Guide to the Human Genome
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Name: GRM6 Sequence: fasta or formatted (877aa) NCBI GI: 110611176
Description:

glutamate receptor, metabotropic 6 precursor

Referenced in:

Glutamate

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         90           2
 C cysteine            2.5         22           2
 D aspartate           3.8         33           2
 E glutamate           5.4         47           2
 F phenylalanine       3.8         33           2
 G glycine             8.1         71           2
 H histidine           1.5         13           1
 I isoleucine          5.0         44           3
 K lysine              2.9         25           2
 L leucine             9.5         83           3
 M methionine          2.1         18           1
 N asparagine          2.5         22           2
 P proline             6.4         56           3
 Q glutamine           3.6         32           1
 R arginine            7.0         61           2
 S serine              7.2         63           2
 T threonine           6.3         55           3
 V valine              7.9         69           2
 W tryptophan          1.5         13           1
 Y tyrosine            3.1         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutamate receptor, metabotropic 6 precursor 
GRM8                  0.705   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.705   glutamate receptor, metabotropic 8 isoform a precur...
GRM4                  0.704   glutamate receptor, metabotropic 4 
GRM7                  0.686   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.686   glutamate receptor, metabotropic 7 isoform a precurso...
GRM3                  0.407   glutamate receptor, metabotropic 3 precursor 
GRM2                  0.400   glutamate receptor, metabotropic 2 isoform a precurs...
GRM1                  0.349   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.349   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM5                  0.335   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.335   glutamate receptor, metabotropic 5 isoform b precurso...
CASR                  0.220   calcium-sensing receptor 
GPRC6A                0.125   G protein-coupled receptor, family C, group 6, memb...
TAS1R2                0.116   taste receptor, type 1, member 2 
TAS1R1                0.114   sweet taste receptor T1r isoform b 
TAS1R3                0.108   taste receptor, type 1, member 3 
GRM2                  0.101   glutamate receptor, metabotropic 2 isoform b 
TAS1R1                0.056   sweet taste receptor T1r isoform c 
TAS1R1                0.054   sweet taste receptor T1r isoform a 
GABBR2                0.020   G protein-coupled receptor 51 
GABBR1                0.016   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.016   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.016   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GRIN1                 0.016   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.016   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.016   NMDA receptor 1 isoform NR1-2 precursor 
TAS1R1                0.014   sweet taste receptor T1r isoform d 
GPRC5B                0.012   G protein-coupled receptor, family C, group 5, member...
GPR156                0.009   G protein-coupled receptor 156 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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