BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens] (125 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens] 247 1e-66 gi|239750572 PREDICTED: similar to hCG1639781 [Homo sapiens] 247 1e-66 gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo sap... 247 1e-66 gi|50659069 ATP synthase, H+ transporting, mitochondrial F0 comp... 202 4e-53 gi|4885081 ATP synthase, H+ transporting, mitochondrial F0 compl... 202 4e-53 gi|4502301 ATP synthase, H+ transporting, mitochondrial F0 compl... 134 1e-32 gi|50659074 ATP synthase, H+ transporting, mitochondrial F0 comp... 134 1e-32 gi|85794840 ATP synthase, H+ transporting, mitochondrial F0 comp... 131 2e-31 gi|50593533 ATP synthase, H+ transporting, mitochondrial F0 comp... 131 2e-31 gi|217416366 major facilitator superfamily domain containing 9 [... 30 0.47 gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 30 0.47 gi|4506975 solute carrier family 12 (sodium/potassium/chloride t... 28 1.4 gi|162809334 pregnancy-zone protein [Homo sapiens] 28 1.4 gi|169208819 PREDICTED: similar to kinase D-interacting substrat... 28 2.3 gi|169208593 PREDICTED: similar to kinase D-interacting substrat... 28 2.3 gi|169208169 PREDICTED: similar to kinase D-interacting substrat... 28 2.3 gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Ho... 28 2.3 gi|239756239 PREDICTED: similar to hCG2006901 [Homo sapiens] 27 3.1 gi|157743247 F-box protein 45 [Homo sapiens] 27 3.1 gi|31543397 phosphoglycerate kinase 2 [Homo sapiens] 27 4.0 gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1... 27 5.2 gi|13994190 frizzled 8 [Homo sapiens] 27 5.2 gi|4502565 calpain, small subunit 1 [Homo sapiens] 27 5.2 gi|51599151 calpain, small subunit 1 [Homo sapiens] 27 5.2 gi|4505101 microtubule-associated protein 7 [Homo sapiens] 27 5.2 gi|13994263 FERM domain containing 8 [Homo sapiens] 27 5.2 gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo s... 26 6.8 gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens] 26 6.8 gi|18959212 GS homeobox 2 [Homo sapiens] 26 6.8 gi|74316006 CNKSR family member 3 [Homo sapiens] 26 6.8 >gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens] Length = 125 Score = 247 bits (631), Expect = 1e-66 Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS Sbjct: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA Sbjct: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 Query: 121 MGLFC 125 MGLFC Sbjct: 121 MGLFC 125 >gi|239750572 PREDICTED: similar to hCG1639781 [Homo sapiens] Length = 125 Score = 247 bits (631), Expect = 1e-66 Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS Sbjct: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA Sbjct: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 Query: 121 MGLFC 125 MGLFC Sbjct: 121 MGLFC 125 >gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo sapiens] Length = 125 Score = 247 bits (631), Expect = 1e-66 Identities = 125/125 (100%), Positives = 125/125 (100%) Query: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS Sbjct: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA Sbjct: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 Query: 121 MGLFC 125 MGLFC Sbjct: 121 MGLFC 125 >gi|50659069 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 precursor [Homo sapiens] Length = 136 Score = 202 bits (515), Expect = 4e-53 Identities = 107/125 (85%), Positives = 110/125 (88%) Query: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 MQT GAL ISPA CCT GLIR VSASFLNSP NS KQPSYS+ PL+VARREFQTS+VS Sbjct: 1 MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQVARREFQTSVVS 60 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA Sbjct: 61 RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 120 Query: 121 MGLFC 125 MGLFC Sbjct: 121 MGLFC 125 >gi|4885081 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 precursor [Homo sapiens] Length = 136 Score = 202 bits (515), Expect = 4e-53 Identities = 107/125 (85%), Positives = 110/125 (88%) Query: 1 MQTTGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVS 60 MQT GAL ISPA CCT GLIR VSASFLNSP NS KQPSYS+ PL+VARREFQTS+VS Sbjct: 1 MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQVARREFQTSVVS 60 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA Sbjct: 61 RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 120 Query: 121 MGLFC 125 MGLFC Sbjct: 121 MGLFC 125 >gi|4502301 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 precursor [Homo sapiens] Length = 142 Score = 134 bits (338), Expect = 1e-32 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%) Query: 15 LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60 L CT LIR +SAS L+ P+ S + + ++ +REFQTS +S Sbjct: 7 LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA Sbjct: 67 RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126 Query: 121 MGLFC 125 MGLFC Sbjct: 127 MGLFC 131 >gi|50659074 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 precursor [Homo sapiens] Length = 142 Score = 134 bits (338), Expect = 1e-32 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%) Query: 15 LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60 L CT LIR +SAS L+ P+ S + + ++ +REFQTS +S Sbjct: 7 LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66 Query: 61 RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120 RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA Sbjct: 67 RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126 Query: 121 MGLFC 125 MGLFC Sbjct: 127 MGLFC 131 >gi|85794840 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 isoform b precursor [Homo sapiens] Length = 198 Score = 131 bits (329), Expect = 2e-31 Identities = 77/110 (70%), Positives = 82/110 (74%), Gaps = 5/110 (4%) Query: 21 LIRTVSASFLNSPDNSPKQPSYS---SSPLR--VARREFQTSIVSRDIDIAAKLIGAGAA 75 L R +SA L P+ + S S PL V+ R FQTS +SRDID AAK IGAGAA Sbjct: 78 LSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAA 137 Query: 76 TVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEAMGLFC 125 TVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEAMGLFC Sbjct: 138 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFC 187 >gi|50593533 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 isoform a precursor [Homo sapiens] Length = 157 Score = 131 bits (329), Expect = 2e-31 Identities = 77/110 (70%), Positives = 82/110 (74%), Gaps = 5/110 (4%) Query: 21 LIRTVSASFLNSPDNSPKQPSYS---SSPLR--VARREFQTSIVSRDIDIAAKLIGAGAA 75 L R +SA L P+ + S S PL V+ R FQTS +SRDID AAK IGAGAA Sbjct: 37 LSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAISRDIDTAAKFIGAGAA 96 Query: 76 TVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEAMGLFC 125 TVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEAMGLFC Sbjct: 97 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFC 146 >gi|217416366 major facilitator superfamily domain containing 9 [Homo sapiens] Length = 474 Score = 30.0 bits (66), Expect = 0.47 Identities = 14/43 (32%), Positives = 23/43 (53%) Query: 54 FQTSIVSRDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIG 96 F S+V + + K +GA G+ GS GI ++F S ++G Sbjct: 58 FGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVG 100 >gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo sapiens] Length = 425 Score = 30.0 bits (66), Expect = 0.47 Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 23/142 (16%) Query: 5 GALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSR--- 61 G L S W +CC GL R V + P+++ + LRV R I+S Sbjct: 80 GGLTHSGLWRICCLEGLKRGVCVKINHFPEDTDYDHDSAEYLLRVVRASSIFPILSAILL 139 Query: 62 ---DIDIAAKLIGAGAATV----GVAGSGAGIGKVFGSLII--------GYARNLSLKQQ 106 + +AA + + G+ AG+ + G ++ G R+ K Sbjct: 140 LLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVYISANAGEPGPKRDEEKKNH 199 Query: 107 L-----FSYATLGFALSEAMGL 123 F + L F L+E +G+ Sbjct: 200 YSYGWSFYFGGLSFILAEVIGV 221 >gi|4506975 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 [Homo sapiens] Length = 1212 Score = 28.5 bits (62), Expect = 1.4 Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 50 ARREFQTSIVSRDIDIAAKLIGAGAATVGVAGSGAG 85 ++ FQ +VS + AA A AA AG+GAG Sbjct: 77 SQSRFQVDLVSENAGRAAAAAAAAAAAAAAAGAGAG 112 >gi|162809334 pregnancy-zone protein [Homo sapiens] Length = 1482 Score = 28.5 bits (62), Expect = 1.4 Identities = 14/27 (51%), Positives = 16/27 (59%) Query: 88 KVFGSLIIGYARNLSLKQQLFSYATLG 114 K G LI GY R L+ K Q SY+T G Sbjct: 1009 KAVGYLITGYQRQLNYKHQDGSYSTFG 1035 >gi|169208819 PREDICTED: similar to kinase D-interacting substrate 220 [Homo sapiens] Length = 380 Score = 27.7 bits (60), Expect = 2.3 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Query: 19 WGLIRTVSASFLNSPDNSPKQPSYSSSP--LRVARREFQTSIVSRDIDIAAKLIGAGAAT 76 WG +A+ ++ D+ P +P+ ++SP R + R +++R A+ G Sbjct: 177 WGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLAR----FARAAGGHGGE 232 Query: 77 VGVAGSGAGIGKVFGSLIIGYARNLSL 103 G AG +G + GS R++SL Sbjct: 233 AGSAGKNSGRHRAQGSERPELGRSMSL 259 >gi|169208593 PREDICTED: similar to kinase D-interacting substrate 220 [Homo sapiens] Length = 380 Score = 27.7 bits (60), Expect = 2.3 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Query: 19 WGLIRTVSASFLNSPDNSPKQPSYSSSP--LRVARREFQTSIVSRDIDIAAKLIGAGAAT 76 WG +A+ ++ D+ P +P+ ++SP R + R +++R A+ G Sbjct: 177 WGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLAR----FARAAGGHGGE 232 Query: 77 VGVAGSGAGIGKVFGSLIIGYARNLSL 103 G AG +G + GS R++SL Sbjct: 233 AGSAGKNSGRHRAQGSERPELGRSMSL 259 >gi|169208169 PREDICTED: similar to kinase D-interacting substrate 220 [Homo sapiens] Length = 380 Score = 27.7 bits (60), Expect = 2.3 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 6/87 (6%) Query: 19 WGLIRTVSASFLNSPDNSPKQPSYSSSP--LRVARREFQTSIVSRDIDIAAKLIGAGAAT 76 WG +A+ ++ D+ P +P+ ++SP R + R +++R A+ G Sbjct: 177 WGRAAAAAAARGSNSDSPPGRPAPAASPEHRRPSPRRLPRPLLAR----FARAAGGHGGE 232 Query: 77 VGVAGSGAGIGKVFGSLIIGYARNLSL 103 G AG +G + GS R++SL Sbjct: 233 AGSAGKNSGRHRAQGSERPELGRSMSL 259 >gi|7656948 voltage-dependent calcium channel gamma-4 subunit [Homo sapiens] Length = 327 Score = 27.7 bits (60), Expect = 2.3 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Query: 5 GALLISPAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDID 64 G L S W +CC G+ + + P+++ S LR+ R I+S + Sbjct: 59 GDLTHSGLWRVCCIEGIYKGHCFRINHFPEDNDYDHDSSEYLLRIVRASSVFPILSTILL 118 Query: 65 IAAKL-IGAG---------AATVGVAGSGAGIGKVFGSLI 94 + L IGAG + G+ AG+ + G ++ Sbjct: 119 LLGGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIV 158 >gi|239756239 PREDICTED: similar to hCG2006901 [Homo sapiens] Length = 262 Score = 27.3 bits (59), Expect = 3.1 Identities = 13/35 (37%), Positives = 17/35 (48%) Query: 4 TGALLISPAWNLCCTWGLIRTVSASFLNSPDNSPK 38 T A + W C W +R+V A FL S + S K Sbjct: 120 TAASQMRQVWEATCLWRRLRSVRADFLVSTEPSLK 154 >gi|157743247 F-box protein 45 [Homo sapiens] Length = 286 Score = 27.3 bits (59), Expect = 3.1 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 4/53 (7%) Query: 65 IAAKLIGAGAAT--VGVAGSGAGIGKVFGSLIIGYARNLSLK--QQLFSYATL 113 +AA GAGAA+ G +G GAG G GS G L + + +FSY L Sbjct: 1 MAAPAPGAGAASGGAGCSGGGAGAGAGSGSGAAGAGGRLPSRVLELVFSYLEL 53 >gi|31543397 phosphoglycerate kinase 2 [Homo sapiens] Length = 417 Score = 26.9 bits (58), Expect = 4.0 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 11 PAWNLCCTWGLIRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLI 70 P+ C G V S L PD P YS +P+ V + S++ +D+ + Sbjct: 45 PSIKYCLDNGAKAVVLMSHLGRPDGVPMPDKYSLAPVAVELK----SLLGKDVLFLKDCV 100 Query: 71 GA 72 GA Sbjct: 101 GA 102 >gi|13929462 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase 1, membrane-bound form [Homo sapiens] Length = 398 Score = 26.6 bits (57), Expect = 5.2 Identities = 14/42 (33%), Positives = 20/42 (47%) Query: 58 IVSRDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYAR 99 + RD+ +L+G G + S A IG+ G L G AR Sbjct: 42 LAGRDLSRLPQLVGVSTPLQGGSNSAAAIGQSSGELRTGGAR 83 >gi|13994190 frizzled 8 [Homo sapiens] Length = 694 Score = 26.6 bits (57), Expect = 5.2 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Query: 71 GAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFAL 117 GAG A G +GAG G G G L +Q Y T G AL Sbjct: 352 GAGGAAAGAGAAGAGAGGPGGR---GEYEELGAVEQHVRYETTGPAL 395 >gi|4502565 calpain, small subunit 1 [Homo sapiens] Length = 268 Score = 26.6 bits (57), Expect = 5.2 Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 69 LIGAGAATVGVAGSGAGIGKVFGSLIIG 96 L G G G G G G+G V G LI G Sbjct: 8 LKGGGGGGGGGGGLGGGLGNVLGGLISG 35 >gi|51599151 calpain, small subunit 1 [Homo sapiens] Length = 268 Score = 26.6 bits (57), Expect = 5.2 Identities = 13/28 (46%), Positives = 14/28 (50%) Query: 69 LIGAGAATVGVAGSGAGIGKVFGSLIIG 96 L G G G G G G+G V G LI G Sbjct: 8 LKGGGGGGGGGGGLGGGLGNVLGGLISG 35 >gi|4505101 microtubule-associated protein 7 [Homo sapiens] Length = 749 Score = 26.6 bits (57), Expect = 5.2 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 10/83 (12%) Query: 26 SASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLIGAGAATVGVAGSGAG 85 SA+ LNSPD + R+ +++S+V+R + + +T ++G A Sbjct: 203 SATLLNSPDRAR----------RLQLSPWESSVVNRLLTPTHSFLARSKSTAALSGEAAS 252 Query: 86 IGKVFGSLIIGYARNLSLKQQLF 108 + ++RN + +LF Sbjct: 253 CSPIIMPYKAAHSRNSMDRPKLF 275 >gi|13994263 FERM domain containing 8 [Homo sapiens] Length = 464 Score = 26.6 bits (57), Expect = 5.2 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 9/90 (10%) Query: 31 NSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLIGAGAATVGVAGSGAGIGKVF 90 +S SP PS S +P++ + Q S+VS I +T+ G GI +V Sbjct: 382 DSATGSPSDPSSSLAPVQRPKLRRQGSVVSSRIQ--------HLSTIDYVEDGKGIRRVK 433 Query: 91 GSLIIG-YARNLSLKQQLFSYATLGFALSE 119 ++R LSL Q ++ G +L + Sbjct: 434 PKRTTSFFSRQLSLGQGSYTVVQPGDSLEQ 463 >gi|221307575 Rho-type GTPase-activating protein FLJ32810 [Homo sapiens] Length = 874 Score = 26.2 bits (56), Expect = 6.8 Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 91 GSLIIGYARNLSLKQQLFSYATLGF 115 GSL+IG RNLS+ Q FS + F Sbjct: 43 GSLLIGALRNLSMAVQKFSQSLQDF 67 >gi|40255272 xin actin-binding repeat containing 1 [Homo sapiens] Length = 1843 Score = 26.2 bits (56), Expect = 6.8 Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 28 SFLNSPDNSPKQPSYSSSPLRVARREFQT 56 SF NS D P +P +R AR F+T Sbjct: 134 SFANSTDQEPTRPQPGGGDVRAARWLFET 162 >gi|18959212 GS homeobox 2 [Homo sapiens] Length = 304 Score = 26.2 bits (56), Expect = 6.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 73 GAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYA 111 G+ G G+GAG+ GS + G A L L + FS A Sbjct: 74 GSVGAGSGGAGAGVTGAGGSGVAGAAGALPLLKSQFSSA 112 >gi|74316006 CNKSR family member 3 [Homo sapiens] Length = 555 Score = 26.2 bits (56), Expect = 6.8 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Query: 22 IRTVSASFLNSPDNSPKQPSYSSSPLRVARREFQTSIVSRDIDIAAKLIGAGAA 75 +R S + N + K P+Y + R A EF TS+V +LIGA A Sbjct: 88 LRASSHNLQNYISSRRKSPAYDGNTSRKAPNEFLTSVV--------ELIGAAKA 133 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.134 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,091,839 Number of Sequences: 37866 Number of extensions: 162107 Number of successful extensions: 740 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 710 Number of HSP's gapped (non-prelim): 43 length of query: 125 length of database: 18,247,518 effective HSP length: 90 effective length of query: 35 effective length of database: 14,839,578 effective search space: 519385230 effective search space used: 519385230 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.