Guide to the Human Genome
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Name: ATP5G2 Sequence: fasta or formatted (198aa) NCBI GI: 85794840
Description:

ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 isoform b precursor

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt prot [157aa] ATP synthase, H+ transporting, mitochondrial F0 complex, subunit ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         24           2
 C cysteine            3.5          7           1
 D aspartate           1.5          3           1
 E glutamate           3.0          6           1
 F phenylalanine       5.6         11           1
 G glycine             7.1         14           1
 H histidine           1.0          2           1
 I isoleucine          5.6         11           2
 K lysine              3.0          6           1
 L leucine            13.6         27           2
 M methionine          2.5          5           1
 N asparagine          0.5          1           1
 P proline             6.1         12           1
 Q glutamine           2.0          4           2
 R arginine            4.0          8           1
 S serine             15.7         31           3
 T threonine           5.1         10           1
 V valine              6.6         13           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP synthase, H+ transporting, mitochondrial F0 comp... 
ATP5G2                0.738   ATP synthase, H+ transporting, mitochondrial F0 comp...
ATP5G3                0.473   ATP synthase, H+ transporting, mitochondrial F0 compl...
ATP5G3                0.473   ATP synthase, H+ transporting, mitochondrial F0 comp...
ATP5G1                0.408   ATP synthase, H+ transporting, mitochondrial F0 comp...
ATP5G1                0.408   ATP synthase, H+ transporting, mitochondrial F0 compl...
LOC390424             0.299   PREDICTED: similar to hCG1639781 
LOC390424             0.299   PREDICTED: similar to hCG1639781 
LOC390424             0.299   PREDICTED: hypothetical protein LOC390424 
LOC100132635          0.028   PREDICTED: similar to mucin 5, partial 
ATP6V0C               0.025   ATPase, H+ transporting, lysosomal, V0 subunit c [Hom...
FOXC1                 0.023   forkhead box C1 
TRIOBP                0.020   TRIO and F-actin binding protein isoform 6 
FCHO1                 0.017   FCH domain only 1 isoform c 
FCHO1                 0.017   FCH domain only 1 isoform b 
FCHO1                 0.017   FCH domain only 1 isoform b 
FCHO1                 0.017   FCH domain only 1 isoform a 
SLC9A10               0.017   sperm-specific sodium proton exchanger 
MUC16                 0.014   mucin 16 
C19orf26              0.014   downstream of Stk11 
SLC12A2               0.014   solute carrier family 12 (sodium/potassium/chloride t...
KIAA0754              0.011   hypothetical protein LOC643314 
ATP6V0B               0.011   ATPase, H+ transporting, lysosomal 21kDa, V0 subunit...
KRTAP10-2             0.011   keratin associated protein 10-2 
ATP6V0B               0.011   ATPase, H+ transporting, lysosomal 21kDa, V0 subunit ...
CADPS                 0.011   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.011   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.011   Ca2+-dependent secretion activator isoform 3 
DSG1                  0.008   desmoglein 1 preproprotein 
MUC17                 0.008   mucin 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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