Guide to the Human Genome
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Name: FLJ32810 Sequence: fasta or formatted (874aa) NCBI GI: 221307575
Description:

Rho-type GTPase-activating protein FLJ32810

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         51           2
 C cysteine            1.5         13           1
 D aspartate           4.3         38           2
 E glutamate           8.2         72           3
 F phenylalanine       4.1         36           1
 G glycine             5.1         45           2
 H histidine           1.9         17           1
 I isoleucine          5.7         50           2
 K lysine              8.0         70           3
 L leucine             8.8         77           2
 M methionine          2.4         21           2
 N asparagine          3.8         33           2
 P proline             5.4         47           2
 Q glutamine           4.9         43           2
 R arginine            5.0         44           3
 S serine             11.0         96           3
 T threonine           5.0         44           2
 V valine              4.7         41           2
 W tryptophan          0.8          7           1
 Y tyrosine            3.3         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho-type GTPase-activating protein FLJ32810 
ARHGAP26              0.441   GTPase regulator associated with the focal adhesion k...
OPHN1                 0.424   oligophrenin 1 
ARHGAP10              0.412   Rho GTPase activating protein 10 
ARHGAP26              0.408   GTPase regulator associated with the focal adhesion...
ARHGAP15              0.069   ARHGAP15 
ARHGAP27              0.058   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.058   Rho GTPase activating protein 27 isoform a 
CHN1                  0.054   chimerin (chimaerin) 1 isoform a 
CHN1                  0.054   chimerin (chimaerin) 1 isoform b 
ACAP3                 0.053   ArfGAP with coiled-coil, ankyrin repeat and PH doma...
ARHGAP12              0.052   Rho GTPase activating protein 12 
ACAP2                 0.052   centaurin, beta 2 
CHN2                  0.051   beta chimerin isoform 2 
CHN2                  0.051   beta chimerin isoform 1 
SNX26                 0.050   sorting nexin 26 
ARHGAP21              0.050   Rho GTPase activating protein 21 
GRLF1                 0.048   glucocorticoid receptor DNA binding factor 1 
ARHGAP23              0.048   Rho GTPase activating protein 23 
ARHGAP30              0.046   Rho GTPase activating protein 30 isoform 2 
ARHGAP30              0.046   Rho GTPase activating protein 30 isoform 1 
ARHGAP9               0.044   Rho GTPase activating protein 9 isoform 1 
ARHGAP9               0.044   Rho GTPase activating protein 9 isoform 3 
CDGAP                 0.044   Cdc42 GTPase-activating protein 
GMIP                  0.043   GEM interacting protein 
HMHA1                 0.042   minor histocompatibility antigen HA-1 
RACGAP1               0.041   Rac GTPase activating protein 1 
RACGAP1               0.041   Rac GTPase activating protein 1 
RACGAP1               0.041   Rac GTPase activating protein 1 
RICS                  0.040   Rho GTPase-activating protein isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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