Guide to the Human Genome
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Name: LOC100133944 Sequence: fasta or formatted (1403aa) NCBI GI: 239757282
Description:

PREDICTED: similar to Fc fragment of IgG binding protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9        125           2
 C cysteine            8.1        114           1
 D aspartate           5.0         70           2
 E glutamate           4.5         63           2
 F phenylalanine       2.9         41           2
 G glycine            11.8        165           3
 H histidine           2.7         38           1
 I isoleucine          1.6         22           1
 K lysine              2.1         29           1
 L leucine             8.1        114           2
 M methionine          0.6          9           1
 N asparagine          3.1         44           2
 P proline             7.2        101           2
 Q glutamine           4.6         65           2
 R arginine            4.1         58           2
 S serine              6.6         92           4
 T threonine           5.3         75           3
 V valine              8.3        117           3
 W tryptophan          1.9         27           1
 Y tyrosine            2.4         34           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Fc fragment of IgG binding pr... 
LOC100290309          0.965   PREDICTED: hypothetical protein XP_002348012 
FCGBP                 0.965   Fc fragment of IgG binding protein 
LOC100293676          0.242   PREDICTED: similar to Fc fragment of IgG binding pr...
TECTA                 0.235   tectorin alpha precursor 
ZAN                   0.220   zonadhesin isoform 3 
ZAN                   0.220   zonadhesin isoform 6 
LOC100293643          0.173   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100132635          0.112   PREDICTED: similar to mucin 5, partial 
SSPO                  0.110   SCO-spondin 
MUC5B                 0.110   mucin 5, subtype B, tracheobronchial 
MUC5AC                0.107   mucin 5AC 
VWF                   0.094   von Willebrand factor preproprotein 
MUC2                  0.093   mucin 2 precursor 
C12orf64              0.092   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.092   PREDICTED: chromosome 12 open reading frame 64 [Hom...
C12orf64              0.092   PREDICTED: hypothetical protein LOC283310 
OTOG                  0.090   PREDICTED: otogelin isoform 1 
OTOG                  0.090   PREDICTED: otogelin isoform 2 
OTOG                  0.090   PREDICTED: otogelin isoform 2 
OTOG                  0.090   PREDICTED: otogelin isoform 1 
OTOG                  0.090   PREDICTED: otogelin isoform 2 
OTOG                  0.090   PREDICTED: otogelin isoform 1 
MUC6                  0.085   mucin 6, gastric 
KCP                   0.061   cysteine rich BMP regulator 2 isoform 1 
LOC100294420          0.060   PREDICTED: similar to mucin 2 
BMPER                 0.053   BMP-binding endothelial regulator precursor protein ...
LOC100291118          0.040   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.040   PREDICTED: hypothetical protein XP_002343203 
LOC100293409          0.036   PREDICTED: similar to Mucin-19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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