Guide to the Human Genome
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Name: CNKSR3 Sequence: fasta or formatted (555aa) NCBI GI: 74316006
Description:

CNKSR family member 3

Referenced in:

Inositol Pathways
Additional Interaction Domain Families
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         25           2
 C cysteine            1.8         10           1
 D aspartate           5.0         28           2
 E glutamate           6.1         34           2
 F phenylalanine       2.7         15           1
 G glycine             6.1         34           2
 H histidine           2.0         11           1
 I isoleucine          4.7         26           2
 K lysine              7.2         40           3
 L leucine             9.9         55           3
 M methionine          1.6          9           1
 N asparagine          4.1         23           1
 P proline             7.9         44           4
 Q glutamine           4.0         22           2
 R arginine            5.8         32           4
 S serine              9.0         50           3
 T threonine           7.4         41           3
 V valine              6.1         34           2
 W tryptophan          1.3          7           1
 Y tyrosine            2.7         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CNKSR family member 3 
CNKSR2                0.500   connector enhancer of kinase suppressor of Ras 2 [Ho...
CNKSR1                0.141   connector enhancer of kinase suppressor of Ras 1 [H...
DGKD                  0.023   diacylglycerol kinase, delta 130kDa isoform 1 
DGKD                  0.023   diacylglycerol kinase, delta 130kDa isoform 2 
DGKH                  0.022   diacylglycerol kinase, eta isoform 2 
MAGI2                 0.019   membrane associated guanylate kinase, WW and PDZ dom...
PPP1R9A               0.018   protein phosphatase 1, regulatory (inhibitor) subuni...
MPDZ                  0.018   multiple PDZ domain protein 
INADL                 0.018   InaD-like 
SHANK2                0.017   SH3 and multiple ankyrin repeat domains 2 isoform 1...
SHANK3                0.015   SH3 and multiple ankyrin repeat domains 3 
GRIP2                 0.015   glutamate receptor interacting protein 2 
SAMD14                0.015   sterile alpha motif domain containing 14 
TNKS2                 0.014   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
C2orf71               0.013   hypothetical protein LOC388939 
PPFIBP1               0.013   PTPRF interacting protein binding protein 1 isoform ...
MAGI3                 0.013   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.013   membrane-associated guanylate kinase-related  3 iso...
SHANK1                0.012   SH3 and multiple ankyrin repeat domains 1 
MUC2                  0.011   mucin 2 precursor 
PDZD2                 0.011   PDZ domain containing 2 
BFAR                  0.009   bifunctional apoptosis regulator 
FRMPD2                0.009   FERM and PDZ domain containing 2 isoform 1 
FRMPD2                0.009   FERM and PDZ domain containing 2 isoform 4 
FRMPD2                0.009   FERM and PDZ domain containing 2 isoform 2 
FRMPD2                0.009   FERM and PDZ domain containing 2 isoform 3 
GRIP1                 0.009   glutamate receptor interacting protein 1 
SGMS1                 0.009   sphingomyelin synthase 1 
GIPC2                 0.009   PDZ domain protein GIPC2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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