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Search of human proteins with 169211959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169211959 PREDICTED: hypothetical protein [Homo sapiens]
(115 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169211554 PREDICTED: hypothetical protein [Homo sapiens] 236 3e-63
gi|169211959 PREDICTED: hypothetical protein [Homo sapiens] 236 3e-63
gi|169211178 PREDICTED: hypothetical protein [Homo sapiens] 232 4e-62
gi|169206224 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|169206527 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|113424187 PREDICTED: hypothetical protein [Homo sapiens] 35 0.013
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 34 0.022
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 34 0.022
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 34 0.028
gi|239754597 PREDICTED: hypothetical protein [Homo sapiens] 33 0.037
gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo ... 33 0.037
gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo ... 33 0.037
gi|239508884 PREDICTED: hypothetical protein [Homo sapiens] 33 0.037
gi|7705558 inositol-3-phosphate synthase 1 [Homo sapiens] 33 0.037
gi|62955044 F-box protein 42 [Homo sapiens] 33 0.049
gi|241982780 programmed cell death 6 interacting protein isoform... 33 0.063
gi|22027538 programmed cell death 6 interacting protein isoform ... 33 0.063
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens] 33 0.063
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens] 32 0.083
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens] 32 0.083
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 32 0.083
gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo sapiens] 32 0.083
gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo sapiens] 32 0.083
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 32 0.083
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 32 0.11
gi|50233787 nuclear protein in testis [Homo sapiens] 32 0.14
gi|239749936 PREDICTED: similar to single Ig IL-1R-related molec... 31 0.18
gi|239757256 PREDICTED: hypothetical protein XP_002345223 [Homo ... 31 0.24
gi|239751761 PREDICTED: hypothetical protein [Homo sapiens] 31 0.24
gi|239746261 PREDICTED: hypothetical protein XP_002343718 [Homo ... 31 0.24
>gi|169211554 PREDICTED: hypothetical protein [Homo sapiens]
Length = 115
Score = 236 bits (602), Expect = 3e-63
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP
Sbjct: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
Query: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS
Sbjct: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
>gi|169211959 PREDICTED: hypothetical protein [Homo sapiens]
Length = 115
Score = 236 bits (602), Expect = 3e-63
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP
Sbjct: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
Query: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS
Sbjct: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
>gi|169211178 PREDICTED: hypothetical protein [Homo sapiens]
Length = 115
Score = 232 bits (592), Expect = 4e-62
Identities = 114/115 (99%), Positives = 114/115 (99%)
Query: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACS DPFRKELPP
Sbjct: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
Query: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS
Sbjct: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
>gi|169206224 PREDICTED: hypothetical protein [Homo sapiens]
Length = 318
Score = 35.0 bits (79), Expect = 0.013
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)
Query: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
+NRS S + GN L KR W + + G P P G AC E+
Sbjct: 213 INRSTSYMQSHGNCLGKRKWQRLGPL--------GQPGP-----VGCAC-------EVSS 252
Query: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPL--PLLADLT 99
A A R PC S P A G + L PL A LT
Sbjct: 253 SGAGPAAAVDRGGPCTSAPAAPGNLSPDSRLLQNPLPAHLT 293
>gi|169206527 PREDICTED: hypothetical protein [Homo sapiens]
Length = 318
Score = 35.0 bits (79), Expect = 0.013
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)
Query: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
+NRS S + GN L KR W + + G P P G AC E+
Sbjct: 213 INRSTSYMQSHGNCLGKRKWQRLGPL--------GQPGP-----VGCAC-------EVSS 252
Query: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPL--PLLADLT 99
A A R PC S P A G + L PL A LT
Sbjct: 253 SGAGPAAAVDRGGPCTSAPAAPGNLSPDSRLLQNPLPAHLT 293
>gi|113424187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 268
Score = 35.0 bits (79), Expect = 0.013
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)
Query: 1 MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60
+NRS S + GN L KR W + + G P P G AC E+
Sbjct: 163 INRSTSYMQSHGNCLGKRKWQRLGPL--------GQPGP-----VGCAC-------EVSS 202
Query: 61 LSAATDTAPSRAAPCPSTPGAAGRANNKEPPL--PLLADLT 99
A A R PC S P A G + L PL A LT
Sbjct: 203 SGAGPAAAVDRGGPCTSAPAAPGNLSPDSRLLQNPLPAHLT 243
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 25 AVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPPLSAATDTAPSRAAPCPSTPGAAGR 84
A+++ ++R E PA + G + SP P R++ PP AT S S AAGR
Sbjct: 626 ALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSA-AAAGR 684
Query: 85 ANNKEPP 91
A + PP
Sbjct: 685 APSPPPP 691
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 34.3 bits (77), Expect = 0.022
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 25 AVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPPLSAATDTAPSRAAPCPSTPGAAGR 84
A+++ ++R E PA + G + SP P R++ PP AT S S AAGR
Sbjct: 621 ALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSA-AAAGR 679
Query: 85 ANNKEPP 91
A + PP
Sbjct: 680 APSPPPP 686
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 33.9 bits (76), Expect = 0.028
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 38 APHTVSVTGAACSP-DPFRKELPPLSAATDTAPSRAAPCPS-TPGAAGRA 85
+P T+ V G SP P+ + PP AAT TAP +P PS +PG G A
Sbjct: 972 SPPTLRVHGDTGSPRKPWPERRPPRPAATRTAPPTPSPGPSASPGPPGPA 1021
>gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 12 GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRK---ELPPLSAATDTA 68
G Q R +SA +S G P+P + +C FR + PP + AT +
Sbjct: 55 GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114
Query: 69 PSRAAPCPSTPGAAGRANNKEP 90
P+ P + P R EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136
>gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo
sapiens]
Length = 170
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 12 GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRK---ELPPLSAATDTA 68
G Q R +SA +S G P+P + +C FR + PP + AT +
Sbjct: 55 GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114
Query: 69 PSRAAPCPSTPGAAGRANNKEP 90
P+ P + P R EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136
>gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo
sapiens]
Length = 170
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 12 GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRK---ELPPLSAATDTA 68
G Q R +SA +S G P+P + +C FR + PP + AT +
Sbjct: 55 GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114
Query: 69 PSRAAPCPSTPGAAGRANNKEP 90
P+ P + P R EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136
>gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 33.5 bits (75), Expect = 0.037
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 12 GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRK---ELPPLSAATDTA 68
G Q R +SA +S G P+P + +C FR + PP + AT +
Sbjct: 55 GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114
Query: 69 PSRAAPCPSTPGAAGRANNKEP 90
P+ P + P R EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136
>gi|7705558 inositol-3-phosphate synthase 1 [Homo sapiens]
Length = 558
Score = 33.5 bits (75), Expect = 0.037
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 12 GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPPLSAATDTAPSR 71
G+ + + Q+S + +++ GLP + + + P P K + P+ AAT ++
Sbjct: 472 GSPVVNALFRQRSCIENILRACVGLPPQNHMLLEHKMERPGPSLKRVGPV-AATYPMLNK 530
Query: 72 AAPCPS-TPGAAGRAN---NKEPPLP 93
P P+ T G G AN +EPP+P
Sbjct: 531 KGPVPAATNGCTGDANGHLQEEPPMP 556
>gi|62955044 F-box protein 42 [Homo sapiens]
Length = 717
Score = 33.1 bits (74), Expect = 0.049
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 39 PHTVSVTGAACSPDPFRKELPPLSAATDTAPSRAA-------PCPSTPGAAGRANNKEPP 91
PH S A SP R+ L + A + PS +A P +PG+ ++ + P
Sbjct: 541 PHVASALAGAVSPGALRRSLEAIKAMSSKGPSASAALSPPLGSSPGSPGSQSLSSGETVP 600
Query: 92 LP 93
+P
Sbjct: 601 IP 602
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 32.7 bits (73), Expect = 0.063
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 37 PAPHTVSVTGAACSPDPFRKELPPLSAATDTAPS-----RAAPCPS-TPGAAGRANNKEP 90
PAP T+ T P LP A + TAPS AAP PS TPG+A + P
Sbjct: 747 PAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGP 806
Query: 91 PLP 93
P P
Sbjct: 807 PYP 809
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 32.7 bits (73), Expect = 0.063
Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 37 PAPHTVSVTGAACSPDPFRKELPPLSAATDTAPS-----RAAPCPS-TPGAAGRANNKEP 90
PAP T+ T P LP A + TAPS AAP PS TPG+A + P
Sbjct: 742 PAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGP 801
Query: 91 PLP 93
P P
Sbjct: 802 PYP 804
>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
Length = 322
Score = 32.7 bits (73), Expect = 0.063
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 59 PPLSAATDTAPSRAAPCPS-TPGAAGRANNKEPPLPLLADL 98
PP + AT +A SR P P+ P A A+ PPLP+L L
Sbjct: 183 PPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRL 223
>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
Length = 733
Score = 32.3 bits (72), Expect = 0.083
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 56 KELPPLSAATDT--APSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKT 113
K+ PP SAA + A P P +P +AG A KEPPL L +L + F L++
Sbjct: 246 KKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLAL---PSLPPLPFQKLEEAAP 302
Query: 114 PS 115
PS
Sbjct: 303 PS 304
>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
Length = 714
Score = 32.3 bits (72), Expect = 0.083
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 56 KELPPLSAATDT--APSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKT 113
K+ PP SAA + A P P +P +AG A KEPPL L +L + F L++
Sbjct: 227 KKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLAL---PSLPPLPFQKLEEAAP 283
Query: 114 PS 115
PS
Sbjct: 284 PS 285
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 32.3 bits (72), Expect = 0.083
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 23 KSAVFSVISRAEGLPA--PHTVSVTGAACSPDPFRKELPPLSAATDTAPSRAAPCPSTPG 80
+ A FSV S P+ P VS A+ S + PP S AP AP S PG
Sbjct: 791 EEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPG 850
Query: 81 AAGRANNKEP 90
+ KEP
Sbjct: 851 HVAKLPQKEP 860
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 36 LPAPHTVSVT----GAACSPDPFRKELPPLSAATDTAPSRAAPCPSTPGAAGRANNKEPP 91
LP P T + A C P+P +P LS P R+ +P + + + P
Sbjct: 533 LPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPT 592
Query: 92 LP 93
LP
Sbjct: 593 LP 594
>gi|56549129 transmembrane anchor protein 1 isoform 3 [Homo
sapiens]
Length = 170
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 46 GAACSPDPFR---KELPPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLP 93
GAA SP+P R + PP A APSR PC P AA A +EP P
Sbjct: 30 GAAASPEPARAPPEPAPPAEATGAPAPSR--PCAPEP-AASPAGPEEPGEP 77
>gi|56549133 transmembrane anchor protein 1 isoform 2 [Homo
sapiens]
Length = 177
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 46 GAACSPDPFR---KELPPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLP 93
GAA SP+P R + PP A APSR PC P AA A +EP P
Sbjct: 30 GAAASPEPARAPPEPAPPAEATGAPAPSR--PCAPEP-AASPAGPEEPGEP 77
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo
sapiens]
Length = 204
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 46 GAACSPDPFR---KELPPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLP 93
GAA SP+P R + PP A APSR PC P AA A +EP P
Sbjct: 30 GAAASPEPARAPPEPAPPAEATGAPAPSR--PCAPEP-AASPAGPEEPGEP 77
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 32.0 bits (71), Expect = 0.11
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 24 SAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPPLSAATDTAPSRAAPCPSTPGAAG 83
S + +S +E LP T S++ + +P R P + A T +P A+P S+P +
Sbjct: 1094 SGLHHSLSSSESLPGSPTHSLSPSPTTP--CRSPAPDVPADTTASPPSASPSSSSPASPA 1151
Query: 84 RANNKEP 90
A + P
Sbjct: 1152 AAGHTRP 1158
>gi|50233787 nuclear protein in testis [Homo sapiens]
Length = 1132
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/47 (38%), Positives = 18/47 (38%)
Query: 33 AEGLPAPHTVSVTGAACSPDPFRKELPPLSAATDTAPSRAAPCPSTP 79
A LP P AA SP P LPP S D P P P P
Sbjct: 6 ASALPGPDMSMKPSAALSPSPALPFLPPTSDPPDHPPREPPPQPIMP 52
>gi|239749936 PREDICTED: similar to single Ig IL-1R-related molecule
[Homo sapiens]
Length = 304
Score = 31.2 bits (69), Expect = 0.18
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 46 GAACSPDPFRKELPPLSAATDTAPSRAA---PCPSTPGAAGRANNK---EPPLPLLADLT 99
G A P P R+ LP SAA+ + R A P PGA+ R+ + EP LL +L+
Sbjct: 54 GLATGPRPVRQRLPGSSAASSASLGRRAGRWAAPPPPGASPRSWQQVSGEPSADLLVNLS 113
>gi|239757256 PREDICTED: hypothetical protein XP_002345223 [Homo
sapiens]
Length = 113
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 59 PPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQ 101
PP SA+ D++P P PS +A A K P P ++ L L+
Sbjct: 66 PPGSASLDSSPGTELPVPSLASSAPLAPTKPHPRPRVSRLRLR 108
>gi|239751761 PREDICTED: hypothetical protein [Homo sapiens]
Length = 113
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 59 PPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQ 101
PP SA+ D++P P PS +A A K P P ++ L L+
Sbjct: 66 PPGSASLDSSPGTELPVPSLASSAPLAPTKPHPRPRVSRLRLR 108
>gi|239746261 PREDICTED: hypothetical protein XP_002343718 [Homo
sapiens]
Length = 113
Score = 30.8 bits (68), Expect = 0.24
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 59 PPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQ 101
PP SA+ D++P P PS +A A K P P ++ L L+
Sbjct: 66 PPGSASLDSSPGTELPVPSLASSAPLAPTKPHPRPRVSRLRLR 108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,137,451
Number of Sequences: 37866
Number of extensions: 270858
Number of successful extensions: 2444
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 2110
Number of HSP's gapped (non-prelim): 528
length of query: 115
length of database: 18,247,518
effective HSP length: 85
effective length of query: 30
effective length of database: 15,028,908
effective search space: 450867240
effective search space used: 450867240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.