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Search of human proteins with 169204353
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169204353 PREDICTED: hypothetical protein [Homo sapiens]
(214 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169204353 PREDICTED: hypothetical protein [Homo sapiens] 480 e-136
gi|134031945 SCO-spondin [Homo sapiens] 41 9e-04
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 39 0.004
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 38 0.006
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 38 0.007
gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo ... 36 0.021
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 36 0.028
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 36 0.028
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.037
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.037
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ... 35 0.037
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 35 0.037
gi|145275213 coagulation factor XII precursor [Homo sapiens] 35 0.062
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 34 0.11
gi|108773804 Fraser syndrome 1 [Homo sapiens] 34 0.11
gi|116089331 human immunodeficiency virus type I enhancer bindin... 34 0.11
gi|167736355 mucin 4 isoform a [Homo sapiens] 33 0.14
gi|112382231 mucin 4 isoform e [Homo sapiens] 33 0.14
gi|112382233 mucin 4 isoform d [Homo sapiens] 33 0.14
gi|56237021 fibrillin 3 precursor [Homo sapiens] 33 0.14
gi|110611176 glutamate receptor, metabotropic 6 precursor [Homo ... 33 0.14
gi|239753382 PREDICTED: hypothetical protein [Homo sapiens] 33 0.18
gi|239747949 PREDICTED: hypothetical protein XP_002346484 [Homo ... 33 0.18
gi|239741844 PREDICTED: hypothetical protein XP_002342324 [Homo ... 33 0.18
gi|89191868 von Willebrand factor preproprotein [Homo sapiens] 33 0.24
gi|59894792 midkine [Homo sapiens] 33 0.24
gi|59894796 midkine [Homo sapiens] 33 0.24
gi|4505135 midkine [Homo sapiens] 33 0.24
gi|66529407 tensin [Homo sapiens] 33 0.24
gi|239757282 PREDICTED: similar to Fc fragment of IgG binding pr... 32 0.31
>gi|169204353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 214
Score = 480 bits (1235), Expect = e-136
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MAALCLRKGPLPLCPRPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRPQRSGP 60
MAALCLRKGPLPLCPRPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRPQRSGP
Sbjct: 1 MAALCLRKGPLPLCPRPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRPQRSGP 60
Query: 61 GGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHGALPQGQC 120
GGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHGALPQGQC
Sbjct: 61 GGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHGALPQGQC 120
Query: 121 SAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ 180
SAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ
Sbjct: 121 SAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ 180
Query: 181 GSCTGLPPLRGCLSRLVPGCPCPHLRQQDKGKWN 214
GSCTGLPPLRGCLSRLVPGCPCPHLRQQDKGKWN
Sbjct: 181 GSCTGLPPLRGCLSRLVPGCPCPHLRQQDKGKWN 214
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 40.8 bits (94), Expect = 9e-04
Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 24/114 (21%)
Query: 99 CSPSPHCSCGKGK-HGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPG-------PQLH 150
C P HC C + H P Q C++CS C GQ P H
Sbjct: 4111 CVPIGHCDCTDAQGHSWAPGSQHQ----------DACNNCS-CQAGQLSCTAQPCPPPTH 4159
Query: 151 CAWTVWS-WAVPSSASRACGDGHRRSTCQAQGSCTGLPPLRGCLSRLVPGCPCP 203
CAW+ WS W S S +CG ++S ++ S + P R S+ P CP P
Sbjct: 4160 CAWSHWSAW---SPCSHSCGPRGQQSRFRSSTSGSWAPECREEQSQSQP-CPQP 4209
Score = 35.0 bits (79), Expect = 0.048
Identities = 43/154 (27%), Positives = 60/154 (38%), Gaps = 29/154 (18%)
Query: 59 GPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHGALPQG 118
GP G + R R +G+ + R+ S ++Q C +P P P C G +
Sbjct: 4176 GPRGQQSRFRS-STSGSWAPECREEQS-----QSQPCPQPSCP-PLCL-----QGTRSRT 4223
Query: 119 QCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCA----WTVWS-WAVPSSASRACGDGH- 172
+WL+ C CS P G CA WT+WS W S +CG G+
Sbjct: 4224 LGDSWLQGE------CQRCSCTPEGVICEDTECAVPEAWTLWSSW---SDCPVSCGGGNQ 4274
Query: 173 -RRSTCQAQGSCTGLPPLRGCLSRLVPGCPCPHL 205
R C+A PP G ++ PCP L
Sbjct: 4275 VRTRACRAAAPHHRSPPCLGPDTQ-TRQQPCPGL 4307
Score = 34.7 bits (78), Expect = 0.062
Identities = 40/134 (29%), Positives = 49/134 (36%), Gaps = 31/134 (23%)
Query: 84 PSAQRHPRTQACSRPCSPSPHCSCGKGKHGA--LPQGQCSAWL--ELTMVTVP-CCHHCS 138
PS ++CS C C G H LP +C + EL V +CS
Sbjct: 2637 PSCLDPKANRSCSGHCVEGCRCPPGLLLHDTRCLPLSECPCLVGEELKWPGVSFLLGNCS 2696
Query: 139 HC----------PGGQPGPQLHCAWTVW-SWAVPSSASRACGDGHR---RSTCQAQGSCT 184
C PGG P P C W+ W SWA R+CG G R RS +
Sbjct: 2697 QCVCEKGELLCQPGGCPLP---CGWSAWSSWA---PCDRSCGSGVRARFRSPSNPPAAWG 2750
Query: 185 GLP------PLRGC 192
G P L+GC
Sbjct: 2751 GAPCEGDRQELQGC 2764
Score = 34.3 bits (77), Expect = 0.081
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 25/101 (24%)
Query: 83 GPSAQRHPRTQACSRPCSPS---------PHCSCGKGKHGALPQGQCSAWLELTMVTVPC 133
GP + P +++C+ P P+ +C+ G L + C+ +P
Sbjct: 3884 GPWSSWSPCSRSCTDPARPAWRSRTRLCLANCTMGD----PLQERPCN---------LPS 3930
Query: 134 CHHCSHCPGGQPGPQLHCAWTVWSWAVPSSASRACGDGHRR 174
C CPG G +C+WT W+ P SR+CG G +R
Sbjct: 3931 CTELPVCPGPGCGAG-NCSWTSWAPWEP--CSRSCGVGQQR 3968
Score = 33.9 bits (76), Expect = 0.11
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 13/57 (22%)
Query: 152 AWTVWSWAVPSSASRACGDGHRRSTCQAQGSCTGLPPLRGCLSRLVPGCPCPHLRQQ 208
AW +W P S S CG GH+ Q SC PP G G PCP Q+
Sbjct: 2557 AWAMWEAWGPCSVS--CGGGHQ----SRQRSCVDPPPKNG-------GAPCPGASQE 2600
Score = 33.1 bits (74), Expect = 0.18
Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 24/118 (20%)
Query: 10 PLPLCPRPSHGLKAMGGEG-----------SCQDDTESGALIFLPSDDAQ---PGKALRP 55
P PLCP GL+ GE C+D ++ + LP + K L
Sbjct: 2230 PAPLCP--GVGLRCASGECVLRGGPCDGVLDCEDGSDEEGCVLLPEGTGRFHSTAKTLAL 2287
Query: 56 QRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHG 113
+ PG W R G E + P Q P + +RP SP P + G HG
Sbjct: 2288 SSAQPGQLLH----WPREGLAETE--HWPPGQESPTSPTETRPVSPGP--ASGVPHHG 2337
Score = 30.0 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 25/64 (39%), Gaps = 13/64 (20%)
Query: 89 HPRTQACSRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQ 148
H R+QA PC P HC C H P S W E C C C G+P
Sbjct: 4970 HFRSQA--GPCVPEDHCECW---HLGRPHLPGSEWQE-------ACESCL-CLSGRPVCT 5016
Query: 149 LHCA 152
HC+
Sbjct: 5017 QHCS 5020
Score = 27.3 bits (59), Expect = 10.0
Identities = 30/110 (27%), Positives = 34/110 (30%), Gaps = 24/110 (21%)
Query: 116 PQGQCSAWLELTMVTVPCCHHCSHCPG-----GQPGPQLHCAWTVWS------------- 157
P GQC A + C ++C G GQ G Q T S
Sbjct: 401 PFGQCHAQVSPAEYHEACLF--AYCAGAMAGSGQEGRQQAVCATFASYVQACARRHIHIR 458
Query: 158 WAVPSSASRACGDGHRRSTCQA--QGSC--TGLPPLRGCLSRLVPGCPCP 203
W P R C G S C + SC G C V GC CP
Sbjct: 459 WRKPGFCERLCPGGQLYSDCVSLCPPSCEAVGQGEEESCREECVSGCECP 508
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 38.5 bits (88), Expect = 0.004
Identities = 39/115 (33%), Positives = 47/115 (40%), Gaps = 19/115 (16%)
Query: 6 LRKGPLPLCPRPSHGLKAMGGEGSCQDDTESGAL----IFLPS-------DDAQPGKALR 54
LRK L PR G + G +D E G+L + P+ A PG+ LR
Sbjct: 78 LRKSRARL-PRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQGAAPGRKLR 136
Query: 55 ------PQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSP 103
P RSGP G R G G RA A E Q+ G S + P A P P P
Sbjct: 137 GEPKTPPGRSGPSGGVRSGAG-HRAAAAEHQLGAGFSVRNGPGPPARLPPAPPGP 190
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 38.1 bits (87), Expect = 0.006
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 8/110 (7%)
Query: 15 PRPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRPQRSGPGGSERRGRGWGRAG 74
P + L+ E S D + L FL + + G G RG WGRAG
Sbjct: 281 PSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQGRGCDPGRGPTWGRAG 340
Query: 75 ALEEQVRQGPSAQR-HP--RTQACSRPCSPSP--HCSCGKGKHGALPQGQ 119
A + +GP R HP C R S SP CS + H P G+
Sbjct: 341 A---SLARGPQPDRTHPSAAVPVCPRSASASPLTPCSVTRSVHRCAPAGE 387
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 37.7 bits (86), Expect = 0.007
Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 19/115 (16%)
Query: 6 LRKGPLPLCPRPSHGLKAMGGEGSCQDDTESGAL----IFLPS-------DDAQPGKALR 54
LRK L PR G + G +D E G+L + P+ A PG+ LR
Sbjct: 125 LRKSRARL-PRTRPGREDAAVRGRNRDPAEPGSLRPTSLGFPARAGQGQVQGAAPGRRLR 183
Query: 55 ------PQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSP 103
P RSGP G R G G RA E Q+ G S + P A P P P
Sbjct: 184 GEPKTPPGRSGPSGGVRSGAG-HRAATAEHQLGAGFSVRNGPGPPARLPPAPPGP 237
>gi|239746609 PREDICTED: hypothetical protein XP_002343799 [Homo
sapiens]
Length = 245
Score = 36.2 bits (82), Expect = 0.021
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 52 ALRPQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGK 111
A RP+ GPGG RG W ++ R PSAQ PR R + P CG+G
Sbjct: 132 AARPRPPGPGG---RGSHWKIQPGVQRLPRPTPSAQ--PRPGPPERRRASRPLIGCGRGG 186
Query: 112 HGALPQGQCSAW 123
G + S W
Sbjct: 187 GGTWRRAADSRW 198
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 35.8 bits (81), Expect = 0.028
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 26/119 (21%)
Query: 7 RKGPLPLCPRPSHGLKAMGGE----GSCQD---DTESGALIFLPSDDAQPGKALRPQRSG 59
+K P P+ S + M G+ G+ ++ D +GAL F P D A P K+ +P
Sbjct: 607 KKKTAPTPPKRSSSFREMDGQPERRGAGEEEGRDISNGALAFTPLDTADPAKSPKPSNGA 666
Query: 60 --PGGSERRGRG--------WGRAGALE-------EQVRQGPSAQRHPRTQACSRPCSP 101
P G+ R G W ++ L E+ G S++R R +CS C P
Sbjct: 667 GVPNGALRESGGSGFRSPHLWKKSSTLTSSRLATGEEEGGGSSSKRFLR--SCSASCVP 723
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 35.8 bits (81), Expect = 0.028
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 26/119 (21%)
Query: 7 RKGPLPLCPRPSHGLKAMGGE----GSCQD---DTESGALIFLPSDDAQPGKALRPQRSG 59
+K P P+ S + M G+ G+ ++ D +GAL F P D A P K+ +P
Sbjct: 626 KKKTAPTPPKRSSSFREMDGQPERRGAGEEEGRDISNGALAFTPLDTADPAKSPKPSNGA 685
Query: 60 --PGGSERRGRG--------WGRAGALE-------EQVRQGPSAQRHPRTQACSRPCSP 101
P G+ R G W ++ L E+ G S++R R +CS C P
Sbjct: 686 GVPNGALRESGGSGFRSPHLWKKSSTLTSSRLATGEEEGGGSSSKRFLR--SCSASCVP 742
>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.037
Identities = 39/156 (25%), Positives = 48/156 (30%), Gaps = 36/156 (23%)
Query: 55 PQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKG---- 110
PQR PGG G +GP C+ P P+ H +CG G
Sbjct: 147 PQRPSPGGLR------GPRSLSGSSPWRGPQGSLCKSGLCCAHPVRPAGHVACGAGIWTR 200
Query: 111 -------------KHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAWTVWS 157
A G S W VPC H G +P + H T S
Sbjct: 201 AQAGPHKRAVGAAAGAAQSSGLFSKW-------VPCQPLSQHPTGPEPSSRPHALSTAAS 253
Query: 158 ----WAVPSSASRACGDGHRRSTCQAQGSCTGLPPL 189
W S + G G + T GS G+P L
Sbjct: 254 PRPCWGAGHSQTWRQGAGEAQGT--RGGSADGIPEL 287
>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.037
Identities = 39/156 (25%), Positives = 48/156 (30%), Gaps = 36/156 (23%)
Query: 55 PQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKG---- 110
PQR PGG G +GP C+ P P+ H +CG G
Sbjct: 147 PQRPSPGGLR------GPRSLSGSSPWRGPQGSLCKSGLCCAHPVRPAGHLACGAGIWTR 200
Query: 111 -------------KHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAWTVWS 157
A G S W VPC H G +P + H T S
Sbjct: 201 AQAGPHKRAVGAAAGAAQSSGLFSKW-------VPCQPLSQHPTGPEPSSRPHALSTAAS 253
Query: 158 ----WAVPSSASRACGDGHRRSTCQAQGSCTGLPPL 189
W S + G G + T GS G+P L
Sbjct: 254 PRPCWGAGHSQTWRQGAGEAQGT--RGGSADGIPEL 287
>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.037
Identities = 39/156 (25%), Positives = 48/156 (30%), Gaps = 36/156 (23%)
Query: 55 PQRSGPGGSERRGRGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKG---- 110
PQR PGG G +GP C+ P P+ H +CG G
Sbjct: 147 PQRPSPGGLR------GPRSLSGSSPWRGPQGSLCKSGLCCAHPVRPAGHVACGAGIWTR 200
Query: 111 -------------KHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAWTVWS 157
A G S W VPC H G +P + H T S
Sbjct: 201 AQAGPHKRAVGAAAGAAQSSGLFSKW-------VPCQPLSQHPTGPEPSSRPHALSTAAS 253
Query: 158 ----WAVPSSASRACGDGHRRSTCQAQGSCTGLPPL 189
W S + G G + T GS G+P L
Sbjct: 254 PRPCWGAGHSQTWRQGAGEAQGT--RGGSADGIPEL 287
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 35.4 bits (80), Expect = 0.037
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 44 SDDAQPG---KALRPQRSG-------PGGSERRGRGWGRAGALEEQVRQGP--SAQRHPR 91
++ +PG + RP RS P RGRG G G R P +A+R PR
Sbjct: 874 AESGEPGAREERPRPHRSHSKEAAGPPEARSERGRGPGPEGGRRHHRRGSPEEAAEREPR 933
Query: 92 TQACSRPCSPSPHCSCGKGKHGALPQG 118
R PS C+ KG+ A +G
Sbjct: 934 RHRAHRHQDPSKECAGAKGERRARHRG 960
>gi|145275213 coagulation factor XII precursor [Homo sapiens]
Length = 615
Score = 34.7 bits (78), Expect = 0.062
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 135 HHCSHCPGGQPGPQLHCAWTV-------WSWAV-PSSASRACGDGHRRSTCQAQGSCTGL 186
H C+H G+PGPQ CA T W + + P C + S CQ G+C +
Sbjct: 59 HKCTH--KGRPGPQPWCATTPNFDQDQRWGYCLEPKKVKDHCS---KHSPCQKGGTCVNM 113
Query: 187 PPLRGCL 193
P CL
Sbjct: 114 PSGPHCL 120
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 33.9 bits (76), Expect = 0.11
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 10/92 (10%)
Query: 17 PSHGLKAMGGE-GSCQDDTESGALIFLPSDDAQPGK---ALRPQRSGPGGSERRGRGWGR 72
P HG + G + G C + G L PG+ + PQ GG+ R R W
Sbjct: 179 PEHGTRQRGLQPGPCPCQQQGGYL-----GQKLPGRLSEGVGPQLQ-EGGNRRSARPWRL 232
Query: 73 AGALEEQVRQGPSAQRHPRTQACSRPCSPSPH 104
GA + G + P SRPC PH
Sbjct: 233 HGAQYQGPAPGSWVEEGPGAAMSSRPCCREPH 264
>gi|108773804 Fraser syndrome 1 [Homo sapiens]
Length = 4011
Score = 33.9 bits (76), Expect = 0.11
Identities = 39/141 (27%), Positives = 52/141 (36%), Gaps = 30/141 (21%)
Query: 89 HPRTQACSRPC----SPSP-HCS-CGKGKHG---------ALPQGQCSA------WLELT 127
H +AC C P+P HC+ C K + G +P G+C A +LE T
Sbjct: 649 HGVCKACHSSCLACMGPAPSHCTGCKKPEEGLQVEQLSDVGIPSGECLAQCRAHFYLEST 708
Query: 128 MVTVPCCHHCSHCPGGQPGPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQGSCTGL- 186
+ C C C G P C + + C DG+ +GSCT
Sbjct: 709 GICEACHQSCFRCAGKSPHNCTDCGPS--HVLLDGQCLSQCPDGY----FHQEGSCTECH 762
Query: 187 PPLRGCLSRLVPGC-PC-PHL 205
P R C L C C PH+
Sbjct: 763 PTCRQCHGPLESDCISCYPHI 783
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 33.9 bits (76), Expect = 0.11
Identities = 36/146 (24%), Positives = 49/146 (33%), Gaps = 15/146 (10%)
Query: 6 LRKGPLPLCPRPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRPQRSGPGGSER 65
L+ PL LCP + T+ G + P+ PG+A P RS P G
Sbjct: 2031 LQLSPLTLCPLGRELAPRAHVLSKLEGTTDPGLPRYSPTRRWSPGQAESPPRSAPPGK-- 2088
Query: 66 RGRGWGRAGALEEQV-RQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHGALPQGQCSAWL 124
W AG GP PR P +P PH + P+ S W
Sbjct: 2089 ----WALAGPGSPSAGEHGPGLGLDPRVLF---PPAPLPHKLLSRS-----PETCASPWQ 2136
Query: 125 ELTMVTVPCCHHCSHCPGGQPGPQLH 150
+ + C +H +P LH
Sbjct: 2137 KAESRSPSCSPGPAHPLSSRPFSALH 2162
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 33.5 bits (75), Expect = 0.14
Identities = 32/113 (28%), Positives = 38/113 (33%), Gaps = 44/113 (38%)
Query: 94 ACSRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAW 153
AC PC PS HC GKG C CP G HCA
Sbjct: 4949 ACEEPCFPSVHCVPGKG--------------------------CEACPPNLTGDGRHCA- 4981
Query: 154 TVWSWAVPSS---ASRACGDGHRRSTCQAQGSCTGLPPLRGCLSRLVPGCPCP 203
A+ SS +++C + C QG C + GC P C CP
Sbjct: 4982 -----ALGSSFLCQNQSCPVNY----CYNQGHCY-ISQTLGC----QPMCTCP 5020
>gi|112382231 mucin 4 isoform e [Homo sapiens]
Length = 1125
Score = 33.5 bits (75), Expect = 0.14
Identities = 32/113 (28%), Positives = 38/113 (33%), Gaps = 44/113 (38%)
Query: 94 ACSRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAW 153
AC PC PS HC GKG C CP G HCA
Sbjct: 790 ACEEPCFPSVHCVPGKG--------------------------CEACPPNLTGDGRHCA- 822
Query: 154 TVWSWAVPSS---ASRACGDGHRRSTCQAQGSCTGLPPLRGCLSRLVPGCPCP 203
A+ SS +++C + C QG C + GC P C CP
Sbjct: 823 -----ALGSSFLCQNQSCPVNY----CYNQGHCY-ISQTLGC----QPMCTCP 861
>gi|112382233 mucin 4 isoform d [Homo sapiens]
Length = 1176
Score = 33.5 bits (75), Expect = 0.14
Identities = 32/113 (28%), Positives = 38/113 (33%), Gaps = 44/113 (38%)
Query: 94 ACSRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPGPQLHCAW 153
AC PC PS HC GKG C CP G HCA
Sbjct: 841 ACEEPCFPSVHCVPGKG--------------------------CEACPPNLTGDGRHCA- 873
Query: 154 TVWSWAVPSS---ASRACGDGHRRSTCQAQGSCTGLPPLRGCLSRLVPGCPCP 203
A+ SS +++C + C QG C + GC P C CP
Sbjct: 874 -----ALGSSFLCQNQSCPVNY----CYNQGHCY-ISQTLGC----QPMCTCP 912
>gi|56237021 fibrillin 3 precursor [Homo sapiens]
Length = 2809
Score = 33.5 bits (75), Expect = 0.14
Identities = 32/112 (28%), Positives = 42/112 (37%), Gaps = 15/112 (13%)
Query: 50 GKALRPQRSGPGGSERRG---RGWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSP--- 103
G L P R P GS+ RG G G + + Q RH + C P+P
Sbjct: 372 GPPLGPARLNPHGSDARGIPSLGPGNSNIGTATLNQTIDICRHFTNLCLNGRCLPTPSSY 431
Query: 104 HCSCGKGKHGALPQGQCSAWLELT--------MVTVPCCHHCSHCPGGQPGP 147
C C G + +G+C E T V +P +HC PG Q P
Sbjct: 432 RCECNVG-YTQDVRGECIDVDECTSSPCHHGDCVNIPGTYHCRCYPGFQATP 482
>gi|110611176 glutamate receptor, metabotropic 6 precursor [Homo
sapiens]
Length = 877
Score = 33.5 bits (75), Expect = 0.14
Identities = 34/147 (23%), Positives = 46/147 (31%), Gaps = 29/147 (19%)
Query: 3 ALCLRKGPLPLCP--RPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRPQRSGP 60
ALC G LCP P+ G + + + + +G + + PG+ Q
Sbjct: 421 ALC--PGHTGLCPAMEPTDGRMLLQYIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQAT 478
Query: 61 GGSERRGR-----GWGRAGALEEQVRQGPSAQRHPRTQACSRPCSPSPHCSCGKGKHGAL 115
GS G W L+ + Q + CS PC P KG
Sbjct: 479 NGSASSGGYQAVGQWAETLRLDVEALQWSGDPHEVPSSLCSLPCGPGERKKMVKG----- 533
Query: 116 PQGQCSAWLELTMVTVPCCHHCSHCPG 142
VPCC HC C G
Sbjct: 534 ---------------VPCCWHCEACDG 545
>gi|239753382 PREDICTED: hypothetical protein [Homo sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.18
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 96 SRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPG-PQLHCAWT 154
S CS SP +C H LP G C+ VP C+ GG P P+ C
Sbjct: 52 SNQCSLSPLFTCNVHLHNTLP-GSCAPMARPDSRGVPEA-ACAQARGGSPKLPEQPCRGR 109
Query: 155 VWSWAVPSSASRACGDGHRRSTCQAQGSCTGLPP 188
W + R G G +S+CQ G+ P
Sbjct: 110 GACWRLGGRQLRP-GGGKVQSSCQGSGAAFSPAP 142
>gi|239747949 PREDICTED: hypothetical protein XP_002346484 [Homo
sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.18
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 96 SRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPG-PQLHCAWT 154
S CS SP +C H LP G C+ VP C+ GG P P+ C
Sbjct: 52 SNQCSLSPLFTCNVHLHNTLP-GSCAPMARPDSRGVPEA-ACAQARGGSPKLPEQPCRGR 109
Query: 155 VWSWAVPSSASRACGDGHRRSTCQAQGSCTGLPP 188
W + R G G +S+CQ G+ P
Sbjct: 110 GACWRLGGRQLRP-GGGKVQSSCQGSGAAFSPAP 142
>gi|239741844 PREDICTED: hypothetical protein XP_002342324 [Homo
sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.18
Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Query: 96 SRPCSPSPHCSCGKGKHGALPQGQCSAWLELTMVTVPCCHHCSHCPGGQPG-PQLHCAWT 154
S CS SP +C H LP G C+ VP C+ GG P P+ C
Sbjct: 52 SNQCSLSPLFTCNVHLHNTLP-GSCAPMARPDSRGVPEA-ACAQARGGSPKLPEQPCRGR 109
Query: 155 VWSWAVPSSASRACGDGHRRSTCQAQGSCTGLPP 188
W + R G G +S+CQ G+ P
Sbjct: 110 GACWRLGGRQLRP-GGGKVQSSCQGSGAAFSPAP 142
>gi|89191868 von Willebrand factor preproprotein [Homo sapiens]
Length = 2813
Score = 32.7 bits (73), Expect = 0.24
Identities = 36/148 (24%), Positives = 48/148 (32%), Gaps = 34/148 (22%)
Query: 93 QACSRPCSPSPHC--SCGKGKHGALPQGQ----------CSAWLELTMVTVPCCHHCSHC 140
Q C R PS C S G+ + G Q Q C ++ C C
Sbjct: 198 QWCERASPPSSSCNISSGEMQKGLWEQCQLLKSTSVFARCHPLVDPEPFVALCEKTLCEC 257
Query: 141 PGGQPGPQLHCA---------------WTVWSWAVPSSASRACGDG--HRRSTCQAQGSC 183
GG L CA ++ W S+ S C G +R+ +C
Sbjct: 258 AGG-----LECACPALLEYARTCAQEGMVLYGWTDHSACSPVCPAGMEYRQCVSPCARTC 312
Query: 184 TGLPPLRGCLSRLVPGCPCPHLRQQDKG 211
L C R V GC CP + D+G
Sbjct: 313 QSLHINEMCQERCVDGCSCPEGQLLDEG 340
>gi|59894792 midkine [Homo sapiens]
Length = 143
Score = 32.7 bits (73), Expect = 0.24
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 146 GPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ 180
GP CA W+W + +S+ CG G R TC AQ
Sbjct: 32 GPGSECA--EWAWGPCTPSSKDCGVGFREGTCGAQ 64
>gi|59894796 midkine [Homo sapiens]
Length = 143
Score = 32.7 bits (73), Expect = 0.24
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 146 GPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ 180
GP CA W+W + +S+ CG G R TC AQ
Sbjct: 32 GPGSECA--EWAWGPCTPSSKDCGVGFREGTCGAQ 64
>gi|4505135 midkine [Homo sapiens]
Length = 143
Score = 32.7 bits (73), Expect = 0.24
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 146 GPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ 180
GP CA W+W + +S+ CG G R TC AQ
Sbjct: 32 GPGSECA--EWAWGPCTPSSKDCGVGFREGTCGAQ 64
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 32.7 bits (73), Expect = 0.24
Identities = 28/93 (30%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 7 RKGPLPLCPRPSHGLKAMGGEGSCQDDTESGALIFLPSDDAQPGKALRP---QRSGPGGS 63
R P PL P L S Q+ +S + + D +P A P +S PG
Sbjct: 679 RPSPQPLAETPIPSLPEFPRAASQQEIEQSIETLNMLMLDLEPASAAAPLHKSQSVPGA- 737
Query: 64 ERRGRGWGRAGALEEQVRQGPSAQRHPRTQACS 96
W A L Q G S Q HP TQ+ S
Sbjct: 738 ------WPGASPLSSQPLSGSSRQSHPLTQSRS 764
>gi|239757282 PREDICTED: similar to Fc fragment of IgG binding protein
[Homo sapiens]
Length = 1403
Score = 32.3 bits (72), Expect = 0.31
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Query: 158 WAVPSSASRACGDGHRRSTCQ--AQGSCTGLPPLRGCLSRLVPGCPC 202
W S C S C QGSC L L GC +R GC C
Sbjct: 1111 WRTDSFCPLHCPAHSHYSICTRTCQGSCAALSGLTGCTTRCFEGCEC 1157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.488
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,518,665
Number of Sequences: 37866
Number of extensions: 765871
Number of successful extensions: 3383
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 3141
Number of HSP's gapped (non-prelim): 471
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.