Guide to the Human Genome
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Search of human proteins with 169211534

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169211534 PREDICTED: hypothetical protein [Homo sapiens]
         (205 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169211534 PREDICTED: hypothetical protein [Homo sapiens]           440   e-124
gi|169218016 PREDICTED: hypothetical protein [Homo sapiens]           440   e-124
gi|169210726 PREDICTED: hypothetical protein [Homo sapiens]           440   e-124
gi|146219843 Snf2-related CBP activator protein [Homo sapiens]         40   0.001
gi|151301154 mucin 6, gastric [Homo sapiens]                           39   0.003
gi|163965366 nascent polypeptide-associated complex alpha subuni...    37   0.012
gi|50345997 E1A binding protein p300 [Homo sapiens]                    37   0.015
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    37   0.015
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]           37   0.015
gi|24497609 nucleoporin 62kDa [Homo sapiens]                           36   0.026
gi|24497607 nucleoporin 62kDa [Homo sapiens]                           36   0.026
gi|24497605 nucleoporin 62kDa [Homo sapiens]                           36   0.026
gi|24497603 nucleoporin 62kDa [Homo sapiens]                           36   0.026
gi|223941923 OTU domain containing 1 [Homo sapiens]                    35   0.034
gi|39812378 RAN binding protein 9 [Homo sapiens]                       35   0.045
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             35   0.058
gi|158262031 hypothetical protein LOC221545 isoform 1 [Homo sapi...    35   0.058
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]    35   0.058
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.076
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    34   0.076
gi|13375926 vacuolar protein sorting 37B [Homo sapiens]                34   0.076
gi|33186895 selenoprotein V [Homo sapiens]                             34   0.076
gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]                34   0.076
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]            34   0.099
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]            34   0.099
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]             34   0.099
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [...    34   0.099
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          34   0.099
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          34   0.099
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          34   0.099

>gi|169211534 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 205

 Score =  440 bits (1132), Expect = e-124
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI 60
           MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI
Sbjct: 1   MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI 60

Query: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120
           PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL
Sbjct: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120

Query: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC 180
           HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC
Sbjct: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC 180

Query: 181 LLPTSSMLTSPGTGGCIRARILEPA 205
           LLPTSSMLTSPGTGGCIRARILEPA
Sbjct: 181 LLPTSSMLTSPGTGGCIRARILEPA 205


>gi|169218016 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 205

 Score =  440 bits (1132), Expect = e-124
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI 60
           MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI
Sbjct: 1   MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI 60

Query: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120
           PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL
Sbjct: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120

Query: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC 180
           HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC
Sbjct: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC 180

Query: 181 LLPTSSMLTSPGTGGCIRARILEPA 205
           LLPTSSMLTSPGTGGCIRARILEPA
Sbjct: 181 LLPTSSMLTSPGTGGCIRARILEPA 205


>gi|169210726 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 205

 Score =  440 bits (1132), Expect = e-124
 Identities = 205/205 (100%), Positives = 205/205 (100%)

Query: 1   MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI 60
           MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI
Sbjct: 1   MREPLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREI 60

Query: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120
           PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL
Sbjct: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120

Query: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC 180
           HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC
Sbjct: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVC 180

Query: 181 LLPTSSMLTSPGTGGCIRARILEPA 205
           LLPTSSMLTSPGTGGCIRARILEPA
Sbjct: 181 LLPTSSMLTSPGTGGCIRARILEPA 205


>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
          Length = 3230

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 41/158 (25%), Positives = 60/158 (37%), Gaps = 14/158 (8%)

Query: 38   KSKLPVLPDPRLICRYMCSCREIPGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAP 97
            K+K P  P  R+  R   +  E  G   TPV  +   + T     +PP  S   + +  P
Sbjct: 2384 KAKAPERPGTRVSERLRGARAETQGANHTPVISAHQTRSTT----TPPRCSPARERVPRP 2439

Query: 98   FQGSWPRPCHALSGPRAMVPNQLHPGTPCPAHVPHSCTMPAGTCP--LFTGAPAAAEAGL 155
                 P P  A +   A+VP       P  A VP S   P    P  +    P  ++   
Sbjct: 2440 APRPRPTPASAPAAIPALVP------VPVSAPVPISAPNPITILPVHILPSPPPPSQIPP 2493

Query: 156  NPGPALRAPTSCS--SSTWPKPFMTVCLLPTSSMLTSP 191
               PA   P +C+   +  P P  T  + P+S +L  P
Sbjct: 2494 CSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGP 2531



 Score = 32.3 bits (72), Expect = 0.29
 Identities = 41/151 (27%), Positives = 58/151 (38%), Gaps = 28/151 (18%)

Query: 64   ISTPVPHSAGPQVTRFHSPSP-PHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHP 122
            ++TP+   A PQ T   +PSP P ++ L   + AP  G+ P    + +    M P+   P
Sbjct: 1583 LATPLAPMAAPQ-TAILAPSPAPPLAPLP--VLAPSPGAAPVLASSQTPVPVMAPSST-P 1638

Query: 123  GTPC----------------------PAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPA 160
            GT                        PA VP     PA T  L   APA A       P+
Sbjct: 1639 GTSLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQTLAL-APALAPTLGGSSPS 1697

Query: 161  LRAPTSCSSSTWPKPFMTVCLLPTSSMLTSP 191
                    +   P P  T+ L P SS++ +P
Sbjct: 1698 QTLSLGTGNPQGPFPTQTLSLTPASSLVPTP 1728


>gi|151301154 mucin 6, gastric [Homo sapiens]
          Length = 2439

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 39/136 (28%), Positives = 52/136 (38%), Gaps = 12/136 (8%)

Query: 66   TPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTP 125
            TPV H+     +R   P PP  +    T  +PF  + P    +        P   HP T 
Sbjct: 1556 TPVAHTNSATSSR---PPPPFTTHSPPTGSSPFSSTGPMTATSFK-TTTTYPTPSHPQTT 1611

Query: 126  CPAHVP----HSCTMPAGTCPLFTGAPAAAEAGLN--PGPALRAPTS--CSSSTWPKPFM 177
             P HVP       T    T    T A  A  A ++  P   +  PT+   + ST   P M
Sbjct: 1612 LPTHVPPFSTSLVTPSTHTVITPTHAQMATSASIHSMPTGTIPPPTTLKATGSTHTAPTM 1671

Query: 178  TVCLLPTSSMLTSPGT 193
            T+    TS  L+S  T
Sbjct: 1672 TLTTSGTSQALSSLNT 1687



 Score = 33.1 bits (74), Expect = 0.17
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 17/138 (12%)

Query: 59   EIPGVISTPVPHSAGPQVTRFHSPSPPHISELSQ---TLHAPFQGSWPRPCHALSGPRAM 115
            ++P + S   P S   Q++   SPSP   S +S    + H+  Q S P    + S   A 
Sbjct: 2110 QLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTSSPSVGTSSSFVSAP 2169

Query: 116  VPNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRA--PTSCSSSTWP 173
            V +         +   H  T      PLF  +PAA+         +RA  P + SS    
Sbjct: 2170 VHSTTLSSGSHSSLSTHPTTASVSASPLFPSSPAAS-------TTIRATLPHTISS---- 2218

Query: 174  KPFMTVCLLPTSSMLTSP 191
             PF    LLP S++  SP
Sbjct: 2219 -PFTLSALLPISTVTVSP 2235



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 12/139 (8%)

Query: 66   TPVPHSAG-PQVT-----RFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQ 119
            TP P S G P +T        S S    ++ S +LH+    S   P    +   ++ PN 
Sbjct: 1715 TPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHS-HTSSTHHPEVTSTSTTSITPNH 1773

Query: 120  LHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTV 179
               GT  P     S T      P  T +P      ++    + A +  +++T+P P    
Sbjct: 1774 TSTGTRTPVAHTTSATSSRLPTPFTTHSPPTGTTPISSTGPVTATSFQTTTTYPTPSHPH 1833

Query: 180  CLLPT-----SSMLTSPGT 193
              LPT     S+ L +P T
Sbjct: 1834 TTLPTHVPSFSTSLVTPST 1852



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 77   TRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCPAHVP 131
            T + +P  PH +    T  +P   + P    +        P   HP T  P HVP
Sbjct: 1395 TEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTY-PTPSHPETTLPTHVP 1448



 Score = 28.5 bits (62), Expect = 4.2
 Identities = 35/141 (24%), Positives = 50/141 (35%), Gaps = 13/141 (9%)

Query: 56  SCREIPGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAM 115
           +C  I G +S P      PQ+      +P      SQ+    F  +    C  L+   A 
Sbjct: 743 TCHCINGRLSCP----QRPQMFLASCQAPKTFKSCSQSSENKFGAACAPTCQMLATGVAC 798

Query: 116 VPNQLHPGTPCPAHVPHSC---TMPAGTCPL-FTGAPAAAEAGLNPGPALRAPTSCSSST 171
           VP +  PG  C   +  +     +P   CP  F+G      A L+         SCS   
Sbjct: 799 VPTKCEPGCVCAEGLYENADGQCVPPEECPCEFSGVSYPGGAELHTD---CRTCSCSRGR 855

Query: 172 WPKPFMTVCLLPTSSMLTSPG 192
           W     T C  P++  L   G
Sbjct: 856 WACQQGTHC--PSTCTLYGEG 874



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 65   STPVPHSAGPQV--TRFHSPSPPHISELSQTLHAPFQ-GSWPRPCHALSGPRAMVPNQLH 121
            +T   H+A P    T   S SP   S    +   P+   S   P    +    + P    
Sbjct: 1885 ATGSTHTAPPMTPTTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTS 1944

Query: 122  PGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCL 181
             GT  P     S +      P  T +P    +  +    + A +  +++T+P P      
Sbjct: 1945 TGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTT 2004

Query: 182  LPT-----SSMLTSPGT 193
            LPT     S+ L +P T
Sbjct: 2005 LPTHVPPFSTSLVTPST 2021


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 38/129 (29%), Positives = 49/129 (37%), Gaps = 10/129 (7%)

Query: 65   STPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQG-SWPRPCHALSGPRAMVPNQLH-P 122
            +TP P       +   +P+PP     + T  +P  G + P P  A + P A  P+    P
Sbjct: 923  ATPAPKGIPASPSPKGAPTPP-----AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGP 977

Query: 123  GTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLL 182
             TP P   P   T PA T P   G PA       P P    P S   S    PF      
Sbjct: 978  ATPSPKGAP---TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGAST 1034

Query: 183  PTSSMLTSP 191
            P ++   SP
Sbjct: 1035 PPAATPPSP 1043



 Score = 34.3 bits (77), Expect = 0.076
 Identities = 31/106 (29%), Positives = 39/106 (36%), Gaps = 21/106 (19%)

Query: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120
           P V++ P P   GP      +P+P     LS T       S P+   A   P+ +     
Sbjct: 888 PSVVNLPFPKE-GPA-----TPAPKQAPALSMT------SSSPKKARATPAPKGI----- 930

Query: 121 HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTS 166
            P +P P   P   T PA T P   G PA       P P    P S
Sbjct: 931 -PASPSPKGAP---TPPAATPPSPKGGPATPSPKWAPTPPAATPPS 972



 Score = 29.3 bits (64), Expect = 2.4
 Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 6/107 (5%)

Query: 61   PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120
            P   + P P       +   +P+PP ++  S         + P P  A + P A  P+  
Sbjct: 988  PPAATPPSPKGGPATPSPKGAPTPPAVTPPSPK---GSPAATPFPKGASTPPAATPPSP- 1043

Query: 121  HPGTPCPAHVPHSC-TMPAGTCPLFTGAPAAAEAGLNPGPALRAPTS 166
              G+P    +P    T PA T P   G PA       P P    P S
Sbjct: 1044 -KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPS 1089



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 35/136 (25%), Positives = 47/136 (34%), Gaps = 9/136 (6%)

Query: 61   PGVISTPVPHSAGPQVTRF-HSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQ 119
            P  ++ P P  + P  T F    S P  +       +P   + P P  A + P A +P+ 
Sbjct: 1011 PPAVTPPSPKGS-PAATPFPKGASTPPAATPPSPKGSP--AATPLPKGAPTTPAATLPSP 1067

Query: 120  LHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTV 179
               G P    +  + T PA T P   G PA       P P    P S        P    
Sbjct: 1068 --KGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGA 1125

Query: 180  CLLPTSSMLTSPGTGG 195
               PT+   T P   G
Sbjct: 1126 ---PTTPAATPPSPKG 1138



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 30/116 (25%), Positives = 39/116 (33%), Gaps = 7/116 (6%)

Query: 61   PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQL 120
            P V++ P P           +P+PP     + T  +P       P      P A+ P   
Sbjct: 1289 PAVVTPPSPKGGPATSPPKGAPTPP-----AATPPSPKGSPGTPPPKGAPTPPAVTPPS- 1342

Query: 121  HPGTPC-PAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKP 175
              GTP  PA  P S   P          P AA      GPA+  P+       P P
Sbjct: 1343 PKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP 1398



 Score = 27.3 bits (59), Expect = 9.3
 Identities = 27/94 (28%), Positives = 32/94 (34%), Gaps = 7/94 (7%)

Query: 103  PRPCHALSGPRAMVPNQLHP-GTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPAL 161
            P P  A + P A  P+      TP P   P   T PA T P   G PA       P P  
Sbjct: 1212 PSPKGAPTTPAATPPSPKGGLATPSPKGAP---TTPAATPPSPKGGPATPPPKGAPTPPA 1268

Query: 162  RAPTSCSSSTWPKPFMTVCLLPTSSMLTSPGTGG 195
              P S        P       P  +++T P   G
Sbjct: 1269 ATPPSLKGGLATPPHKGA---PNPAVVTPPSPKG 1299


>gi|50345997 E1A binding protein p300 [Homo sapiens]
          Length = 2414

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 43/169 (25%), Positives = 59/169 (34%), Gaps = 35/169 (20%)

Query: 4   PLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKS-KLPVLPDPRLICRYMCSCREIPG 62
           PL P    A +S+ +     C + +     G +G     P LP P L   +  S   +P 
Sbjct: 781 PLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPAL---HQNSPSPVPS 837

Query: 63  VISTPVPHSAGPQVTRFHSPS---------PPHI--SELSQTLHAPFQGSWPRPCHALSG 111
              TP PH   P +     P+         PP +     SQ LH P       P    + 
Sbjct: 838 --RTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQALHPP-------PRQTPTP 888

Query: 112 PRAMVPNQLHPGTPC------PAHVPHS-----CTMPAGTCPLFTGAPA 149
           P   +P Q+ P  P       P   P S      ++P  T PL    PA
Sbjct: 889 PTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPA 937


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 41/139 (29%), Positives = 54/139 (38%), Gaps = 26/139 (18%)

Query: 67  PVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPG--- 123
           P P +A   +     PSPP  + L     AP   S P     L  P A  P+Q  P    
Sbjct: 318 PPPDNAATPLPATLPPSPPLATPLPL---APPSPSAPPSLQTLPSPPATPPSQAPPSMTT 374

Query: 124 ----------TPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPG-PALRAPTSCSSSTW 172
                     T  P  VPHS T P+   P    A ++ +A  + G P L+A  S      
Sbjct: 375 PPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHS------ 428

Query: 173 PKPFMTVCLLPTSSMLTSP 191
              F+T+    T + LTSP
Sbjct: 429 ---FLTMSPRQTQASLTSP 444



 Score = 34.3 bits (77), Expect = 0.076
 Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 21/128 (16%)

Query: 82  PSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCPAHVPHSCTMP---- 137
           PSPP     S TL AP +   P P  ++SGPR  +   L PG P P     S T+     
Sbjct: 844 PSPP----ASPTLQAPRRPPTPGPDTSVSGPRLTL--ALAPGPPPPPSRSPSSTLSGPDL 897

Query: 138 AGTCPLFTGAP---AAAEAGLNPGPALRAP-----TSCSSSTW---PKPFMTVCLLPTSS 186
           AG     T  P      ++G   G A   P      +C  + W   P P +     P + 
Sbjct: 898 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP 957

Query: 187 MLTSPGTG 194
           +   P TG
Sbjct: 958 LPWPPATG 965



 Score = 28.1 bits (61), Expect = 5.5
 Identities = 35/133 (26%), Positives = 45/133 (33%), Gaps = 3/133 (2%)

Query: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAP-FQGSWPRPCHALSGPRAMVPNQ 119
           P + + P+     P  +   SPS     +    L AP  Q     P      P A  P +
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756

Query: 120 LHPGTPCPA-HVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMT 178
           + P    P   VP S        PL    P A  A   P P    P+  +S     PF  
Sbjct: 757 VPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATP-PLQALPSPPASFPGQAPFSP 815

Query: 179 VCLLPTSSMLTSP 191
              LP S + T P
Sbjct: 816 SASLPMSPLATPP 828



 Score = 27.7 bits (60), Expect = 7.1
 Identities = 26/106 (24%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 61  PGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGS--WPRPCHALSGPRAMVPN 118
           P  + TP      P +    S +PP +   S  L  P   +   P PC   + P  +   
Sbjct: 520 PPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTP 579

Query: 119 QLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAP 164
              P TP     P     PA   P   G P+   + L   P    P
Sbjct: 580 P--PETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPP 623


>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
          Length = 984

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 45/193 (23%), Positives = 66/193 (34%), Gaps = 36/193 (18%)

Query: 4   PLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREIPGV 63
           P +PPC  ++           G  T + +  P+  S LP L           S    PG+
Sbjct: 343 PSLPPCPESA-----------GAATTEALSPPKTPSLLPPLG---------LSQSGPPGL 382

Query: 64  ISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPG 123
           + +P   S  P       P+P  +           Q        A S P          G
Sbjct: 383 LPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG 442

Query: 124 T----PCPAHVPHSCTMPAGTCPLFTGAPAAAEAG-LNPGPALRAPTSCSSSTWPKPFMT 178
           T    P     P + + P    P+FT  P + + G   PGP++ A    SSS        
Sbjct: 443 TQNTSPSSPAAPAASSAPPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSS-------- 494

Query: 179 VCLLPTSSMLTSP 191
              LPT++  T+P
Sbjct: 495 ---LPTTTSTTAP 504



 Score = 34.7 bits (78), Expect = 0.058
 Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 17/127 (13%)

Query: 69  PHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCP- 127
           P   GP VT   +PS   +   + T    FQ     P  +  GP A VP       P P 
Sbjct: 478 PTPPGPSVTAT-APSSSSLPTTTSTTAPTFQ-----PVFSSMGPPASVP------LPAPF 525

Query: 128 -AHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSS 186
                   T P  T PLFTG  +A  A     P   A  S  S++ P     +  + +SS
Sbjct: 526 FKQTTTPATAPTTTAPLFTGLASATSA---VAPITSASPSTDSASKPAFGFGINSVSSSS 582

Query: 187 MLTSPGT 193
           + T+  T
Sbjct: 583 VSTTTST 589


>gi|24497609 nucleoporin 62kDa [Homo sapiens]
          Length = 522

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 135 TMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLT 189
           T PA T P     PAA  AG    PA   PT+  +ST P  F ++   PTSS  T
Sbjct: 183 TAPA-TLPFTPATPAATTAGATQ-PAAPTPTATITSTGPSLFASIATAPTSSATT 235


>gi|24497607 nucleoporin 62kDa [Homo sapiens]
          Length = 522

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 135 TMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLT 189
           T PA T P     PAA  AG    PA   PT+  +ST P  F ++   PTSS  T
Sbjct: 183 TAPA-TLPFTPATPAATTAGATQ-PAAPTPTATITSTGPSLFASIATAPTSSATT 235


>gi|24497605 nucleoporin 62kDa [Homo sapiens]
          Length = 522

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 135 TMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLT 189
           T PA T P     PAA  AG    PA   PT+  +ST P  F ++   PTSS  T
Sbjct: 183 TAPA-TLPFTPATPAATTAGATQ-PAAPTPTATITSTGPSLFASIATAPTSSATT 235


>gi|24497603 nucleoporin 62kDa [Homo sapiens]
          Length = 522

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 135 TMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLT 189
           T PA T P     PAA  AG    PA   PT+  +ST P  F ++   PTSS  T
Sbjct: 183 TAPA-TLPFTPATPAATTAGATQ-PAAPTPTATITSTGPSLFASIATAPTSSATT 235


>gi|223941923 OTU domain containing 1 [Homo sapiens]
          Length = 481

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 41/146 (28%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 5   LIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREIPGVI 64
           L PP  A +  E E   GEC    A      R  + +P    P        SC E+    
Sbjct: 36  LQPPGAAGAAPEPET--GECQPAAAAE---HREAAAVPAAKMPAF-----SSCFEVVSGA 85

Query: 65  STPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGT 124
           + P   +AGP       P PPH +  +Q               AL   R +    LH   
Sbjct: 86  AAPASAAAGPPGASCKPPLPPHYTSTAQI-----------TVRALGADRLL----LHGPD 130

Query: 125 PCPAHVPHSCTMPAGTCPLFTGAPAA 150
           P P     S   P G C L   APAA
Sbjct: 131 PVPG-AAGSAAAPRGRCLLLAPAPAA 155


>gi|39812378 RAN binding protein 9 [Homo sapiens]
          Length = 729

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 5/115 (4%)

Query: 66  TPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAM-VPNQLHPGT 124
           +P P +A   V+    P+PP +S  S    +P  G+      A +    +  P    P T
Sbjct: 20  SPPPPAALAPVSGVVLPAPPAVSAGSSPAGSPGGGAGGEGLGAAAAALLLHPPPPPPPAT 79

Query: 125 PCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSC----SSSTWPKP 175
             P   P     PA      +G PA       PGPA  APT      SS+  P P
Sbjct: 80  AAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAGGAPTPALVAGSSAAAPFP 134


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 10/131 (7%)

Query: 60   IPGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQ 119
            IP   +TP P +     T  H  + PH +        P   + P P           P  
Sbjct: 1256 IPDPTTTPQPFTTMQPTTMPHPTTTPHPTTTPHPTTTPHPTTTPHPTMTPDPTTTPYPTT 1315

Query: 120  LHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSS------STWP 173
                TP P   PH  T    + P+ T        G        APT   S       T P
Sbjct: 1316 ----TPDPTTTPHPTTPDPSSTPVITTVSLPTSLGTELSSPTLAPTVKPSLHPQLTFTAP 1371

Query: 174  KPFMTVCLLPT 184
             P  +   +PT
Sbjct: 1372 APHTSTSQIPT 1382



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 65   STPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGT 124
            + P PH++  Q+     PSP   S  S++  A      P        PR+  PN     T
Sbjct: 1369 TAPAPHTSTSQIPTLE-PSPALESSPSRSSTATSMD--PLSTEDFKPPRSQSPNL----T 1421

Query: 125  PCPAHVPHSCT 135
            P P H PHS +
Sbjct: 1422 PPPTHTPHSAS 1432


>gi|158262031 hypothetical protein LOC221545 isoform 1 [Homo
           sapiens]
          Length = 315

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 94  LHAPFQGSWPRPCHALSGPRAMVPNQLHPGT-PCPAHVPHSCTMPAGTCPLFTGAPAAAE 152
           ++ P +G+  R    L   +A   +QL+PGT P P   PHS T  + + PLF        
Sbjct: 1   MYQPSRGAARRLGPCLRAYQARPQDQLYPGTLPFPPLWPHSTTTTSPSSPLF-------- 52

Query: 153 AGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLTSPGTG 194
              +P P  R PT       P P   +  L ++ ++  PG G
Sbjct: 53  --WSPLPP-RLPTQRLPQVPPLPLPQIQALSSAWVVLPPGKG 91


>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
          Length = 987

 Score = 34.7 bits (78), Expect = 0.058
 Identities = 37/127 (29%), Positives = 49/127 (38%), Gaps = 17/127 (13%)

Query: 69  PHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCP- 127
           P   GP VT   +PS   +   + T    FQ     P  +  GP A VP       P P 
Sbjct: 478 PTPPGPSVTAT-APSSSSLPTTTSTTAPTFQ-----PVFSSMGPPASVP------LPAPF 525

Query: 128 -AHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSS 186
                   T P  T PLFTG  +A  A     P   A  S  S++ P     +  + +SS
Sbjct: 526 FKQTTTPATAPTTTAPLFTGLASATSA---VAPITSASPSTDSASKPAFGFGINSVSSSS 582

Query: 187 MLTSPGT 193
           + T+  T
Sbjct: 583 VSTTTST 589



 Score = 33.9 bits (76), Expect = 0.099
 Identities = 46/195 (23%), Positives = 67/195 (34%), Gaps = 40/195 (20%)

Query: 4   PLIPPCKAASLSEQEQVRGECGMMTAQGILGPRGKSKLPVLPDPRLICRYMCSCREIPGV 63
           P +PPC  ++           G  T + +  P+  S LP L           S    PG+
Sbjct: 343 PSLPPCPESA-----------GAATTEALSPPKTPSLLPPLG---------LSQSGPPGL 382

Query: 64  ISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPG 123
           + +P   S  P       P+P  +           Q        A S P          G
Sbjct: 383 LPSPSFDSKPPTTLLGLIPAPSMVPATDTKAPPTLQAETATKPQATSAPSPAPKQSFLFG 442

Query: 124 TPCPAHVPHSCTMPAGTC------PLFTGAPAAAEAG-LNPGPALRAPTSCSSSTWPKPF 176
           T   +  P S   PA +       P+FT  P + + G   PGP++ A    SSS      
Sbjct: 443 TQNTS--PSSPAAPAASSASPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSS------ 494

Query: 177 MTVCLLPTSSMLTSP 191
                LPT++  T+P
Sbjct: 495 -----LPTTTSTTAP 504


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 21/128 (16%)

Query: 82  PSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCPAHVPHSCTMP---- 137
           PSPP     S TL AP +   P P  ++SGPR  +   L PG P P     S T+     
Sbjct: 575 PSPP----ASPTLQAPRRPPTPGPDTSVSGPRLTL--ALAPGPPPPPSRSPSSTLSGPDL 628

Query: 138 AGTCPLFTGAP---AAAEAGLNPGPALRAP-----TSCSSSTW---PKPFMTVCLLPTSS 186
           AG     T  P      ++G   G A   P      +C  + W   P P +     P + 
Sbjct: 629 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP 688

Query: 187 MLTSPGTG 194
           +   P TG
Sbjct: 689 LPWPPATG 696



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 39/159 (24%), Positives = 52/159 (32%), Gaps = 28/159 (17%)

Query: 60  IPGVISTPVPHSAGPQVTRFHSPSPPHISELS-QTLHAPF--------QGSWPRPCHALS 110
           +P + + P P  A P ++   +PSP   + L+   L APF        Q  +  P     
Sbjct: 402 LPPLQAPPSP-PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPV 460

Query: 111 GPRAMVPNQLHPGTPCP-----------------AHVPHSCTMPAGTCPL-FTGAPAAAE 152
            P A  P+Q  P    P                 A  P     P    PL     P  A 
Sbjct: 461 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAP 520

Query: 153 AGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLTSP 191
             L   P    P+  +S     PF     LP S + T P
Sbjct: 521 PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 559


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 38/128 (29%), Positives = 50/128 (39%), Gaps = 21/128 (16%)

Query: 82  PSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCPAHVPHSCTMP---- 137
           PSPP     S TL AP +   P P  ++SGPR  +   L PG P P     S T+     
Sbjct: 536 PSPP----ASPTLQAPRRPPTPGPDTSVSGPRLTL--ALAPGPPPPPSRSPSSTLSGPDL 589

Query: 138 AGTCPLFTGAP---AAAEAGLNPGPALRAP-----TSCSSSTW---PKPFMTVCLLPTSS 186
           AG     T  P      ++G   G A   P      +C  + W   P P +     P + 
Sbjct: 590 AGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAP 649

Query: 187 MLTSPGTG 194
           +   P TG
Sbjct: 650 LPWPPATG 657



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 39/159 (24%), Positives = 52/159 (32%), Gaps = 28/159 (17%)

Query: 60  IPGVISTPVPHSAGPQVTRFHSPSPPHISELS-QTLHAPF--------QGSWPRPCHALS 110
           +P + + P P  A P ++   +PSP   + L+   L APF        Q  +  P     
Sbjct: 363 LPPLQAPPSP-PASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPV 421

Query: 111 GPRAMVPNQLHPGTPCP-----------------AHVPHSCTMPAGTCPL-FTGAPAAAE 152
            P A  P+Q  P    P                 A  P     P    PL     P  A 
Sbjct: 422 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAP 481

Query: 153 AGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLTSP 191
             L   P    P+  +S     PF     LP S + T P
Sbjct: 482 PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPP 520


>gi|13375926 vacuolar protein sorting 37B [Homo sapiens]
          Length = 285

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 18/93 (19%)

Query: 73  GPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPNQLHPGTPCPAHVPH 132
           G ++ +  +P PP + EL+ T   P+      P    SGP A+ P ++ P  P       
Sbjct: 166 GQRLPQALAPLPPRLPELAPTAPLPY------PAPEASGPPAVAPRRIPPPPP------- 212

Query: 133 SCTMPAGTCPL-FTGAPAAAEAGLNPGPALRAP 164
              +PAG     FT A ++ +A   P P L+ P
Sbjct: 213 --PVPAGRLATPFTAAMSSGQA--VPYPGLQCP 241


>gi|33186895 selenoprotein V [Homo sapiens]
          Length = 346

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 27/168 (16%)

Query: 35  PRGKSKLPVLPDPRLICRYMCS--CREIPGVISTPVPH---SAGPQVTRFHSPSPPHISE 89
           P G S L + P P  I   + +     IP ++  P P    +  P      +P+P  +  
Sbjct: 54  PAGTSPLVLTPAPAQIPTLVPTPALARIPRLVPPPAPAWIPTPVPTPVPVRNPTP--VPT 111

Query: 90  LSQTLHAPFQGSWPRPCHALSGPRAMVP---NQLHPGTPCPAHVPHSCTMPAGTCPLFTG 146
            ++TL  P +   P P   L+G RA +P   + L P  P           PA   PL   
Sbjct: 112 PARTLTPPVRVPAPAPAQLLAGIRAALPVLDSYLAPALPLDPP-----PEPAPELPLL-- 164

Query: 147 APAAAEAGLNPGPALRAPTSCSSSTWPKPFMTVCLLPTSSML--TSPG 192
                E    P P+L+   S SS   P P      LPT + L   SPG
Sbjct: 165 ----PEEDPEPAPSLKLIPSVSSEAGPAPGP----LPTRTPLAANSPG 204


>gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]
          Length = 639

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 20/114 (17%)

Query: 65  STPVPHSAGPQVTRFHSP------SPPHISELSQTLHAPFQGSWPRPCHALSGP------ 112
           +TP+  +AGP  T F +P      +PP     S T  AP + + P      +GP      
Sbjct: 94  TTPLWATAGPSSTTFQAPLGPSPTTPPAAERTSTTSQAPTRPA-PTTLSTTTGPAPTTPV 152

Query: 113 RAMVPNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTS 166
              VP    P TP P        +P+ +       P A EA  +P P  + P +
Sbjct: 153 ATTVPAPTTPRTPTP-------DLPSSSNSSVLPTPPATEAPSSPPPGHQWPVA 199



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 37/115 (32%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 82  PSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMV-PNQLHPGTPCPAHV-PHSCTMPAG 139
           PS P     + T  AP  G    P   +  P A   P Q    TP  A   P S T  A 
Sbjct: 55  PSHPFPRATAPTAQAPRTGP---PRATVHRPLAATSPAQSPETTPLWATAGPSSTTFQAP 111

Query: 140 TCPLFTGAPAAAEAGL-NPGPALRAPTSCSSSTWPKPFMTVCLLPTSSMLTSPGT 193
             P  T  PAA      +  P   APT+ S++T P P  T  +  T    T+P T
Sbjct: 112 LGPSPTTPPAAERTSTTSQAPTRPAPTTLSTTTGPAP--TTPVATTVPAPTTPRT 164


>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 47/170 (27%)

Query: 35  PRGKSKLPVLPDPRLICRYMCSCREIPGV-ISTPVPHSAG-----------PQVTRFHS- 81
           P+ K ++   P P      +  CR   G+ + TP  H+ G           P+ + F S 
Sbjct: 195 PKDKQRVAAPPPPER--PRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSE 252

Query: 82  -PSPPHISELSQTLHAPFQGSW-------PRPCHA--------LSGPRAMV--------- 116
            PS   +   S +  AP    W       PRP  A        LS PRA           
Sbjct: 253 VPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCS 312

Query: 117 -PNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPT 165
            P+  H   P P   P     PA   P   GAP  AE+   PGPA   P+
Sbjct: 313 GPDSKHRTLPAP---PAPTAWPAAGAP---GAPNPAESRRGPGPAQGPPS 356


>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 47/170 (27%)

Query: 35  PRGKSKLPVLPDPRLICRYMCSCREIPGV-ISTPVPHSAG-----------PQVTRFHS- 81
           P+ K ++   P P      +  CR   G+ + TP  H+ G           P+ + F S 
Sbjct: 195 PKDKQRVAAPPPPER--PRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSE 252

Query: 82  -PSPPHISELSQTLHAPFQGSW-------PRPCHA--------LSGPRAMV--------- 116
            PS   +   S +  AP    W       PRP  A        LS PRA           
Sbjct: 253 VPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCS 312

Query: 117 -PNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPT 165
            P+  H   P P   P     PA   P   GAP  AE+   PGPA   P+
Sbjct: 313 GPDSKHRTLPAP---PAPTAWPAAGAP---GAPNPAESRRGPGPAQGPPS 356


>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 47/170 (27%)

Query: 35  PRGKSKLPVLPDPRLICRYMCSCREIPGV-ISTPVPHSAG-----------PQVTRFHS- 81
           P+ K ++   P P      +  CR   G+ + TP  H+ G           P+ + F S 
Sbjct: 195 PKDKQRVAAPPPPER--PRVPFCRGSSGLSVPTPPEHAGGRRKKFTRTRPLPRTSSFLSE 252

Query: 82  -PSPPHISELSQTLHAPFQGSW-------PRPCHA--------LSGPRAMV--------- 116
            PS   +   S +  AP    W       PRP  A        LS PRA           
Sbjct: 253 VPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPAPACGELRLGRLSPPRADTGGSSSGGCS 312

Query: 117 -PNQLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPT 165
            P+  H   P P   P     PA   P   GAP  AE+   PGPA   P+
Sbjct: 313 GPDSKHRTLPAP---PAPTAWPAAGAP---GAPNPAESRRGPGPAQGPPS 356


>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
            sapiens]
          Length = 1636

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 38/136 (27%), Positives = 49/136 (36%), Gaps = 27/136 (19%)

Query: 59   EIPGVISTPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPN 118
            + PG++    P+   PQ      P PP  ++L      P Q   P    AL  P      
Sbjct: 987  QAPGLLPPQSPYPYAPQPGVLGQPPPPLHTQL---YPGPAQDPLPAHSGALPFP------ 1037

Query: 119  QLHPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPGPALRAPTSCSSSTWPKPFMT 178
               PG P P H P +      T P+    P AA         +R P+S   ST P P + 
Sbjct: 1038 --SPGPPQPPHPPLAYGPAPSTRPM---GPQAAPL------TIRGPSSAGQST-PSPHLV 1085

Query: 179  VCLLPTSSMLTSPGTG 194
                P      SPG G
Sbjct: 1086 PSPAP------SPGPG 1095



 Score = 28.9 bits (63), Expect = 3.2
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 104  RPCHALSGPRAMVPNQLHPGTPCPAHVPHSCTMPAGT-CPLFTGAPAAAEAGLNPGPALR 162
            RP   L  P A +P    P    PA +P S  +P+ +  PL +  P A +    P P   
Sbjct: 1508 RPPGGLESPVASLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEP-PVPE 1566

Query: 163  APTS 166
            AP+S
Sbjct: 1567 APSS 1570


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 43/137 (31%), Positives = 54/137 (39%), Gaps = 34/137 (24%)

Query: 61  PGVISTPVPHSAGPQVTRFH-----SP-SPPHISELSQTLHAPFQ------GSWPRPCHA 108
           P   + PVPH+   Q    H     SP  PPH S      H P Q      G    P HA
Sbjct: 234 PQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSP-----HPPLQPLTGSAGQPSAPSHA 288

Query: 109 L--------SGPRAMVPNQL--HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPG 158
                     GP ++    L  HPG P P  +P   +   G  PL T +PAAA     P 
Sbjct: 289 QPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQ--GQAPLGT-SPAAA----YPH 341

Query: 159 PALRAPTSCSSSTWPKP 175
            +L+ P S S+    +P
Sbjct: 342 TSLQLPASQSALQSQQP 358



 Score = 28.5 bits (62), Expect = 4.2
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 20/128 (15%)

Query: 66  TPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPN------- 118
           TP P SA P   +  +P P   +       +P     P    A   P A VP+       
Sbjct: 194 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA---PTAPVPHTHIQQAP 250

Query: 119 QLHPGTPCPAH-----VPHSCTMPAGTCPLFTGAPAAAEAGLN----PGP-ALRAPTSCS 168
            LHP  P   H      PH    P         AP+ A+  L+    PGP +L+A     
Sbjct: 251 ALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 310

Query: 169 SSTWPKPF 176
               P+PF
Sbjct: 311 HPGPPQPF 318


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 43/137 (31%), Positives = 54/137 (39%), Gaps = 34/137 (24%)

Query: 61  PGVISTPVPHSAGPQVTRFH-----SP-SPPHISELSQTLHAPFQ------GSWPRPCHA 108
           P   + PVPH+   Q    H     SP  PPH S      H P Q      G    P HA
Sbjct: 788 PQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSP-----HPPLQPLTGSAGQPSAPSHA 842

Query: 109 L--------SGPRAMVPNQL--HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPG 158
                     GP ++    L  HPG P P  +P   +   G  PL T +PAAA     P 
Sbjct: 843 QPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQ--GQAPLGT-SPAAA----YPH 895

Query: 159 PALRAPTSCSSSTWPKP 175
            +L+ P S S+    +P
Sbjct: 896 TSLQLPASQSALQSQQP 912



 Score = 28.5 bits (62), Expect = 4.2
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 20/128 (15%)

Query: 66  TPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPN------- 118
           TP P SA P   +  +P P   +       +P     P    A   P A VP+       
Sbjct: 748 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA---PTAPVPHTHIQQAP 804

Query: 119 QLHPGTPCPAH-----VPHSCTMPAGTCPLFTGAPAAAEAGLN----PGP-ALRAPTSCS 168
            LHP  P   H      PH    P         AP+ A+  L+    PGP +L+A     
Sbjct: 805 ALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 864

Query: 169 SSTWPKPF 176
               P+PF
Sbjct: 865 HPGPPQPF 872


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 33.9 bits (76), Expect = 0.099
 Identities = 43/137 (31%), Positives = 54/137 (39%), Gaps = 34/137 (24%)

Query: 61  PGVISTPVPHSAGPQVTRFH-----SP-SPPHISELSQTLHAPFQ------GSWPRPCHA 108
           P   + PVPH+   Q    H     SP  PPH S      H P Q      G    P HA
Sbjct: 788 PQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSP-----HPPLQPLTGSAGQPSAPSHA 842

Query: 109 L--------SGPRAMVPNQL--HPGTPCPAHVPHSCTMPAGTCPLFTGAPAAAEAGLNPG 158
                     GP ++    L  HPG P P  +P   +   G  PL T +PAAA     P 
Sbjct: 843 QPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQ--GQAPLGT-SPAAA----YPH 895

Query: 159 PALRAPTSCSSSTWPKP 175
            +L+ P S S+    +P
Sbjct: 896 TSLQLPASQSALQSQQP 912



 Score = 28.5 bits (62), Expect = 4.2
 Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 20/128 (15%)

Query: 66  TPVPHSAGPQVTRFHSPSPPHISELSQTLHAPFQGSWPRPCHALSGPRAMVPN------- 118
           TP P SA P   +  +P P   +       +P     P    A   P A VP+       
Sbjct: 748 TPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQA---PTAPVPHTHIQQAP 804

Query: 119 QLHPGTPCPAH-----VPHSCTMPAGTCPLFTGAPAAAEAGLN----PGP-ALRAPTSCS 168
            LHP  P   H      PH    P         AP+ A+  L+    PGP +L+A     
Sbjct: 805 ALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 864

Query: 169 SSTWPKPF 176
               P+PF
Sbjct: 865 HPGPPQPF 872


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,593,837
Number of Sequences: 37866
Number of extensions: 744516
Number of successful extensions: 3310
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 279
Number of HSP's that attempted gapping in prelim test: 3040
Number of HSP's gapped (non-prelim): 536
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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