Guide to the Human Genome
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Name: LOC100132632 Sequence: fasta or formatted (234aa) NCBI GI: 169162893
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         17           2
 C cysteine            3.8          9           2
 D aspartate           1.7          4           1
 E glutamate           1.3          3           1
 F phenylalanine       3.0          7           1
 G glycine             4.7         11           1
 H histidine           3.8          9           1
 I isoleucine          3.8          9           1
 K lysine              2.1          5           1
 L leucine            14.5         34           3
 M methionine          0.9          2           1
 N asparagine          2.1          5           1
 P proline            12.0         28           2
 Q glutamine           3.8          9           2
 R arginine            7.3         17           2
 S serine             14.5         34           2
 T threonine           9.0         21           3
 V valine              2.6          6           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100132826          0.958   PREDICTED: hypothetical protein 
LOC728836             0.956   PREDICTED: hypothetical protein 
LOC100292374          0.022   PREDICTED: similar to transmembrane protein 125 [Ho...
LOC100290008          0.022   PREDICTED: hypothetical protein XP_002346440 
LOC100288314          0.022   PREDICTED: hypothetical protein XP_002342147 
TBC1D10B              0.018   TBC1 domain family, member 10B 
KCNC3                 0.018   Shaw-related voltage-gated potassium channel protein...
PPRC1                 0.018   peroxisome proliferator-activated receptor gamma, co...
LOC100288382          0.015   PREDICTED: hypothetical protein XP_002342213 
MLL2                  0.015   myeloid/lymphoid or mixed-lineage leukemia 2 
TRIP10                0.015   thyroid hormone receptor interactor 10 
POM121L2              0.015   POM121 membrane glycoprotein-like 2 
PODXL                 0.015   podocalyxin-like isoform 1 precursor 
ZFHX4                 0.015   zinc finger homeodomain 4 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
LOC729915             0.015   PREDICTED: similar to Putative POM121-like protein ...
PHC3                  0.013   polyhomeotic like 3 
PCLO                  0.013   piccolo isoform 2 
PCLO                  0.013   piccolo isoform 1 
MUC6                  0.013   mucin 6, gastric 
KIAA1522              0.013   hypothetical protein LOC57648 
NCF1                  0.011   neutrophil cytosolic factor 1 
ULK2                  0.011   unc-51-like kinase 2 
ULK2                  0.011   unc-51-like kinase 2 
ADAM19                0.011   ADAM metallopeptidase domain 19 preproprotein 
WASF1                 0.011   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.011   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.011   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.011   Wiskott-Aldrich syndrome protein family member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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