAAEFTQARPTRKRRTPG--GGRPEAGCWLE 176
A G SR RG G GP S R A TQ R R + T GGR L
Sbjct: 754 APGESRDRARGAGQPGPGSGSGAERAGPERRARDTQTRTRRDKLTDSARGGRAR----LT 809
Query: 177 NRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRR 236
R+ RR++G RAGA S+G R
Sbjct: 810 AGRRVRRESGRRRAGA-------------------------------TSQGAIR------ 832
Query: 237 PERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGL---- 292
RAA A SRR LPA+ +G A P A W LR SR
Sbjct: 833 --RAASRARKGESRRPLPANSAGRP-----ALPSPAAARSARGSWGLRASRPSRAAPRGP 885
Query: 293 ----CCPGPRP 299
CP PRP
Sbjct: 886 PNFQRCPAPRP 896
>gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 618
Score = 40.0 bits (92), Expect = 0.004
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 42/161 (26%)
Query: 138 GLGDKGPRSRRAAEFTQ--------ARPTRKRRTPGGGRPEAGCWLENRRQRRRKAGAER 189
GLG + RR +Q ARP R R GG P CW R R
Sbjct: 2 GLGTRHNHGRRTGRLSQSAREGGGWARPARAARR--GGHPAHFCWSRPPVSRERD----- 54
Query: 190 AGAGPTLTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQ------------WRL--LPRR 235
P+ P+PA P PSP P P +RP +R Q RL LP +
Sbjct: 55 ---DPSAPRPVPA-LPSSPSP-----PPPVRRPSAAREQQGRQVPAGSLRDCRLASLPLQ 105
Query: 236 RPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAG 276
RP R G S A A G+G A RP AG
Sbjct: 106 RPFRGRGPHRSLGCDAAPAALGNGR----PGARSDRPCGAG 142
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 40.0 bits (92), Expect = 0.004
Identities = 67/270 (24%), Positives = 92/270 (34%), Gaps = 62/270 (22%)
Query: 69 LLPELPTQISSSRPTRPRRCKSSSRPHLARGRRSPLKAAQQDRGLPAWG----------V 118
L+P LP P PR +SS + + G+ S Q P +G
Sbjct: 598 LVPNLPKGALPPSPALPRPSRSSPGLYTSPGQDS----LQPTAVSPPYGGDISPVSPSRA 653
Query: 119 WLLSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAGC--WLE 176
W RA+ PR + + G+ A + ++ PT TPG RP + W+
Sbjct: 654 W-SPRAKQAPRPSFSTRNAGI--------EAQDRRESLPTSPPWTPGASRPPSSLDGWV- 703
Query: 177 NRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPA------ATAAPQPEQRPHLSRGQWR 230
G G G +++ P P P P SP+ + P+ E RP SR
Sbjct: 704 -------SPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRPETEARPP-SRQLQA 755
Query: 231 LLPR------RRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLR 284
LL R RR + SAG+ + R P A PP P P
Sbjct: 756 LLARNIINAARRKSASPRSAGAENPRPFSPPR----------APPPPPPPPPPPPRMRSP 805
Query: 285 RSRRQDGLCCPG------PRPPSSTVASHC 308
+ R PG PR P S C
Sbjct: 806 QPARPGSAAVPGAAFAPIPRSPLPAGPSSC 835
Score = 34.3 bits (77), Expect = 0.19
Identities = 61/239 (25%), Positives = 83/239 (34%), Gaps = 36/239 (15%)
Query: 56 YSSHQWPQKHPYHLLPELPTQISSSRPTRP--RRCKSSSRPHLARGRRSPLKAAQQDRGL 113
Y+S P + P IS P+R R K + RP + R + ++A + L
Sbjct: 624 YTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFST-RNAGIEAQDRRESL 682
Query: 114 PAWGVWLLSRAEVRPRSAL------GSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGG 167
P W + RP S+L G G G P+ R+
Sbjct: 683 PTSPPWTPGAS--RPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPL 740
Query: 168 RPEAGCWLENRRQR-----------RRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAP 216
RPE +R+ + RRK+ + R+ P P +P PP P P
Sbjct: 741 RPETEARPPSRQLQALLARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPP----PP 796
Query: 217 QPEQRPHLSRGQWRLLPRRRPERAA--GSAGSCSSRRALPASGSGAAMTGS-WAAPPRP 272
P R R RP AA G+A + R LPA S S APPRP
Sbjct: 797 PPPPR-------MRSPQPARPGSAAVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRP 848
>gi|193083122 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 201 PAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRR---ALPASG 257
PAG P PP+PA P P P LP AG++ S SS R A AS
Sbjct: 11 PAGPPPPPAPALVGLPPPPPSP-----PGFTLPPLGGSLGAGTSTSRSSERTPGAATASA 65
Query: 258 SGAAMTGSWAAPPRP 272
SGAA G+ P P
Sbjct: 66 SGAAEDGACGCLPNP 80
>gi|193083120 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 201 PAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRR---ALPASG 257
PAG P PP+PA P P P LP AG++ S SS R A AS
Sbjct: 11 PAGPPPPPAPALVGLPPPPPSP-----PGFTLPPLGGSLGAGTSTSRSSERTPGAATASA 65
Query: 258 SGAAMTGSWAAPPRP 272
SGAA G+ P P
Sbjct: 66 SGAAEDGACGCLPNP 80
>gi|5174723 translocase of outer mitochondrial membrane 40 [Homo
sapiens]
Length = 361
Score = 40.0 bits (92), Expect = 0.004
Identities = 29/75 (38%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 201 PAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRR---ALPASG 257
PAG P PP+PA P P P LP AG++ S SS R A AS
Sbjct: 11 PAGPPPPPAPALVGLPPPPPSP-----PGFTLPPLGGSLGAGTSTSRSSERTPGAATASA 65
Query: 258 SGAAMTGSWAAPPRP 272
SGAA G+ P P
Sbjct: 66 SGAAEDGACGCLPNP 80
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 39.7 bits (91), Expect = 0.005
Identities = 49/154 (31%), Positives = 62/154 (40%), Gaps = 21/154 (13%)
Query: 138 GLGDKGPRSRRAAEFTQAR--PTRKRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPT 195
GL +G S A + Q R PTR+ R GG RR R GA A GPT
Sbjct: 147 GLPPRGKASGPARDSAQQRRRPTRRPRGTRGGA---------RRPGVRGQGA--AAVGPT 195
Query: 196 LTPPLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPA 255
P P G+P +P + PH G W P R P AG+ + R
Sbjct: 196 --GPRPTGAPPSRRTPPPGPRRPLRSPHSGSG-W--TPARPPSPPAGAPEAL--RPPAST 248
Query: 256 SGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQ 289
+ + A +T S++A AWAG P H R Q
Sbjct: 249 TRAPAPLTLSFSARGL-AWAGESPASHQSERRWQ 281
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 39.7 bits (91), Expect = 0.005
Identities = 67/226 (29%), Positives = 76/226 (33%), Gaps = 39/226 (17%)
Query: 63 QKHPYHLLPELPTQISS-SRPTRP-----RRCKSSSRPHLARGRRSPLKAAQQDRGLPAW 116
QK Y LP +S S RP R S RP RGR PA
Sbjct: 258 QKASYLRPKNLPRLLSMPSAAARPCGAALPRSGFSGRP---RGRGGAAAGRGSRGEHPAC 314
Query: 117 GVWLLSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPGGGRPEAG---- 172
GV L +P S + R SR A+ A +RRT G A
Sbjct: 315 GVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPAR 374
Query: 173 CWLEN-RRQR--------------RRKAGAERAGAGPTLTPPL--PAGSPDPPSPAATAA 215
W RRQR RR A +GAGP P P G+P PP T
Sbjct: 375 VWSPPPRRQRPRRLPRASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPPHARPTGR 434
Query: 216 PQ-PEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGSGA 260
Q PE P RG P + AGS + R P GS A
Sbjct: 435 RQDPEPGPRAPRGG--------PASSGWHAGSAAGRGWDPGGGSRA 472
Score = 31.6 bits (70), Expect = 1.3
Identities = 50/193 (25%), Positives = 63/193 (32%), Gaps = 48/193 (24%)
Query: 127 RPRSALGSSRRGLGDKGPRSRRAAEFTQARPTRKRRTPG-GGRPEAGCWLENRRQRRRKA 185
RPR G + G G +G + + T RP AG +R + +R
Sbjct: 294 RPRGR-GGAAAGRGSRGEHPACGVGLARGTAPQPASTWALAARPRAGGTWTSRFEAQRGC 352
Query: 186 GAE------RAGAGPTLTPPLPAGSPDPPS------PAATAAPQPEQRPHLSRGQWRLLP 233
+ R GAG + P SP P P A+ +P++RP P
Sbjct: 353 AHQDGQRRTRDGAGNHASEPARVWSPPPRRQRPRRLPRASLQEEPKRRP----------P 402
Query: 234 RRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPPRPAWAGLGPFWHLRRSRRQDGLC 293
RP A PA AA G PP G RRQD
Sbjct: 403 CARPSGAG------------PAREGPAAWPGGAPTPPHARPTG----------RRQDPE- 439
Query: 294 CPGPRPPSSTVAS 306
PGPR P AS
Sbjct: 440 -PGPRAPRGGPAS 451
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,619,569
Number of Sequences: 37866
Number of extensions: 1208004
Number of successful extensions: 13050
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 1028
Number of HSP's that attempted gapping in prelim test: 10093
Number of HSP's gapped (non-prelim): 3352
length of query: 384
length of database: 18,247,518
effective HSP length: 104
effective length of query: 280
effective length of database: 14,309,454
effective search space: 4006647120
effective search space used: 4006647120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.