NUP62 23946

Name: NUP62	Sequence: fasta or formatted (522aa)		NCBI GI: 24497607
Description: nucleoporin 62kDa		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt mRNA [522aa] nucleoporin 62kDa alt mRNA [522aa] nucleoporin 62kDa alt mRNA [522aa] nucleoporin 62kDa
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.6 71 3 C cysteine 0.6 3 1 D aspartate 2.9 15 1 E glutamate 4.6 24 2 F phenylalanine 5.2 27 1 G glycine 9.6 50 2 H histidine 1.0 5 1 I isoleucine 3.4 18 2 K lysine 3.6 19 1 L leucine 8.0 42 2 M methionine 1.0 5 1 N asparagine 3.4 18 1 P proline 6.5 34 2 Q glutamine 5.2 27 2 R arginine 2.1 11 2 S serine 10.3 54 4 T threonine 15.5 81 3 V valine 2.3 12 1 W tryptophan 0.6 3 1 Y tyrosine 0.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin 62kDa NUP62 1.000 nucleoporin 62kDa NUP62 1.000 nucleoporin 62kDa NUP62 1.000 nucleoporin 62kDa NUP62CL 0.148 nucleoporin 62kDa C-terminal like MUC5B 0.065 mucin 5, subtype B, tracheobronchial MUC5AC 0.064 mucin 5AC MUC21 0.059 mucin 21 NUPL1 0.053 nucleoporin like 1 isoform a NUPL1 0.051 nucleoporin like 1 isoform b MUC3A 0.050 PREDICTED: mucin 3A, intestinal NUP153 0.050 nucleoporin 153kDa NUP98 0.048 nucleoporin 98kD isoform 4 NUP98 0.048 nucleoporin 98kD isoform 3 NUP98 0.048 nucleoporin 98kD isoform 1 NUP98 0.048 nucleoporin 98kD isoform 2 MUC2 0.046 mucin 2 precursor LOC100294420 0.046 PREDICTED: similar to mucin 2 LOC100294249 0.046 PREDICTED: hypothetical protein XP_002344067 MUC3A 0.046 PREDICTED: mucin 3A, cell surface associated, parti... LOC100293409 0.046 PREDICTED: similar to Mucin-19 LOC100291118 0.046 PREDICTED: hypothetical protein XP_002347351 LOC100287737 0.046 PREDICTED: hypothetical protein XP_002343203 MUC6 0.046 mucin 6, gastric LOC729792 0.045 PREDICTED: hypothetical protein LOC729792 0.045 PREDICTED: hypothetical protein LOC729792 0.045 PREDICTED: hypothetical protein LOC100294501 0.045 PREDICTED: hypothetical protein LOC100294238 0.045 PREDICTED: hypothetical protein LOC100294204 0.045 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.