BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] (430 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] 868 0.0 gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] 868 0.0 gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] 868 0.0 gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 52 1e-06 gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 48 1e-05 gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 48 1e-05 gi|239754474 PREDICTED: similar to mucin [Homo sapiens] 47 3e-05 gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 47 4e-05 gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 47 4e-05 gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 47 4e-05 gi|239757439 PREDICTED: hypothetical protein [Homo sapiens] 46 6e-05 gi|239751956 PREDICTED: hypothetical protein [Homo sapiens] 46 6e-05 gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo ... 46 6e-05 gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 45 1e-04 gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo ... 44 2e-04 gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 3e-04 gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 43 5e-04 gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 43 6e-04 gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 43 6e-04 gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 43 6e-04 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 43 6e-04 gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 43 6e-04 gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] 42 8e-04 gi|48762934 alpha 2 type I collagen [Homo sapiens] 42 0.001 gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] 42 0.001 gi|50962882 G patch domain containing 8 [Homo sapiens] 42 0.001 gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 42 0.001 gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001 gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 42 0.001 gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 42 0.001 >gi|169204521 PREDICTED: hypothetical protein [Homo sapiens] Length = 430 Score = 868 bits (2242), Expect = 0.0 Identities = 430/430 (100%), Positives = 430/430 (100%) Query: 1 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT 60 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT Sbjct: 1 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT 60 Query: 61 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML 120 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML Sbjct: 61 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML 120 Query: 121 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA Sbjct: 121 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 Query: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER Sbjct: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 Query: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE Sbjct: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 Query: 301 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA Sbjct: 301 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 Query: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD Sbjct: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 Query: 421 ILALKKGLPY 430 ILALKKGLPY Sbjct: 421 ILALKKGLPY 430 >gi|169205149 PREDICTED: hypothetical protein [Homo sapiens] Length = 430 Score = 868 bits (2242), Expect = 0.0 Identities = 430/430 (100%), Positives = 430/430 (100%) Query: 1 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT 60 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT Sbjct: 1 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT 60 Query: 61 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML 120 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML Sbjct: 61 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML 120 Query: 121 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA Sbjct: 121 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 Query: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER Sbjct: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 Query: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE Sbjct: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 Query: 301 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA Sbjct: 301 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 Query: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD Sbjct: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 Query: 421 ILALKKGLPY 430 ILALKKGLPY Sbjct: 421 ILALKKGLPY 430 >gi|169204400 PREDICTED: hypothetical protein [Homo sapiens] Length = 430 Score = 868 bits (2242), Expect = 0.0 Identities = 430/430 (100%), Positives = 430/430 (100%) Query: 1 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT 60 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT Sbjct: 1 MSNLRKRPSLDIPTALVSSSSISSCCWLRSSCGSLALPPPLPLLAGGGSSLLPTRLGWDT 60 Query: 61 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML 120 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML Sbjct: 61 GRSLLVLLGTVEGAGPATACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGML 120 Query: 121 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA Sbjct: 121 GWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 Query: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER Sbjct: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 Query: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE Sbjct: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 Query: 301 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA Sbjct: 301 GSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 Query: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD Sbjct: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 Query: 421 ILALKKGLPY 430 ILALKKGLPY Sbjct: 421 ILALKKGLPY 430 >gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] Length = 819 Score = 51.6 bits (122), Expect = 1e-06 Identities = 78/302 (25%), Positives = 113/302 (37%), Gaps = 53/302 (17%) Query: 109 GGALCGTAAGMLGWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWR 168 G C AAG G G G + + V L ++ +AAP LS + Sbjct: 5 GHRQCNQAAGRAGPGAPLGAALARTPVELAAE---------------SAAPALSAAAAGV 49 Query: 169 RRLYSSVLPVTASAAAAPSFSPTEESELEPFLG----------AGAGGERNREPGVLLCF 218 + L S + AAA + G AGAGG NR G Sbjct: 50 KILGSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAA 109 Query: 219 SAAPPDMVGSLERGERARIRERKGRE-GPSRPRRGLQGTAAGRVRADPDDASLSTDKPQR 277 +A + G RG + R R +K G +PR Q +AA + R Sbjct: 110 AAGTKSLGG---RGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSK-------------NR 153 Query: 278 GTGGPLGPAAAGAGTEAAAAHEEGSKAGD---SGAEPRGLAPHGPHPSCGERRPGGRWQQ 334 G G AAAG ++ ++ + AG SG +PR S G+ GR Q+ Sbjct: 154 GAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAK----SRGDEDKKGR-QR 208 Query: 335 RRRSHEGRARG-RHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQR 393 +S G+ RG R + AA A +RR G +P+ +R R G ++ + G+ Sbjct: 209 EAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRR--GQKAATGGKSRVGKS 266 Query: 394 RG 395 RG Sbjct: 267 RG 268 Score = 45.1 bits (105), Expect = 1e-04 Identities = 84/346 (24%), Positives = 125/346 (36%), Gaps = 50/346 (14%) Query: 79 ACSPGAAAAGGCWATWEVAVAVTVSSRWGSGGALCGTAAGMLGWGRERGRPGSSSAVALE 138 A GA + G + A A SR GG L + L ++ A A Sbjct: 461 AAEAGAESRGDKKQGRQKASAAGTKSR---GGGLKSHSGKNLWRRGQKAEAAGEKATAAG 517 Query: 139 SQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTASAAAAPSFSPTEESELEP 198 ++ R++ R V A R+ S +R+ A AA A S + Sbjct: 518 AKSRGRKQPRRQKPAVAGAKSRVGGSKSRQRQ--------KAVAAGATSHGGGGNKQ--- 566 Query: 199 FLGAGAGGERNREPG--VLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGT 256 G GG + R+ G + D ++ + R G G R+ GT Sbjct: 567 --SRGGGGNKPRQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKSRSGDGGKKAWRQKAAGT 624 Query: 257 AA---------GRVRADPDDASLSTDKPQRGTGGPLG----PAAAGAGTEAAAAHEEGSK 303 A G+ A + + +T RG+GG PAAAG+ + AAAA + ++ Sbjct: 625 GAKSRKKPWRRGQKDAAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAE 684 Query: 304 A------------GDSGAEPR-GLAP---HGPHPSCGERRPGGRWQQRRRSHEGRARGRH 347 A GD G G+ P G P G+ R GG + R G A+ R Sbjct: 685 ARKKPRRRRAKSRGDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSR---GSGGAKSRG 741 Query: 348 RVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQR 393 A + AA++ G + RR +RS +AV A GQ+ Sbjct: 742 SGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQK 787 Score = 38.5 bits (88), Expect = 0.012 Identities = 56/213 (26%), Positives = 81/213 (38%), Gaps = 29/213 (13%) Query: 203 GAGGERNREPGVLLCFSAAPPDMVGSLERGERARI----RERKGREGPSRPRRGLQGTAA 258 G GG++ R G +AA G + + A + R+++ R G +PRR A Sbjct: 319 GRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRG-KKPRRQKASAAG 377 Query: 259 GRVRADPDDASLSTDKPQRGTGGPL----GPAAAGAGTEAAAAHEEGSKAGDSGAEPRGL 314 + R D L K +RG G P AA GSK +PR Sbjct: 378 AKSRGGGDKKGLREAK-RRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSK------KPRRR 430 Query: 315 APHGPHPSCGERRPGGRWQQRRRSHEGR---------ARGRHRVEADAADAAPTAAARRA 365 P G+ R GG + RRR + R +RG + A AA T +R Sbjct: 431 GPKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASAAGT-KSRGG 489 Query: 366 GRARPRGRRHREHGTRSDA---RAVAAPGQRRG 395 G G+ G +++A +A AA + RG Sbjct: 490 GLKSHSGKNLWRRGQKAEAAGEKATAAGAKSRG 522 Score = 35.0 bits (79), Expect = 0.13 Identities = 73/334 (21%), Positives = 111/334 (33%), Gaps = 60/334 (17%) Query: 84 AAAAGGCWATWEVAVAVTVSSR-WGSGGALCGTAAGMLGWGRERGRPGSSSAVALESQMT 142 AAA G W + S+ G+G AAG+ G E+ P ++A +S+ Sbjct: 130 AAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEK--PQKAAAAGAKSRSG 187 Query: 143 LRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTASAAAAPSFSPTEESELEPFLGA 202 + ++R A R R+R S T P Sbjct: 188 KKPRRR-------GAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKP---------- 230 Query: 203 GAGGERNREPGVLLCFSAAPPDMVGSLERGERA----RIRERKGREGPSRPRRGLQGTAA 258 AGG ++R G P RG++A + R K R G + R QG A Sbjct: 231 AAGGAKSRRGG------GKKPQK--QRRRGQKAATGGKSRVGKSRGGGDKKLRR-QGQNA 281 Query: 259 GRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHG 318 A A+ + +KP G GP + G + + G G +PR Sbjct: 282 ALAGAKRRGAATAGEKPAAKGRGGRGPKSLGG---------QNPRWGRGGKKPRRRGQKA 332 Query: 319 PHPSCGERRPGGRWQQR--------RRSHEGRARGRHRVEADAADAAP----------TA 360 + + GG QQ+ R+ R + R +A AA A A Sbjct: 333 TKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREA 392 Query: 361 AARRAGRARPRGRRHREHGTRSDARAVAAPGQRR 394 R GR +PR + R ++ A G ++ Sbjct: 393 KRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKK 426 Score = 30.8 bits (68), Expect = 2.5 Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 25/195 (12%) Query: 205 GGERNREPGVLLCFSAAPPDMVGSLERGERARIRER-------------KGREGPSRPRR 251 GG++ R G AA G+ RG++ + R++ K G + RR Sbjct: 446 GGKKPRRRGQKARQKAAE---AGAESRGDKKQGRQKASAAGTKSRGGGLKSHSGKNLWRR 502 Query: 252 GLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAA-HEEGSKAGDSGAE 310 G + AAG S +P+R PA AGA + + + KA +GA Sbjct: 503 GQKAEAAGEKATAAGAKSRGRKQPRRQK-----PAVAGAKSRVGGSKSRQRQKAVAAGAT 557 Query: 311 PRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARP 370 G + G +P +W Q + + R G + A A T + R+G Sbjct: 558 SHGGGGNKQSRGGGGNKP-RQWGQTAAAAKTRGGGDKQPGWQKAAAGVTKS--RSGDGGK 614 Query: 371 RGRRHREHGTRSDAR 385 + R + GT + +R Sbjct: 615 KAWRQKAAGTGAKSR 629 Score = 29.6 bits (65), Expect = 5.5 Identities = 53/203 (26%), Positives = 70/203 (34%), Gaps = 42/203 (20%) Query: 99 AVTVSSRWGSGGALCGTAAGMLGWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAA 158 A W +G G+ W + SSA A Q RKK Sbjct: 640 AAAAEKAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKK----------- 688 Query: 159 PRLSLSIVWRRRLYSSVLPVTASAAAAPSFSPTEESELEPFLG--AGAGGERNREPGVLL 216 PR RRR S AA +P + +P LG G GG ++R G Sbjct: 689 PR-------RRRAKSR---GDGGQNAAVGINPWQRRGKKPRLGKSRGGGGAKSRGSG--- 735 Query: 217 CFSAAPPDMVGSLER-GERARIRERKG-------REGPSRPRRGLQGTAAGRVRADPDDA 268 A G+ R G++A + G R G ++ R G + AG +A A Sbjct: 736 --GAKSRGSGGAKSRSGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKA----A 789 Query: 269 SLSTDKPQR--GTGGPLGPAAAG 289 + KP R GG AAAG Sbjct: 790 AAGGKKPPRVKSRGGRGQKAAAG 812 >gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] Length = 1512 Score = 48.1 bits (113), Expect = 1e-05 Identities = 54/215 (25%), Positives = 76/215 (35%), Gaps = 27/215 (12%) Query: 217 CFSAAPPDMVGSLERGERARIRERKGREGPS--------------RPRRGLQGTAAGRVR 262 CFS PP V L RG+R +K R GP +P++ G A+ Sbjct: 80 CFSPGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGG 139 Query: 263 ADP----DDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHG 318 P +D S +++ G AA AG + GS A SG + RG Sbjct: 140 VTPLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSG---GSPASSSGTQRRGEGSER 196 Query: 319 PHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREH 378 P R GR ++R R H R R EA + + + + G Sbjct: 197 -RPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSG 255 Query: 379 GTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHS 413 G R A A ++ R D + S H+ R S Sbjct: 256 GRRKSASATSSSSSSRKDRD-----SKAHRSRTKS 285 >gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] Length = 1452 Score = 48.1 bits (113), Expect = 1e-05 Identities = 54/215 (25%), Positives = 76/215 (35%), Gaps = 27/215 (12%) Query: 217 CFSAAPPDMVGSLERGERARIRERKGREGPS--------------RPRRGLQGTAAGRVR 262 CFS PP V L RG+R +K R GP +P++ G A+ Sbjct: 80 CFSPGPPLEVKRLARGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQPQQDGGGGASSGGG 139 Query: 263 ADP----DDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHG 318 P +D S +++ G AA AG + GS A SG + RG Sbjct: 140 VTPLVEYEDVSSQSEQGLLLGGASAATAATAAGGTGGSG---GSPASSSGTQRRGEGSER 196 Query: 319 PHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREH 378 P R GR ++R R H R R EA + + + + G Sbjct: 197 -RPRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGEERAEVAKSGSSSSSG 255 Query: 379 GTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHS 413 G R A A ++ R D + S H+ R S Sbjct: 256 GRRKSASATSSSSSSRKDRD-----SKAHRSRTKS 285 >gi|239754474 PREDICTED: similar to mucin [Homo sapiens] Length = 417 Score = 47.0 bits (110), Expect = 3e-05 Identities = 69/281 (24%), Positives = 100/281 (35%), Gaps = 45/281 (16%) Query: 128 RPGSSSAVALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTASAAAAPS 187 R GS S+ + + Q R++ AAAP R ++ PV S+ Sbjct: 50 RRGSGSSPSADQQGAQDREEEA------AAAPAADQQRAQDREEEAAAAPVPTSSGHRTE 103 Query: 188 FSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPS 247 + + +P AG G+R S+ D +RA+ RE + P Sbjct: 104 KRKRLQLQCQP---AGGTGQRRGSR------SSPSADQ-------QRAQDREEEAAAAPV 147 Query: 248 RPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDS 307 RG + R R P +P GTG G ++ + + A E A Sbjct: 148 PTSRGHR--TEKRKRQQPQR------RPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAP 199 Query: 308 GAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEG----RARGRHRVEADAADAAPTAAAR 363 RG P + RP G QRR S + R + R E AA APT+ Sbjct: 200 APTSRGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGH 259 Query: 364 RAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSS 404 R + +P+ + R G GQRRG Y PS+ Sbjct: 260 RTEKRKPQQPQRRPAG---------GTGQRRG--SGYSPSA 289 Score = 37.0 bits (84), Expect = 0.035 Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 13/148 (8%) Query: 274 KPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQ 333 +P GTG G ++ + + A E A RG P +RRP G Sbjct: 219 RPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTG 278 Query: 334 QRRRS----HEGRARGRHRVEADAADAAPTAAARRAGR-------ARPRG--RRHREHGT 380 QRR S + + R E AA APT++ R + +P G + R G Sbjct: 279 QRRGSGYSPSADQQGAQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGC 338 Query: 381 RSDARAVAAPGQRRGDTEDYLPSSSPHQ 408 S A A + +P+SS H+ Sbjct: 339 SSSANQQGAQDREEEAAAAPVPTSSGHR 366 >gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo sapiens] Length = 355 Score = 46.6 bits (109), Expect = 4e-05 Identities = 57/187 (30%), Positives = 69/187 (36%), Gaps = 27/187 (14%) Query: 232 GERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAG 291 G AR R R+G RP G T A + P GT G A G+ Sbjct: 180 GRSARARTRRGPHRTRRPEPGPHHTGARQA------------GPLPGTRGRTRAAGTGSA 227 Query: 292 TEAAAAH-EEGSKAGDSGAEPRGLAPHGP----HPSCGERRPGGRWQQRRRSHEGRARGR 346 A H GS A + A GL+P G P RP R+ R + AR R Sbjct: 228 ARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRR 287 Query: 347 HRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYL----- 401 RV + + + A+RA R P R R G R ARA PG G L Sbjct: 288 CRVNWNQSSRPASHNAQRAARHIP--SRPRASGLR--ARAARRPGLDPGPAPYPLTPAAL 343 Query: 402 -PSSSPH 407 P +SPH Sbjct: 344 RPGTSPH 350 >gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo sapiens] Length = 355 Score = 46.6 bits (109), Expect = 4e-05 Identities = 57/187 (30%), Positives = 69/187 (36%), Gaps = 27/187 (14%) Query: 232 GERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAG 291 G AR R R+G RP G T A + P GT G A G+ Sbjct: 180 GRSARARTRRGPHRTRRPEPGPHHTGARQA------------GPLPGTRGRTRAAGTGSA 227 Query: 292 TEAAAAH-EEGSKAGDSGAEPRGLAPHGP----HPSCGERRPGGRWQQRRRSHEGRARGR 346 A H GS A + A GL+P G P RP R+ R + AR R Sbjct: 228 ARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRR 287 Query: 347 HRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYL----- 401 RV + + + A+RA R P R R G R ARA PG G L Sbjct: 288 CRVNWNQSSRPASHNAQRAARHIP--SRPRASGLR--ARAARRPGLDPGPAPYPLTPAAL 343 Query: 402 -PSSSPH 407 P +SPH Sbjct: 344 RPGTSPH 350 >gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo sapiens] Length = 355 Score = 46.6 bits (109), Expect = 4e-05 Identities = 57/187 (30%), Positives = 69/187 (36%), Gaps = 27/187 (14%) Query: 232 GERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAG 291 G AR R R+G RP G T A + P GT G A G+ Sbjct: 180 GRSARARTRRGPHRTRRPEPGPHHTGARQA------------GPLPGTRGRTRAAGTGSA 227 Query: 292 TEAAAAH-EEGSKAGDSGAEPRGLAPHGP----HPSCGERRPGGRWQQRRRSHEGRARGR 346 A H GS A + A GL+P G P RP R+ R + AR R Sbjct: 228 ARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLRFPPARPALSPSARRR 287 Query: 347 HRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYL----- 401 RV + + + A+RA R P R R G R ARA PG G L Sbjct: 288 CRVNWNQSSRPASHNAQRAARHIP--SRPRASGLR--ARAARRPGLDPGPAPYPLTPAAL 343 Query: 402 -PSSSPH 407 P +SPH Sbjct: 344 RPGTSPH 350 >gi|239757439 PREDICTED: hypothetical protein [Homo sapiens] Length = 243 Score = 46.2 bits (108), Expect = 6e-05 Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 39/208 (18%) Query: 209 NREPGVLLCFSAAPPDMVGSLE-RGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDD 267 N PG LL F P G E R R R R GRE P++P R RA D Sbjct: 46 NIHPG-LLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKP------PPRNRPRAAVDA 98 Query: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPH---------- 317 A+L+ P G AA A E+ + + S PH Sbjct: 99 ATLTPPAPSAVRSGR--SLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156 Query: 318 --GPHPS----CGER------RPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRA 365 GPHP+ G+ R GG W +RR S RG + A PT RR+ Sbjct: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGE-----ELRGAPPTLGPRRS 211 Query: 366 GRARPRGRRHREHGTRSDARAVAAPGQR 393 ++ R R G + R A PG R Sbjct: 212 QQSLTRIRLCL--GGKQKVRVPATPGLR 237 >gi|239751956 PREDICTED: hypothetical protein [Homo sapiens] Length = 243 Score = 46.2 bits (108), Expect = 6e-05 Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 39/208 (18%) Query: 209 NREPGVLLCFSAAPPDMVGSLE-RGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDD 267 N PG LL F P G E R R R R GRE P++P R RA D Sbjct: 46 NIHPG-LLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKP------PPRNRPRAAVDA 98 Query: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPH---------- 317 A+L+ P G AA A E+ + + S PH Sbjct: 99 ATLTPPAPSAVRSGR--SLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156 Query: 318 --GPHPS----CGER------RPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRA 365 GPHP+ G+ R GG W +RR S RG + A PT RR+ Sbjct: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGE-----ELRGAPPTLGPRRS 211 Query: 366 GRARPRGRRHREHGTRSDARAVAAPGQR 393 ++ R R G + R A PG R Sbjct: 212 QQSLTRIRLCL--GGKQKVRVPATPGLR 237 >gi|239746439 PREDICTED: hypothetical protein XP_002344222 [Homo sapiens] Length = 243 Score = 46.2 bits (108), Expect = 6e-05 Identities = 60/208 (28%), Positives = 75/208 (36%), Gaps = 39/208 (18%) Query: 209 NREPGVLLCFSAAPPDMVGSLE-RGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDD 267 N PG LL F P G E R R R R GRE P++P R RA D Sbjct: 46 NIHPG-LLSFHLQPETREGKREGRSRRLRSRRGAGREEPAKP------PPRNRPRAAVDA 98 Query: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPH---------- 317 A+L+ P G AA A E+ + + S PH Sbjct: 99 ATLTPPAPSAVRSGR--SLAACARVESWHFLPQSWRTAPSAGIAASCLPHPGQPFIEPPL 156 Query: 318 --GPHPS----CGER------RPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRA 365 GPHP+ G+ R GG W +RR S RG + A PT RR+ Sbjct: 157 PIGPHPATLPVAGQSGRGWPSRGGGHWAERRVSTSANGRGE-----ELRGAPPTLGPRRS 211 Query: 366 GRARPRGRRHREHGTRSDARAVAAPGQR 393 ++ R R G + R A PG R Sbjct: 212 QQSLTRIRLCL--GGKQKVRVPATPGLR 237 >gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapiens] Length = 674 Score = 45.4 bits (106), Expect = 1e-04 Identities = 34/128 (26%), Positives = 50/128 (39%), Gaps = 14/128 (10%) Query: 268 ASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERR 327 + ++T KP P P G A+A S + S A + S RR Sbjct: 349 SGVTTGKPP----APPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRR 404 Query: 328 PGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAV 387 GG ++ GRH + + + +RR R+R RGRRH G+R R Sbjct: 405 GGGYYRS----------GRHARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYS 454 Query: 388 AAPGQRRG 395 +P +R G Sbjct: 455 RSPARRGG 462 >gi|239743051 PREDICTED: hypothetical protein XP_002342747 [Homo sapiens] Length = 306 Score = 44.3 bits (103), Expect = 2e-04 Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 13/126 (10%) Query: 274 KPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQ 333 +P GTG G ++ + + A E A RG P +RRP G Sbjct: 42 QPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTG 101 Query: 334 QRRRSHEGRAR----GRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAA 389 QRR S + + R E AA APT++ R + +P+ + R A Sbjct: 102 QRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQ---------QPQCRPAAG 152 Query: 390 PGQRRG 395 GQRRG Sbjct: 153 TGQRRG 158 Score = 40.0 bits (92), Expect = 0.004 Identities = 58/240 (24%), Positives = 90/240 (37%), Gaps = 33/240 (13%) Query: 180 ASAAAAPSFSP--TEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERA-- 235 A+AA AP+ TE+ + + AGG R S++ D G+ +R E A Sbjct: 71 AAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSR----SSSSADQQGAQDREEEAAA 126 Query: 236 ---------RIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPA 286 R +RK ++ RP G G G + D + D+ + T P+ P Sbjct: 127 APAPTSSGHRTEKRKPQQPQCRPAAGT-GQRRGSGCSPSADQQRAQDREEEATAAPV-PT 184 Query: 287 AAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGR 346 ++G TE + + + RG S R+P G QRR S + + Sbjct: 185 SSGHRTEKRKRLQLQCQPAGGTGQRRGSR------SSPSRQPAGGTGQRRGSRSSPSADQ 238 Query: 347 HRVEADAADAAPTAAARRAGRARPRGRRHREHGT-RSDARAVAAPGQRRGDTEDYLPSSS 405 R + +AA + RP G + GT + GQRRG P+S+ Sbjct: 239 QRAQDREEEAAQP-------QRRPAGGTGQRRGTAAAPVPTTGGTGQRRGTAAAPAPTST 291 Score = 34.3 bits (77), Expect = 0.22 Identities = 36/158 (22%), Positives = 56/158 (35%), Gaps = 15/158 (9%) Query: 274 KPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQ 333 +P GTG G ++ + + A E A G P + RP Sbjct: 95 RPAGGTGQRRGSRSSSSADQQGAQDREEEAAAAPAPTSSGHRTEKRKPQQPQCRPAAGTG 154 Query: 334 QRRRS----HEGRARGRHRVEADAADAAPTAAARRAGR-------ARPRGRRHREHGTRS 382 QRR S + R + R E A PT++ R + +P G + G+RS Sbjct: 155 QRRGSGCSPSADQQRAQDREEEATAAPVPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSRS 214 Query: 383 --DARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAE 418 + GQRRG PS+ + + + A+ Sbjct: 215 SPSRQPAGGTGQRRGSRSS--PSADQQRAQDREEEAAQ 250 >gi|158854042 hypothetical protein LOC222183 [Homo sapiens] Length = 653 Score = 43.9 bits (102), Expect = 3e-04 Identities = 50/191 (26%), Positives = 64/191 (33%), Gaps = 13/191 (6%) Query: 230 ERGERARIRERKGREGPSRPRR-GLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAA 288 +R +R G G P+R G G +G P A DKP + AAA Sbjct: 292 QRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDKPSSPSPRVRDKAAA 351 Query: 289 GAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHR 348 A T A E S ++ RG G G RR R ++RRRS + R R Sbjct: 352 AAPTPPARGKESPSPRSAPSSQGRGGRAAG---GAGRRRR--RRRRRRRSRSSASAPRRR 406 Query: 349 VEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGDTEDYLPSSSPHQ 408 A P ++R RA R R PG G + + Sbjct: 407 GRRRPRPAPPRGSSRSLSRA-------RSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAK 459 Query: 409 LRPHSQLPAET 419 RP PA T Sbjct: 460 ERPPRARPAST 470 Score = 37.7 bits (86), Expect = 0.020 Identities = 52/201 (25%), Positives = 74/201 (36%), Gaps = 40/201 (19%) Query: 230 ERGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAG 289 +R + R+R+ R S+ +R + R P S + +G P+ + Sbjct: 212 DRSDSGSRRKRRHRSRSSKCKRKEKNKEKKR----PHTESPGRRSHRHSSGSSHSPSLSS 267 Query: 290 AGTEAAAAHEEGSKAGDSGAEP---RGLAPHGPHPSCGE-----RRPGGRWQQRRRSHEG 341 +++ + K D G + R P PS G +R GG Q R +H G Sbjct: 268 HYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQ-RSGAHGG 326 Query: 342 RARGRH-----------RVEADAADAAPTAAAR---------------RAGRARP-RGRR 374 R H RV AA AAPT AR R GRA GRR Sbjct: 327 RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRR 386 Query: 375 HREHGTRSDARAVAAPGQRRG 395 R R +R+ A+ +RRG Sbjct: 387 RRRRRRRRRSRSSASAPRRRG 407 >gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] Length = 480 Score = 43.1 bits (100), Expect = 5e-04 Identities = 80/292 (27%), Positives = 108/292 (36%), Gaps = 41/292 (14%) Query: 124 RERGRPGSSSAVALESQ---MTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTA 180 + RG +S + ++Q + LR K C++++ + P +L +R ++ PV Sbjct: 119 KNRGPSAGTSQLGKKTQCRSLFLRTKGLCALLLELPPRPPPNLQEGGQRAIFQRP-PVYL 177 Query: 181 SAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRER 240 P P +E G+ G R + L +AAP G AR+RE Sbjct: 178 GNKPTP---PRQE---------GSFGGRPKSQPPLPQETAAPAPQPGPT--APPARVREP 223 Query: 241 KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEE 300 EG SR R L+ AA R P +LS R G P GP G G +AAA Sbjct: 224 GRAEGASREPR-LRSRAA-RPPPAPGPGALSRASRSRAAGRP-GPGFHG-GEKAAAPRAP 279 Query: 301 GSKAG-DSGAEPRGLAPHGPHPSC-------------GERRPGGRWQQRRRSHEG---RA 343 G G + GA R P G+ G Q S G R Sbjct: 280 GGGGGRNPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRF 339 Query: 344 RGRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQRRG 395 R R + T A G A P GRRH E + RA + G RRG Sbjct: 340 CRRRRRRGGGGEGEGTHATH--GPASPPGRRHDEEVGAAVLRAGSGEGSRRG 389 >gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo sapiens] Length = 1818 Score = 42.7 bits (99), Expect = 6e-04 Identities = 57/216 (26%), Positives = 73/216 (33%), Gaps = 19/216 (8%) Query: 177 PVTASAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSL----ERG 232 P+ P E ++ P G G R + PP VGS+ E+G Sbjct: 1208 PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKG 1267 Query: 233 ERARIRER--KGREGPSRPR--RGLQGTAAGRVRADPDDASLST-DKPQRGTGGPLG-PA 286 E G G P+ RG +G A A P A D +G GP+G P Sbjct: 1268 EPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG 1327 Query: 287 AAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSC--------GERRPGGRWQQRRRS 338 G E A ++G GD G + P P PS G+R P G R Sbjct: 1328 DPGPPGEPGPAGQDGV-GGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQ 1386 Query: 339 HEGRARGRHRVEADAADAAPTAAARRAGRARPRGRR 374 E A+G E P AG+ P G R Sbjct: 1387 GEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLR 1422 >gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo sapiens] Length = 1767 Score = 42.7 bits (99), Expect = 6e-04 Identities = 57/216 (26%), Positives = 73/216 (33%), Gaps = 19/216 (8%) Query: 177 PVTASAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSL----ERG 232 P+ P E ++ P G G R + PP VGS+ E+G Sbjct: 1157 PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKG 1216 Query: 233 ERARIRER--KGREGPSRPR--RGLQGTAAGRVRADPDDASLST-DKPQRGTGGPLG-PA 286 E G G P+ RG +G A A P A D +G GP+G P Sbjct: 1217 EPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG 1276 Query: 287 AAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSC--------GERRPGGRWQQRRRS 338 G E A ++G GD G + P P PS G+R P G R Sbjct: 1277 DPGPPGEPGPAGQDGV-GGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQ 1335 Query: 339 HEGRARGRHRVEADAADAAPTAAARRAGRARPRGRR 374 E A+G E P AG+ P G R Sbjct: 1336 GEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLR 1371 >gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo sapiens] Length = 1806 Score = 42.7 bits (99), Expect = 6e-04 Identities = 57/216 (26%), Positives = 73/216 (33%), Gaps = 19/216 (8%) Query: 177 PVTASAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSL----ERG 232 P+ P E ++ P G G R + PP VGS+ E+G Sbjct: 1196 PIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKG 1255 Query: 233 ERARIRER--KGREGPSRPR--RGLQGTAAGRVRADPDDASLST-DKPQRGTGGPLG-PA 286 E G G P+ RG +G A A P A D +G GP+G P Sbjct: 1256 EPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFPG 1315 Query: 287 AAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSC--------GERRPGGRWQQRRRS 338 G E A ++G GD G + P P PS G+R P G R Sbjct: 1316 DPGPPGEPGPAGQDGV-GGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQ 1374 Query: 339 HEGRARGRHRVEADAADAAPTAAARRAGRARPRGRR 374 E A+G E P AG+ P G R Sbjct: 1375 GEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLR 1410 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 42.7 bits (99), Expect = 6e-04 Identities = 58/241 (24%), Positives = 82/241 (34%), Gaps = 26/241 (10%) Query: 128 RPGSSSAV-ALESQMTLRRKKRCSVVVVVAAAPRLSLSIVWRRRLYSSVLPVTASAAAAP 186 RP S S + L+ R++RC ++ VA A + P + AA+ Sbjct: 444 RPTSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASA----------PCAPAPAASG 493 Query: 187 SFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGP 246 EE E GAG G EP +A P G E + G P Sbjct: 494 RPPRAEELERRALAGAGGVGAAGAEPP-----NAGDPFKAGEAETNDTNGYSSGGGGHSP 548 Query: 247 SRPRRGLQGTAAGRVRADPDDASLSTDKPQ-----RGTGGPLGPAAAGAGTEAAAAHEEG 301 S G D +D + T+ + RG GG LG +G A G Sbjct: 549 SAD----SGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPG 604 Query: 302 SKAGDSGAE-PRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 + ++ A PR +P P P G PGG + + R R +D+ P Sbjct: 605 ATVDEAAAPGPRENSPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSKSGKPRR 664 Query: 361 A 361 A Sbjct: 665 A 665 >gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] Length = 2944 Score = 42.7 bits (99), Expect = 6e-04 Identities = 50/171 (29%), Positives = 65/171 (38%), Gaps = 20/171 (11%) Query: 230 ERGERARIRER--KGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLG-PA 286 ERGER ER +GR+GP GL GT P +S D+P G G G P Sbjct: 2059 ERGERGEKGERGEQGRDGPP----GLPGTPGP---PGPPGPKVSVDEPGPGLSGEQGPPG 2111 Query: 287 AAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGGRWQQRRRSHEGR---- 342 GA E + ++G K GD G P P + PG ++ EG+ Sbjct: 2112 LKGAKGEPGSNGDQGPK-GDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQ 2170 Query: 343 -ARGRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQ 392 RG D P A AG A P+G G + + PG+ Sbjct: 2171 GPRGPPGPVGGHGDPGPPGAPGLAGPAGPQG----PSGLKGEPGETGPPGR 2217 Score = 36.6 bits (83), Expect = 0.045 Identities = 34/106 (32%), Positives = 40/106 (37%), Gaps = 9/106 (8%) Query: 223 PDMVGSLERGERARIRERKGREGPSRPR--RGLQGTAAGRVRADPDDASLSTDKPQRGTG 280 P G + GE + RKG GPS P RG G R ++ DK RG Sbjct: 1349 PGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGDKGDRGER 1408 Query: 281 GPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGER 326 GP GP G A E G P+G P GP GE+ Sbjct: 1409 GPPGPGEGG-----IAPGEPGLPGLPGSPGPQG--PVGPPGKKGEK 1447 Score = 36.2 bits (82), Expect = 0.059 Identities = 43/179 (24%), Positives = 57/179 (31%), Gaps = 14/179 (7%) Query: 222 PPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGG 281 PP + G+ +G++ +G GP P G G A G +P L +G G Sbjct: 1390 PPGLPGTAMKGDKGD----RGERGPPGPGEG--GIAPG----EPGLPGLPGSPGPQGPVG 1439 Query: 282 PLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRG----LAPHGPHPSCGERRPGGRWQQRRR 337 P G +E A G PRG + P G G G +R Sbjct: 1440 PPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGP 1499 Query: 338 SHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAPGQRRGD 396 +RG V P GR +G R AVA P +GD Sbjct: 1500 PGPAGSRGLPGVAGRPGAKGPEGPPGPTGRQGEKGEPGRPGDPAVVGPAVAGPKGEKGD 1558 Score = 31.2 bits (69), Expect = 1.9 Identities = 55/225 (24%), Positives = 71/225 (31%), Gaps = 40/225 (17%) Query: 211 EPGVLLCFSAAPPDMVGSL----------ERGERA--RIRERKGREGPSRPRRGLQGTAA 258 EPG L PP + G+ +G+R I+ +G GP R + G G Sbjct: 2098 EPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGP-RGQDGNPGLPG 2156 Query: 259 GRVRADPD-----DASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKA--GDSGAEP 311 R A P+ P G G P P A G A G K G++G Sbjct: 2157 ERGMAGPEGKPGLQGPRGPPGPVGGHGDPGPPGAPGLAGPAGPQGPSGLKGEPGETGPPG 2216 Query: 312 RGL----------APHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAA 361 RGL P GP G + G Q + + A GR D Sbjct: 2217 RGLTGPTGAVGLPGPPGPSGLVGPQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGV 2276 Query: 362 ARRAGRARPRGRRHREHGTRSDARAV----------AAPGQRRGD 396 G P G + T + +AV APG GD Sbjct: 2277 PGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAKGEKGAPGGLAGD 2321 >gi|239758117 PREDICTED: hypothetical protein [Homo sapiens] Length = 465 Score = 42.4 bits (98), Expect = 8e-04 Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 24/180 (13%) Query: 227 GSLERGERARIRERKGR--EGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRGTGGPLG 284 G R ++A + K R EG RRG + AG SL K +RG G G Sbjct: 149 GKQPRRQKAAVAGAKSRGGEGKKPQRRGQKAATAGAKSRGGGVRSLGGKKMRRGQKGAAG 208 Query: 285 PAAAGAGTEAAAAHEEGSKAGDSGAE-PRGLAPHGPHPSCGERRPGGRWQQRRRSHEGRA 343 G G + ++ SK+G + P+ A G R + R+R + A Sbjct: 209 AKRCGGGKQPRRRGQKASKSGGVRCQTPQKAAAQGVK---------SRKKLRQRGQKAAA 259 Query: 344 RGRHRVEADAADAAPTAAARRAG---------RARPRGRRHREHGTRSDARAVAAPGQRR 394 G+ EA A + G +R RG++ G + +A AA G+RR Sbjct: 260 AGQ---EAAAGKTCGGGGEKHRGGGDKKPLRKNSRWRGQKAAAAGGKKPQKAAAAGGERR 316 >gi|48762934 alpha 2 type I collagen [Homo sapiens] Length = 1366 Score = 42.0 bits (97), Expect = 0.001 Identities = 60/214 (28%), Positives = 77/214 (35%), Gaps = 35/214 (16%) Query: 211 EPGVLLCFSAAPPDMVGSLERGER--ARIRERKGREGP-------SRPRRGLQGTAAGRV 261 EPGV+ A P L GER A I KG +G P R A G V Sbjct: 623 EPGVVGAVGTAGPSGPSGLP-GERGAAGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAV 681 Query: 262 RADPDDASLSTDKPQRGTGGPLGPAAA----------------GAGTEAAAAHEEGSKAG 305 A P A + D+ + G GP GPA G A AA + G+K G Sbjct: 682 GA-PGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAK-G 739 Query: 306 DSGAE-PRG----LAPHGPHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTA 360 + GA+ P+G + P GP + G P G +G G A P Sbjct: 740 ERGAKGPKGENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPG 799 Query: 361 AARRAGRARPRGRRHRE--HGTRSDARAVAAPGQ 392 + +G P G +E G R D V G+ Sbjct: 800 PSGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGE 833 >gi|29725624 collagen, type XXIII, alpha 1 [Homo sapiens] Length = 540 Score = 42.0 bits (97), Expect = 0.001 Identities = 80/310 (25%), Positives = 108/310 (34%), Gaps = 31/310 (10%) Query: 107 GSGGALCGTAAGMLGWGRERGRPGSSSAVALESQMTLRRKKRCSVVVVVAAA--PRLSLS 164 G G A G AAG G GR GS + AL +++ C ++ V AAA R++ Sbjct: 9 GGGDAGKGNAAGGGGGGRSATTAGSRAVSALCLLLSVGSAAACLLLGVQAAALQGRVAAL 68 Query: 165 IVWRRRLYSSVLPVTASAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPD 224 R L + P A A P +L+ G P +C PP Sbjct: 69 EEERELLRRAGPPGALDAWAEPHLERLLREKLD---GLAKIRTAREAPSECVC-PPGPPG 124 Query: 225 MVGSLERGERARIRERKGREGPSRP-----RRGLQGTAAGRVRADPDDASLSTDKPQRGT 279 G R + GR+G P + GL G + P D D+ Q G Sbjct: 125 RRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKG--EKGAPGDFGPRGDQGQDGA 182 Query: 280 GGPLG-PAAAGAGTEAAAAHEEGSKAGDSGAEPRG-------LAPHGPHPSCGERR-PGG 330 GP G P GA ++G + A P+G + P GP GE PG Sbjct: 183 AGPPGPPGPPGARGPPGDTGKDGPRGAQGPAGPKGEPGQDGEMGPKGPPGPKGEPGVPGK 242 Query: 331 RWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGR-RHREHGTRSDARAVAA 389 + S G + + P G P+G HR GT A A Sbjct: 243 KGDDGTPSQPGPPGPK----GEPGSMGPRGENGVDGAPGPKGEPGHR--GTDGAAGPRGA 296 Query: 390 PGQR--RGDT 397 PG + +GDT Sbjct: 297 PGLKGEQGDT 306 >gi|50962882 G patch domain containing 8 [Homo sapiens] Length = 1502 Score = 42.0 bits (97), Expect = 0.001 Identities = 52/223 (23%), Positives = 83/223 (37%), Gaps = 30/223 (13%) Query: 219 SAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGRVRADPDDASLSTDKPQRG 278 S+AP D ERG + E G P+ PRR + + R+ P + S K + G Sbjct: 721 SSAPADS----ERGPKP---EPPGSGSPAPPRRRRRAQDDSQRRSLPAEEGSSGKKDEGG 773 Query: 279 TG------------GPLGPAA----AGAGTEAAAAHEEGSKAGDSGAEPRGLAP-HGPHP 321 G G L P++ AG + ++H +GD ++ H P Sbjct: 774 GGSSSQDHGGRKHKGELPPSSCQRRAGTKRSSRSSHRSQPSSGDEDSDDASSHRLHQKSP 833 Query: 322 SC----GERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHRE 377 S E G R RS GR HR + ++ A++ ++ +R R Sbjct: 834 SQYSEEEEEEDSGSEHSRSRSRSGRRHSSHRSSRRSYSSSSDASSDQSCYSRQRSYSDDS 893 Query: 378 HGTRSDARAVAAPGQRRGDTEDYLPSSSPHQLRPHSQLPAETD 420 + SD + D DY +SS H+ + H ++ D Sbjct: 894 YSDYSDRSRRHSKRSHDSDDSDY--ASSKHRSKRHKYSSSDDD 934 Score = 35.8 bits (81), Expect = 0.077 Identities = 48/208 (23%), Positives = 80/208 (38%), Gaps = 31/208 (14%) Query: 212 PGVLLCFSAAPPDMVGS---------LERGERARIRERKGREGP----SRPRRGLQGTAA 258 P LL F+ A P + S L R + AR KG E P S + LQG Sbjct: 552 PSELLIFTKAEPSISYSCNPLYFDFKLSRNKDART---KGTEKPKDIGSSSKDHLQGLDP 608 Query: 259 GRVRADPDDASLSTDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHG 318 G + + +K R +GG + A+G+ E G G S E G + Sbjct: 609 GEPNKSKE---VGGEKIVRSSGGRMDAPASGSACSGLNKQEPGGSHG-SETEDTGRS--- 661 Query: 319 PHPSCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREH 378 PS ER ++++ H+ ++ + + +AD + + A + + R + +R + Sbjct: 662 -LPSKKERSGKSHRHKKKKKHKKSSKHKRKHKADTEEKSSKAESGEKSKKRKKRKRKKN- 719 Query: 379 GTRSDARAVAAPGQRRGDTEDYLPSSSP 406 ++ A RG + S SP Sbjct: 720 ------KSSAPADSERGPKPEPPGSGSP 741 Score = 29.6 bits (65), Expect = 5.5 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Query: 322 SCGERRPGGRWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTR 381 SC + R R R RS R+RGR R ++ + + + RR+ + +R Sbjct: 938 SCSQSRSRSRSHTRERS---RSRGRSR----SSSCSRSRSKRRSRSTTAHSWQRSRSYSR 990 Query: 382 SDARAVAAPGQRRGDTEDYLPSSSPHQ 408 +R+ +P QR G + SP + Sbjct: 991 DRSRSTRSPSQRSGSRKRSWGHESPEE 1017 >gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo sapiens] Length = 600 Score = 41.6 bits (96), Expect = 0.001 Identities = 51/186 (27%), Positives = 65/186 (34%), Gaps = 38/186 (20%) Query: 201 GAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGR 260 G GAGGER G + F RAR+ +GR G +QG R Sbjct: 250 GHGAGGERG---GAAVEF---------------RARVHCHRGRAGGQGGDFAVQGPRGRR 291 Query: 261 V--RADPDDASLSTDKPQRGTGGPLGPAAAGAGTE-AAAAHEEGSKAGDSGAEPRGLAPH 317 + + + D+ + G G P A G E A H G G Sbjct: 292 HGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRR------- 344 Query: 318 GPHPSCGERRPGGRWQQRRRSHEGRARGRH----RVEADAADAAPTAAARRAGRARPRGR 373 CG R G R Q R H G+A G VE P + RR+GR RG Sbjct: 345 -----CGHVRVGVREQASERGH-GQALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGI 398 Query: 374 RHREHG 379 + R+ G Sbjct: 399 QARDTG 404 Score = 30.8 bits (68), Expect = 2.5 Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 10/95 (10%) Query: 298 HEEGSKAGDSGAEPRGLAPHGPHPS---CGERRPGGRW---QQRRRSHEGRARGRHRVEA 351 H G +A D+G PR G H S GE P G+ Q+ R E + R EA Sbjct: 394 HGRGIQARDTGGGPRNRGQEGTHASGRHAGEGAPHGKLAGVQEERVPVEELLARQARGEA 453 Query: 352 DAADAAPTAAARRAGRARPRGRRHREHGTRSDARA 386 +A A R GR R R R G + RA Sbjct: 454 EARQGA--LGQVRGGRVRL--HRERREGLLARERA 484 >gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] Length = 510 Score = 41.6 bits (96), Expect = 0.001 Identities = 51/186 (27%), Positives = 65/186 (34%), Gaps = 38/186 (20%) Query: 201 GAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGR 260 G GAGGER G + F RAR+ +GR G +QG R Sbjct: 107 GHGAGGERG---GAAVEF---------------RARVHCHRGRAGGQGGDFAVQGPRGRR 148 Query: 261 V--RADPDDASLSTDKPQRGTGGPLGPAAAGAGTE-AAAAHEEGSKAGDSGAEPRGLAPH 317 + + + D+ + G G P A G E A H G G Sbjct: 149 HGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRR------- 201 Query: 318 GPHPSCGERRPGGRWQQRRRSHEGRARGRH----RVEADAADAAPTAAARRAGRARPRGR 373 CG R G R Q R H G+A G VE P + RR+GR RG Sbjct: 202 -----CGHVRVGVREQASERGH-GQALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGI 255 Query: 374 RHREHG 379 + R+ G Sbjct: 256 QARDTG 261 Score = 30.8 bits (68), Expect = 2.5 Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 10/95 (10%) Query: 298 HEEGSKAGDSGAEPRGLAPHGPHPS---CGERRPGGRW---QQRRRSHEGRARGRHRVEA 351 H G +A D+G PR G H S GE P G+ Q+ R E + R EA Sbjct: 251 HGRGIQARDTGGGPRNRGQEGTHASGRHAGEGAPHGKLAGVQEERVPVEELLARQARGEA 310 Query: 352 DAADAAPTAAARRAGRARPRGRRHREHGTRSDARA 386 +A A R GR R R R G + RA Sbjct: 311 EARQGA--LGQVRGGRVRL--HRERREGLLARERA 341 >gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo sapiens] Length = 457 Score = 41.6 bits (96), Expect = 0.001 Identities = 51/186 (27%), Positives = 65/186 (34%), Gaps = 38/186 (20%) Query: 201 GAGAGGERNREPGVLLCFSAAPPDMVGSLERGERARIRERKGREGPSRPRRGLQGTAAGR 260 G GAGGER G + F RAR+ +GR G +QG R Sbjct: 107 GHGAGGERG---GAAVEF---------------RARVHCHRGRAGGQGGDFAVQGPRGRR 148 Query: 261 V--RADPDDASLSTDKPQRGTGGPLGPAAAGAGTE-AAAAHEEGSKAGDSGAEPRGLAPH 317 + + + D+ + G G P A G E A H G G Sbjct: 149 HGGQGGGEQTAAVRDRHRDGVGAVAQPRAHGVQIEEGVAVHRAGGCRRGGGRR------- 201 Query: 318 GPHPSCGERRPGGRWQQRRRSHEGRARGRH----RVEADAADAAPTAAARRAGRARPRGR 373 CG R G R Q R H G+A G VE P + RR+GR RG Sbjct: 202 -----CGHVRVGVREQASERGH-GQALGGQDVLLEVEGQGGRGRPGQSLRRSGRGHGRGI 255 Query: 374 RHREHG 379 + R+ G Sbjct: 256 QARDTG 261 Score = 30.8 bits (68), Expect = 2.5 Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 10/95 (10%) Query: 298 HEEGSKAGDSGAEPRGLAPHGPHPS---CGERRPGGRW---QQRRRSHEGRARGRHRVEA 351 H G +A D+G PR G H S GE P G+ Q+ R E + R EA Sbjct: 251 HGRGIQARDTGGGPRNRGQEGTHASGRHAGEGAPHGKLAGVQEERVPVEELLARQARGEA 310 Query: 352 DAADAAPTAAARRAGRARPRGRRHREHGTRSDARA 386 +A A R GR R R R G + RA Sbjct: 311 EARQGA--LGQVRGGRVRL--HRERREGLLARERA 341 >gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo sapiens] Length = 1650 Score = 41.6 bits (96), Expect = 0.001 Identities = 56/217 (25%), Positives = 75/217 (34%), Gaps = 21/217 (9%) Query: 177 PVTASAAAAPSFSPTEESELEPFLGAGAGGERNREPGVLLCFSAAPPDMVGSL----ERG 232 P+ PS E ++ P G G R PP VG+L E+G Sbjct: 1068 PIGLQGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG 1127 Query: 233 ERAR-----IRERKGREGPSRPRRGLQGTAAGRVRADPDDASLST-DKPQRGTGGPLG-P 285 E I+ G +GP R RG +G + P T D +G GP+G P Sbjct: 1128 EPGESGSPGIQGEPGVKGP-RGERGEKGESGQPGEPGPPGPKGPTGDDGPKGNPGPVGFP 1186 Query: 286 AAAGAGTEAAAAHEEGSKAGDSGAE--------PRGLAPHGPHPSCGERRPGGRWQQRRR 337 G E ++G+K GD G + P +GP G+R P G R Sbjct: 1187 GDPGPPGEGGPRGQDGAK-GDRGEDGEPGQPGSPGPTGENGPPGPLGKRGPAGSPGSEGR 1245 Query: 338 SHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRR 374 A+G P A AG+ P G R Sbjct: 1246 QGGKGAKGDPGAIGAPGKTGPVGPAGPAGKPGPDGLR 1282 Score = 37.7 bits (86), Expect = 0.020 Identities = 51/204 (25%), Positives = 67/204 (32%), Gaps = 39/204 (19%) Query: 242 GREGPSRPR-----RGLQGTAAGR-------VRADPDDASLSTDKPQRGTGGPLGP---- 285 G++GP+ R RGL GTA G P A ++ G+GGP+GP Sbjct: 890 GKDGPAGLRGFPGERGLPGTAGGPGLKGNEGPSGPPGPAGSPGERGAAGSGGPIGPPGRP 949 Query: 286 ---AAAGAGTEAAAAHEEG--SKAGDSGAE-PRGL-APHGPHPSCGERRPGGRWQQRRRS 338 GA E E+G G G + P GL P GP GE G + Sbjct: 950 GPQGPPGAAGEKGVPGEKGPIGPTGRDGVQGPVGLPGPAGPPGVAGEDGDKGEVGDPGQK 1009 Query: 339 HEGRARGRHRVEADAADAAPTAAARRAGRARPRGRR--------HREHGTRS-------- 382 +G H P AG G R + GTR Sbjct: 1010 GTKGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPI 1069 Query: 383 DARAVAAPGQRRGDTEDYLPSSSP 406 + + P +G+T D P P Sbjct: 1070 GLQGLPGPSGEKGETGDVGPMGPP 1093 Score = 28.9 bits (63), Expect = 9.4 Identities = 71/270 (26%), Positives = 86/270 (31%), Gaps = 45/270 (16%) Query: 171 LYSSVLPVTASAAAAPSFSPTEESE---LEP-FLGAGAGGERNREPGVLLCFSAAPPDMV 226 L SS+LP AA P E+ E LEP L G G P L+ PP + Sbjct: 277 LESSLLPPLEEAAHGPRGLKGEKGEPAVLEPGMLVEGPPGPEG--PAGLI----GPPGIQ 330 Query: 227 GSL-------ERGE--RARIRERKGREGPSRP------RRGLQGTAAGRVRADPD-DASL 270 G+ ERG RA + G GP R G G G V A + A Sbjct: 331 GNPGPVGDPGERGPPGRAGLPGSDGAPGPPGTSLMLPFRFGSGGGDKGPVVAAQEAQAQA 390 Query: 271 STDKPQRGTGGPLGPAAAGAGTEAAAAHEEGSKAGDSGAEPRGLAPHGPHPSCGERRPGG 330 + + GP GP G+SG L P GP G P G Sbjct: 391 ILQQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESG----DLGPQGPRGPQGLTGPPG 446 Query: 331 RWQQRRRSHEGRARGRHRVEADAADAAPTAAARRAGRARPRGRRHREHGTRSDARAVAAP 390 + +R R+ ARG D G E G R D A P Sbjct: 447 KAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPG----------EKGHRGDTGAQGLP 496 Query: 391 GQ-----RRGDTEDYLPSSSPHQLRPHSQL 415 G RGD + P P + P L Sbjct: 497 GPPGEDGERGDDGEIGPRGLPGESGPRGLL 526 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.131 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,468,282 Number of Sequences: 37866 Number of extensions: 1178593 Number of successful extensions: 6722 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 625 Number of HSP's that attempted gapping in prelim test: 5741 Number of HSP's gapped (non-prelim): 1434 length of query: 430 length of database: 18,247,518 effective HSP length: 105 effective length of query: 325 effective length of database: 14,271,588 effective search space: 4638266100 effective search space used: 4638266100 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.