Guide to the Human Genome
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Name: MFSD9 Sequence: fasta or formatted (474aa) NCBI GI: 217416366
Description:

major facilitator superfamily domain containing 9

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         44           2
 C cysteine            1.5          7           1
 D aspartate           2.1         10           1
 E glutamate           4.0         19           2
 F phenylalanine       4.4         21           2
 G glycine             9.5         45           2
 H histidine           1.9          9           1
 I isoleucine          4.2         20           2
 K lysine              3.4         16           2
 L leucine            16.5         78           4
 M methionine          2.3         11           1
 N asparagine          2.1         10           1
 P proline             3.8         18           2
 Q glutamine           2.1         10           1
 R arginine            4.9         23           2
 S serine              9.7         46           2
 T threonine           5.5         26           1
 V valine              9.3         44           2
 W tryptophan          1.3          6           1
 Y tyrosine            2.3         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   major facilitator superfamily domain containing 9 [... 
SLC22A18              0.082   tumor suppressing subtransferable candidate 5 [Homo...
SLC22A18              0.082   tumor suppressing subtransferable candidate 5 [Homo...
MFSD10                0.062   major facilitator superfamily domain containing 10 ...
MFSD10                0.062   major facilitator superfamily domain containing 10 ...
MFSD8                 0.039   major facilitator superfamily domain containing 8 [H...
C6orf192              0.037   hypothetical protein LOC116843 
HIAT1                 0.034   hippocampus abundant transcript 1 
HIATL1                0.032   hippocampus abundant transcript-like 1 
SLC46A1               0.030   proton-coupled folate transporter 
SLC16A4               0.013   solute carrier family 16, member 4 
SLC2A14               0.013   glucose transporter 14 
SLC46A3               0.011   solute carrier family 46, member 3 isoform a 
SLC46A3               0.011   solute carrier family 46, member 3 isoform b 
SLC16A13              0.011   monocarboxylate transporter 13 
SLC37A2               0.011   solute carrier family 37 (glycerol-3-phosphate tran...
SLC37A2               0.011   solute carrier family 37 (glycerol-3-phosphate trans...
GPR172A               0.010   G protein-coupled receptor 172A 
SLC2A4                0.009   glucose transporter 4 
SLC2A11               0.009   glucose transporter protein 10 isoform a 
SLC2A11               0.009   glucose transporter protein 10 isoform c 
SLC2A11               0.009   glucose transporter protein 10 isoform b 
TLN1                  0.007   talin 1 
SLC17A1               0.007   solute carrier family 17 (sodium phosphate), member...
KCNG4                 0.007   potassium voltage-gated channel, subfamily G, member...
CEP78                 0.007   centrosomal protein 78kDa isoform a 
CEP78                 0.007   centrosomal protein 78kDa isoform b 
SLC37A1               0.007   solute carrier family 37 member 1 
SLC2A2                0.006   solute carrier family 2 (facilitated glucose transpor...
GPR172B               0.006   G protein-coupled receptor 172B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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