Guide to the Human Genome
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Name: ATP5G3 Sequence: fasta or formatted (142aa) NCBI GI: 50659074
Description:

ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 precursor

Referenced in:

Oxidative Phosphorylation

Other entries for this name:
alt mRNA [142aa] ATP synthase, H+ transporting, mitochondrial F0 complex, subunit ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.5         22           2
 C cysteine            2.1          3           1
 D aspartate           1.4          2           1
 E glutamate           2.8          4           1
 F phenylalanine       7.0         10           1
 G glycine            11.3         16           1
 H histidine           0.0          0           0
 I isoleucine          7.7         11           2
 K lysine              2.1          3           1
 L leucine             9.2         13           1
 M methionine          2.8          4           1
 N asparagine          2.1          3           1
 P proline             2.8          4           1
 Q glutamine           4.2          6           2
 R arginine            5.6          8           1
 S serine             10.6         15           1
 T threonine           4.9          7           1
 V valine              5.6          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP synthase, H+ transporting, mitochondrial F0 comp... 
ATP5G3                1.000   ATP synthase, H+ transporting, mitochondrial F0 compl...
ATP5G2                0.677   ATP synthase, H+ transporting, mitochondrial F0 comp...
ATP5G2                0.677   ATP synthase, H+ transporting, mitochondrial F0 comp...
ATP5G1                0.617   ATP synthase, H+ transporting, mitochondrial F0 comp...
ATP5G1                0.617   ATP synthase, H+ transporting, mitochondrial F0 compl...
LOC390424             0.440   PREDICTED: similar to hCG1639781 
LOC390424             0.440   PREDICTED: similar to hCG1639781 
LOC390424             0.440   PREDICTED: hypothetical protein LOC390424 
ATP6V0C               0.036   ATPase, H+ transporting, lysosomal, V0 subunit c [Hom...
CLCN7                 0.024   chloride channel 7 isoform b 
CLCN7                 0.024   chloride channel 7 isoform a 
SLC37A1               0.024   solute carrier family 37 member 1 
ATP6V0B               0.016   ATPase, H+ transporting, lysosomal 21kDa, V0 subunit...
ATP6V0B               0.016   ATPase, H+ transporting, lysosomal 21kDa, V0 subunit ...
SLC12A2               0.016   solute carrier family 12 (sodium/potassium/chloride t...
CLEC3B                0.012   C-type lectin domain family 3, member B 
MFSD9                 0.012   major facilitator superfamily domain containing 9 [...
GPRC5C                0.012   G protein-coupled receptor family C, group 5, member...
GPRC5C                0.012   G protein-coupled receptor family C, group 5, member...
KRT24                 0.008   keratin 24 
HOXD9                 0.008   homeobox D9 
LMBRD2                0.008   LMBR1 domain containing 2 
LOC100294501          0.008   PREDICTED: hypothetical protein 
DSG1                  0.008   desmoglein 1 preproprotein 
RP1                   0.008   retinitis pigmentosa RP1 protein 
CADPS                 0.008   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.008   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.008   Ca2+-dependent secretion activator isoform 3 
CAPNS1                0.004   calpain, small subunit 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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