Guide to the Human Genome
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Name: LOC100132826 Sequence: fasta or formatted (234aa) NCBI GI: 169210116
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         15           2
 C cysteine            3.8          9           2
 D aspartate           1.7          4           1
 E glutamate           0.9          2           1
 F phenylalanine       3.4          8           1
 G glycine             5.1         12           2
 H histidine           4.3         10           1
 I isoleucine          3.4          8           1
 K lysine              1.7          4           1
 L leucine            13.7         32           2
 M methionine          0.9          2           1
 N asparagine          2.6          6           1
 P proline            12.4         29           2
 Q glutamine           4.7         11           2
 R arginine            6.4         15           2
 S serine             14.1         33           2
 T threonine           9.4         22           3
 V valine              3.4          8           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC728836             0.982   PREDICTED: hypothetical protein 
LOC100132632          0.947   PREDICTED: hypothetical protein 
POM121L2              0.022   POM121 membrane glycoprotein-like 2 
FLJ22184              0.020   PREDICTED: hypothetical protein FLJ22184 
SHANK1                0.020   SH3 and multiple ankyrin repeat domains 1 
KCNC3                 0.018   Shaw-related voltage-gated potassium channel protein...
LOC100292374          0.018   PREDICTED: similar to transmembrane protein 125 [Ho...
LOC100290008          0.018   PREDICTED: hypothetical protein XP_002346440 
LOC100288382          0.018   PREDICTED: hypothetical protein XP_002342213 
LOC100288314          0.018   PREDICTED: hypothetical protein XP_002342147 
LOC100292845          0.015   PREDICTED: hypothetical protein 
LOC100289230          0.015   PREDICTED: hypothetical protein XP_002342600 
PODXL                 0.015   podocalyxin-like isoform 1 precursor 
PDE4A                 0.015   phosphodiesterase 4A isoform 3 
PDE4A                 0.015   phosphodiesterase 4A isoform 2 
PDE4A                 0.015   phosphodiesterase 4A isoform 1 
MUC17                 0.015   mucin 17 
RCOR2                 0.015   REST corepressor 2 
BAT2                  0.015   HLA-B associated transcript-2 
PPRC1                 0.015   peroxisome proliferator-activated receptor gamma, co...
LMTK3                 0.015   lemur tyrosine kinase 3 
ULK2                  0.013   unc-51-like kinase 2 
ULK2                  0.013   unc-51-like kinase 2 
PHC3                  0.013   polyhomeotic like 3 
WASF1                 0.013   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.013   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.013   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.013   Wiskott-Aldrich syndrome protein family member 1 [Hom...
LOC100294448          0.013   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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