Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169204182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169204182 PREDICTED: hypothetical protein [Homo sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169204182 PREDICTED: hypothetical protein [Homo sapiens] 472 e-133
gi|169204828 PREDICTED: hypothetical protein [Homo sapiens] 464 e-131
gi|169205567 PREDICTED: hypothetical protein [Homo sapiens] 464 e-131
gi|110611906 solute carrier family 34 (sodium phosphate), member... 43 2e-04
gi|122937285 immunoglobulin superfamily 5 like [Homo sapiens] 43 2e-04
gi|27735107 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [H... 42 3e-04
gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo sa... 42 5e-04
gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho... 40 0.001
gi|123173777 keratin associated protein 5-8 [Homo sapiens] 40 0.002
gi|60279697 keratin associated protein 5-7 [Homo sapiens] 39 0.003
gi|13994372 keratin associated protein 17-1 [Homo sapiens] 39 0.005
gi|60099478 keratin associated protein 5-6 [Homo sapiens] 39 0.005
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 38 0.006
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 38 0.006
gi|39752687 hypothetical protein LOC375791 [Homo sapiens] 38 0.008
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 38 0.008
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 37 0.010
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 37 0.010
gi|60593040 keratin associated protein 5-10 [Homo sapiens] 37 0.013
gi|53292629 keratin associated protein 5-11 [Homo sapiens] 37 0.017
gi|60593036 keratin associated protein 5-3 [Homo sapiens] 36 0.023
gi|29294617 sweet taste receptor T1r isoform a [Homo sapiens] 36 0.029
gi|118572608 keratin associated protein 4-5 [Homo sapiens] 36 0.029
gi|239750462 PREDICTED: similar to hCG2033802 [Homo sapiens] 35 0.038
gi|51972220 keratin associated protein 5-2 [Homo sapiens] 35 0.038
gi|21361405 regulator of G-protein signalling 17 [Homo sapiens] 35 0.050
gi|13654235 regulator of G-protein signaling 20 isoform b [Homo ... 35 0.050
gi|41281805 regulator of G-protein signaling 20 isoform a [Homo ... 35 0.050
gi|134244291 G-protein coupled receptor 37 like 1 [Homo sapiens] 35 0.050
gi|4502873 chloride channel 6 isoform ClC-6a [Homo sapiens] 35 0.066
>gi|169204182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 220
Score = 472 bits (1214), Expect = e-133
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP
Sbjct: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
Query: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV
Sbjct: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
Query: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS
Sbjct: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
Query: 181 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 220
PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA
Sbjct: 181 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 220
>gi|169204828 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 464 bits (1193), Expect = e-131
Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 1/220 (0%)
Query: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP
Sbjct: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
Query: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV
Sbjct: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
Query: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCC CCCCCCCWCCSCLGGISSS
Sbjct: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCC-CCCCCCCWCCSCLGGISSS 179
Query: 181 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 220
PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA
Sbjct: 180 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
>gi|169205567 PREDICTED: hypothetical protein [Homo sapiens]
Length = 219
Score = 464 bits (1193), Expect = e-131
Identities = 219/220 (99%), Positives = 219/220 (99%), Gaps = 1/220 (0%)
Query: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP
Sbjct: 1 MPPEPAYGSKLIAGRSQLPSPRPLSFHEESFLLLPTHYPRDPLLGSASAGTLPCLARELP 60
Query: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV
Sbjct: 61 LSGRVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPLRSTQSTV 120
Query: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCC CCCCCCCWCCSCLGGISSS
Sbjct: 121 FMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCC-CCCCCCCWCCSCLGGISSS 179
Query: 181 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 220
PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA
Sbjct: 180 PSSVRMQHFFFQSCNNPSLRFSSTPSFSALQPLLSSILPA 219
>gi|110611906 solute carrier family 34 (sodium phosphate), member 2
[Homo sapiens]
Length = 690
Score = 43.1 bits (100), Expect = 2e-04
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 145 WDGSAGPCPGC----CCCCCCCCCCCCCWCCSC 173
WD GC CCCCC CC CC C C
Sbjct: 603 WDAVVSKFTGCFQMRCCCCCRVCCRACCLLCGC 635
>gi|122937285 immunoglobulin superfamily 5 like [Homo sapiens]
Length = 407
Score = 42.7 bits (99), Expect = 2e-04
Identities = 53/186 (28%), Positives = 72/186 (38%), Gaps = 31/186 (16%)
Query: 6 AYGSKLIAGRSQLPSPRPLSFHEE--SFLLLPTHYPRDPLLGSASAGTLPCLARELPLSG 63
AY + + G +PS + E LP+H+ R LP ++ EL L
Sbjct: 134 AYLTVQVMGELFIPSVNLVVAENEPCEVTCLPSHWTR-----------LPDISWELGLLV 182
Query: 64 RVGGAAEKPVPVRLRVRLVISAFQPWSCGHRKSISLPSAITTVKYMYLPL------RSTQ 117
P P L+ + I A P S G ++ ++ K + L + T
Sbjct: 183 SHSSYYFVPEPSDLQSAVSILALTPQSNGTLTCVATWKSLKARKSATVNLTVIRCPQDTG 242
Query: 118 STVFMLEKCSSLSLTGGSRLATAGPLGWDGSAGPC---PGCC----CCCC---CCCCCCC 167
+ + SSL G S L T G +G G AG P C CCCC CC C CC
Sbjct: 243 GGINIPGVLSSLPSLGFS-LPTWGKVGL-GLAGTMLLTPTCTLTIRCCCCRRRCCGCNCC 300
Query: 168 CWCCSC 173
C CC C
Sbjct: 301 CRCCFC 306
Score = 41.2 bits (95), Expect = 7e-04
Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 3/20 (15%)
Query: 155 CCC---CCCCCCCCCCCWCC 171
CCC CC C CCC CC+CC
Sbjct: 288 CCCRRRCCGCNCCCRCCFCC 307
Score = 33.9 bits (76), Expect = 0.11
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 152 CPGCCCCCCCCCCC 165
C GC CCC CC CC
Sbjct: 294 CCGCNCCCRCCFCC 307
>gi|27735107 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [Homo
sapiens]
Length = 189
Score = 42.4 bits (98), Expect = 3e-04
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 155 CCCCCCCCCCCCCCWCCSCL 174
C CCC CCCCC+CC L
Sbjct: 131 CTLLTCCCFCCCCCFCCGAL 150
Score = 38.5 bits (88), Expect = 0.005
Identities = 11/17 (64%), Positives = 11/17 (64%)
Query: 152 CPGCCCCCCCCCCCCCC 168
C CCC CCCCC CC
Sbjct: 131 CTLLTCCCFCCCCCFCC 147
Score = 36.6 bits (83), Expect = 0.017
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 158 CCCCCCCCCCCWCCSCLGGISSSP 181
C CCC CC CC C G + P
Sbjct: 131 CTLLTCCCFCCCCCFCCGALKPPP 154
>gi|45504382 DnaJ (Hsp40) homolog, subfamily C, member 5 [Homo
sapiens]
Length = 198
Score = 41.6 bits (96), Expect = 5e-04
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 154 GCCCCCCCCCCCCCCWCCSC 173
G CC CCCC CCC+ C C
Sbjct: 114 GLLTCCYCCCCLCCCFNCCC 133
Score = 41.6 bits (96), Expect = 5e-04
Identities = 13/19 (68%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 155 CCCCCCCCCCC--CCCWCC 171
CC CCCC CCC CCC C
Sbjct: 118 CCYCCCCLCCCFNCCCGKC 136
Score = 39.7 bits (91), Expect = 0.002
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 152 CPGCCCCCCCCCCCCCCWCC 171
C CC CCCC CCC CC
Sbjct: 113 CGLLTCCYCCCCLCCCFNCC 132
Score = 39.3 bits (90), Expect = 0.003
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 152 CPGCCCCCCCCCCCCCCWC 170
C CCCC CCC CCC C
Sbjct: 118 CCYCCCCLCCCFNCCCGKC 136
Score = 35.4 bits (80), Expect = 0.038
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 155 CCCCCCCCCCCCCCWCCSCLGG 176
C CC CCCC C C +C G
Sbjct: 113 CGLLTCCYCCCCLCCCFNCCCG 134
>gi|29126218 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Homo
sapiens]
Length = 199
Score = 40.4 bits (93), Expect = 0.001
Identities = 14/23 (60%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Query: 150 GPCPGC--CCCCCCCCCCCCCWC 170
G GC CCC CCCC CCC C
Sbjct: 118 GLLTGCYFCCCLCCCCNCCCGHC 140
Score = 37.4 bits (85), Expect = 0.010
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 156 CCCCCCCCCCCCCWCCSC 173
C CCC CCCC C C C
Sbjct: 123 CYFCCCLCCCCNCCCGHC 140
Score = 36.2 bits (82), Expect = 0.023
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 157 CCCCCCCCCCCCWCCSCLGGISSSP 181
C CCC CCCC CC SS P
Sbjct: 123 CYFCCCLCCCCNCCCGHCRPESSVP 147
>gi|123173777 keratin associated protein 5-8 [Homo sapiens]
Length = 187
Score = 39.7 bits (91), Expect = 0.002
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 31/86 (36%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPG------------------CCC-------CCC 160
CSS GGS+ G G G C G CCC CC
Sbjct: 47 CSSCGSCGGSKGGRGSCGGSKGDCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQ 106
Query: 161 CCCC--CC----CCWCCSCLGGISSS 180
CC CC CC CSC G SS
Sbjct: 107 SSCCKPCCSQSSCCKPCSCSSGCGSS 132
Score = 35.8 bits (81), Expect = 0.029
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 144 GWDGSAGPCPGC---CC---CCC--CCCCCCCCWCCSC 173
G G C GC CC CCC CCC C C SC
Sbjct: 13 GCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSC 50
Score = 32.3 bits (72), Expect = 0.33
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 16/47 (34%)
Query: 143 LGWDGSAGPCPGCC-------------CCCCCCCC---CCCCWCCSC 173
+G G +G C C CC CCC CCC CSC
Sbjct: 1 MGCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC 47
Score = 32.3 bits (72), Expect = 0.33
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 148 SAGPCPGCC---CCCCCCCCCCCCWCCSCLGGISSS 180
S+G CC CC CC CC C C G SS
Sbjct: 126 SSGCGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSS 161
Score = 31.6 bits (70), Expect = 0.56
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCCCCCCWCCSCLGGISSSPSS 183
G GS+ P CCC CCC C C C C GG S S
Sbjct: 22 GGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGRGSCGGS 66
Score = 30.8 bits (68), Expect = 0.95
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 7/47 (14%)
Query: 141 GPLGWDGSAGP-CPGC------CCCCCCCCCCCCCWCCSCLGGISSS 180
G G G G C GC C CC CCC C C+ S S
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 48
Score = 29.6 bits (65), Expect = 2.1
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 6/28 (21%)
Query: 152 CPGCCCCCCCC--CC----CCCCWCCSC 173
C CC CC CC CC CC C
Sbjct: 158 CGSSCCQSSCCKPCCSQSSCCVPICCQC 185
Score = 27.7 bits (60), Expect = 8.0
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 11/33 (33%)
Query: 151 PC---PGCC--CCCCCCC---CC---CCCWCCS 172
PC CC CCC C CC CC CCS
Sbjct: 141 PCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCS 173
>gi|60279697 keratin associated protein 5-7 [Homo sapiens]
Length = 165
Score = 38.9 bits (89), Expect = 0.003
Identities = 32/109 (29%), Positives = 33/109 (30%), Gaps = 39/109 (35%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGC-----------------CCC---------- 158
CSS GGS+ G G G C G CCC
Sbjct: 54 CSSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCYKPCCCSSGCGSSCCQ 113
Query: 159 --CC--CCCCCCCCWCCSCLGGISSSPSSVRMQHFFFQSCNNPSLRFSS 203
CC CCC CC C C G SS SC NP SS
Sbjct: 114 SSCCKPCCCQSSCCKPCCCSSGCGSSCCQ--------SSCCNPCCSQSS 154
Score = 36.2 bits (82), Expect = 0.023
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGC---CC---CCC--CCCCCCCCWCCSC 173
C S GS G G G C GC CC CCC CCC C C SC
Sbjct: 3 CCGCSEGCGSGCGGCGS-GCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSC 57
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCCCCCCWCCSCLGGISSSPSS 183
G GS+ P CCC CCC C C C C GG S S
Sbjct: 29 GGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGGS 73
Score = 31.2 bits (69), Expect = 0.73
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 144 GWDGSAGPCPGC------CCCCCCCCCCCCCWCCSCLGGISSS 180
G G C GC C CC CCC C C+ S S
Sbjct: 13 GCGGCGSGCGGCGSGCGGCGSSCCVPVCCCKPVCCCVPACSCS 55
Score = 29.6 bits (65), Expect = 2.1
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 6/28 (21%)
Query: 152 CPGCCCCCCCC--CC----CCCCWCCSC 173
C CC CC CC CC CC C
Sbjct: 136 CGSSCCQSSCCNPCCSQSSCCVPVCCQC 163
>gi|13994372 keratin associated protein 17-1 [Homo sapiens]
Length = 105
Score = 38.5 bits (88), Expect = 0.005
Identities = 19/36 (52%), Positives = 19/36 (52%), Gaps = 10/36 (27%)
Query: 150 GPCPGCCCCCCC----CC--CCC---CCWCC-SCLG 175
G CPG C CC CC CCC CC CC SC G
Sbjct: 2 GCCPGDCFTCCTQEQNCCEECCCQPGCCGCCGSCCG 37
Score = 34.3 bits (77), Expect = 0.086
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 152 CPGCCC---CCCCCCCCCCCWCCSCLG 175
C CCC CC CC CC C C G
Sbjct: 19 CEECCCQPGCCGCCGSCCGCGGSGCGG 45
Score = 33.5 bits (75), Expect = 0.15
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 3/51 (5%)
Query: 134 GSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSSPSSV 184
GS +G G G G GCC CC CC CC G + P+ +
Sbjct: 54 GSSCCGSGCGGCGGCGGCGGGCCGSSCCGSSCCGSGCC---GPVCCQPTPI 101
Score = 28.9 bits (63), Expect = 3.6
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 18/42 (42%)
Query: 153 PGCCCCC--CCCC-------------CC---CCCWCCSCLGG 176
PGCC CC CC C CC CC C GG
Sbjct: 26 PGCCGCCGSCCGCGGSGCGGSGCGGSCCGSSCCGSGCGGCGG 67
>gi|60099478 keratin associated protein 5-6 [Homo sapiens]
Length = 129
Score = 38.5 bits (88), Expect = 0.005
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCC--CCCCCCCCCCCCWCCSCLGGISSS 180
C+S GGS+ G G G C G C C C C CC C C G SS
Sbjct: 47 CTSCGSCGGSKGCCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGCGSS 103
Score = 35.8 bits (81), Expect = 0.029
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 144 GWDGSAGPCPGC---CC---CCC--CCCCCCCCWCCSC 173
G G C GC CC CCC CCC C C SC
Sbjct: 13 GCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCTSC 50
Score = 32.7 bits (73), Expect = 0.25
Identities = 23/69 (33%), Positives = 25/69 (36%), Gaps = 22/69 (31%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC------------CC---CC--CC---- 164
C S + G + G G GS G C C CC CC CC CC
Sbjct: 60 CGSCGGSKGGCGSCGGSKGGCGSCG-CSQCSCCKPCYCSSGCGSSCCQSSCCKPCCSQAS 118
Query: 165 CCCCWCCSC 173
CC CC C
Sbjct: 119 CCVPICCQC 127
Score = 32.3 bits (72), Expect = 0.33
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 16/47 (34%)
Query: 143 LGWDGSAGPCPGCC-------------CCCCCCCC---CCCCWCCSC 173
+G G +G C C CC CCC CCC CSC
Sbjct: 1 MGCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSC 47
Score = 30.0 bits (66), Expect = 1.6
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 11/44 (25%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCCCCC--C----WCCSCLGG 176
G GS+ P CCC CCC C C C C CC GG
Sbjct: 22 GGCGSSCCVPICCCKPVCCCVPACSCTSCGSCGGSKGCCGSCGG 65
Score = 29.6 bits (65), Expect = 2.1
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 141 GPLGWDGSAGP-CPGC------CCCCCCCCCCCCCWCCSCLGGIS 178
G G G G C GC C CC CCC C C+ S
Sbjct: 2 GCCGCSGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACS 46
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 38.1 bits (87), Expect = 0.006
Identities = 27/78 (34%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 147 GSAGPCPGCCCCCCCCC--CCCCCWC------CSCLGGISSSPSSVRMQHFFFQSCNNPS 198
GS G C C C C CC CCC C CSC S S + C + S
Sbjct: 67 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCK-------PCCSSS 119
Query: 199 LRFSSTPSFSALQPLLSS 216
R SS S +P SS
Sbjct: 120 GRGSSCCQSSCCKPCCSS 137
Score = 35.4 bits (80), Expect = 0.038
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 12/42 (28%)
Query: 144 GWDGSAGPC--------PGCC----CCCCCCCCCCCCWCCSC 173
G D S G C P CC CC CCC C C SC
Sbjct: 16 GCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSC 57
Score = 30.8 bits (68), Expect = 0.95
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 10/38 (26%)
Query: 152 CPGCCCC--CC--------CCCCCCCCWCCSCLGGISS 179
C C CC CC CC CC CCS G SS
Sbjct: 106 CSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSS 143
Score = 28.9 bits (63), Expect = 3.6
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 16/46 (34%)
Query: 144 GWDGSAGPCPGCC-------------CCCCCCCC---CCCCWCCSC 173
G S G C C CC CC CCC CSC
Sbjct: 9 GCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSC 54
Score = 28.9 bits (63), Expect = 3.6
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 19/53 (35%)
Query: 147 GSAGPCPGCCCC------CCCC--CC--------CC---CCWCCSCLGGISSS 180
G C C CC C CC CC CC CC C G SS
Sbjct: 91 GCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCSSSGCGSS 143
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 38.1 bits (87), Expect = 0.006
Identities = 30/79 (37%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGC--CCCC--CCC-------CC--CCCCWCCSCLG-GIS 178
GGS+ G G G C GC C CC CCC CC CC CCS G G S
Sbjct: 175 GGSKGGCGSCGGSKGGCGSC-GCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSS 233
Query: 179 SSPSSVRMQHFFFQSCNNP 197
SS + SC P
Sbjct: 234 CCQSSCCKPYCCQSSCCKP 252
Score = 37.7 bits (86), Expect = 0.008
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
C S + G + G G GS G G C C C C CC CC C G SS
Sbjct: 161 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCSCCKPCC-CSSGCGSS 214
Score = 35.8 bits (81), Expect = 0.029
Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 144 GWDGSAGPCPGC---CC---CCC--CCCCCCCCWCCSC 173
G G C GC CC CCC CCC C C SC
Sbjct: 34 GCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSC 71
Score = 32.3 bits (72), Expect = 0.33
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCCCCCCWCCSCLGGISSSPSS 183
G GS+ P CCC CCC C C C C GG S S
Sbjct: 43 GGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGYGSCGGS 87
Score = 32.3 bits (72), Expect = 0.33
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 9/52 (17%)
Query: 152 CPGCCCCCCCCCCCCCCWCCSCLGGISSSPSSVRMQHFFFQSCNNPSLRFSS 203
C CC CC CC CCS G SS S SC NP SS
Sbjct: 235 CQSSCCKPYCCQSSCCKPCCSSSGCGSSCCQS---------SCCNPCCSQSS 277
Score = 31.2 bits (69), Expect = 0.73
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 144 GWDGSAGPCPGC------CCCCCCCCCCCCCWCCSCLGGISSS 180
G G C GC C CC CCC C C+ S S
Sbjct: 27 GCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 69
Score = 30.8 bits (68), Expect = 0.95
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 6/32 (18%)
Query: 148 SAGPCPGCCCCCCCC--CC----CCCCWCCSC 173
S+ C CC CC CC CC CC C
Sbjct: 255 SSSGCGSSCCQSSCCNPCCSQSSCCVPVCCQC 286
>gi|39752687 hypothetical protein LOC375791 [Homo sapiens]
Length = 144
Score = 37.7 bits (86), Expect = 0.008
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 155 CCCCCCCCCC-----CCCCWCCSCL 174
CCCC CC CC C C CC C+
Sbjct: 118 CCCCPCCHCCHCPPFCRCHSCCCCV 142
Score = 32.3 bits (72), Expect = 0.33
Identities = 20/52 (38%), Positives = 21/52 (40%), Gaps = 10/52 (19%)
Query: 127 SSLSLTGGSRLATAGPLG-WDGSAGPCPGCCCCCCCCCCC-------CCCWC 170
SS G A P+G D A C CCC CC CC C CC C
Sbjct: 92 SSSQRQAGLTYAGPPPVGRGDDIAHHC--CCCPCCHCCHCPPFCRCHSCCCC 141
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 37.7 bits (86), Expect = 0.008
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 134 GSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSC-LGGISSSPSSVR 185
GS A G G +G C CCC CCC C C SC GG S S R
Sbjct: 49 GSGCAGCGGCG----SGCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGGSKR 97
Score = 35.8 bits (81), Expect = 0.029
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 153 PGCCCCCCC---CCCCCCCWCCSCLGGISSS 180
P CC CC CC CC CSC G SS
Sbjct: 181 PYCCQSSCCKPYCCQSSCCKPCSCFSGCGSS 211
Score = 30.0 bits (66), Expect = 1.6
Identities = 23/73 (31%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLG-GISSSPSSV 184
C S + G + G G GS G G C C CC CC G G S SS
Sbjct: 119 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGCGSSCCQSSC 178
Query: 185 RMQHFFFQSCNNP 197
+ SC P
Sbjct: 179 CKPYCCQSSCCKP 191
Score = 29.6 bits (65), Expect = 2.1
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 6/28 (21%)
Query: 152 CPGCCCCCCC---CCC---CCCCWCCSC 173
C CC C CCC CC CC C
Sbjct: 208 CGSSCCQSSCYKPCCCQSSCCVPVCCQC 235
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 37.4 bits (85), Expect = 0.010
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 97 ISLPSAITTVKYMYLPLRSTQSTVFMLEKCSSLSLTGGSRLATAGPLGWDGSAGPCPGCC 156
++ S+ T P S T ++ GG +AG G G+ G
Sbjct: 111 VAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGS---GAS 167
Query: 157 CCCCCCCCCC 166
CC CCCCC C
Sbjct: 168 CCPCCCCCGC 177
Score = 35.8 bits (81), Expect = 0.029
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 7/60 (11%)
Query: 115 STQSTVFMLEKCSSLSLTGGSRLATAGPLGWDGS------AGPCPGCCCCCCCCCCCCCC 168
++ ST CS + G A AG +G GS G G CC CCCCC C
Sbjct: 119 TSSSTSTPTSSCSMTAADFGGG-AAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGC 177
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 37.4 bits (85), Expect = 0.010
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 133 GGSRLATAGPLGWDGSAGP-CPGC--CCCCCCCCC---CCCCWCCSC 173
GGS+ G G G C GC CC CCC CCC CSC
Sbjct: 103 GGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSC 149
Score = 36.2 bits (82), Expect = 0.023
Identities = 23/79 (29%), Positives = 26/79 (32%), Gaps = 22/79 (27%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCC----------------------CCCC 163
C S + G+ + G G GS G C G C C CCC
Sbjct: 157 CGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCS 216
Query: 164 CCCCCWCCSCLGGISSSPS 182
C C C GG SS S
Sbjct: 217 CSSCGSCAGSKGGCGSSCS 235
Score = 35.4 bits (80), Expect = 0.038
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSC-LGGISS 179
GGS+ G GS+ P CCC CCC C C SC GG S
Sbjct: 113 GGSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACS-CSSCGKGGCGS 159
Score = 35.0 bits (79), Expect = 0.050
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 16/67 (23%)
Query: 133 GGSRLATAGPLGWDGSAGPCPGCCCCCCCC----------------CCCCCCWCCSCLGG 176
GGS+ G GS P CCC C C C CC CCS G
Sbjct: 191 GGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSSGCG 250
Query: 177 ISSSPSS 183
S SS
Sbjct: 251 SSCCQSS 257
Score = 33.1 bits (74), Expect = 0.19
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 14/40 (35%)
Query: 147 GSAGPCPGCCCCCCCC--CCC------------CCCWCCS 172
GS G C C C CC CCC CC CCS
Sbjct: 225 GSKGGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCS 264
Score = 32.3 bits (72), Expect = 0.33
Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 20/64 (31%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC-------CC---CC--CC----CCCCW 169
CSS GS+ G G S C CCC CC CC CC CC
Sbjct: 217 CSSCGSCAGSK----GGCGSSCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPV 272
Query: 170 CCSC 173
CC C
Sbjct: 273 CCQC 276
Score = 30.8 bits (68), Expect = 0.95
Identities = 25/74 (33%), Positives = 25/74 (33%), Gaps = 17/74 (22%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCC------CCCCCCCC---------CWC 170
C S GS G G G C GC C CC CCC C C
Sbjct: 3 CCGCSGGCGSSCGGCGS-GCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSC 61
Query: 171 CSC-LGGISSSPSS 183
SC GG SS S
Sbjct: 62 SSCGKGGCGSSGGS 75
Score = 28.5 bits (62), Expect = 4.7
Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 3/31 (9%)
Query: 153 PGCCCCCCCCCCCC---CCWCCSCLGGISSS 180
P CCC C C C C C C G S
Sbjct: 139 PMCCCVPACSCSSCGKGGCGSCGCSKGACGS 169
>gi|60593040 keratin associated protein 5-10 [Homo sapiens]
Length = 202
Score = 37.0 bits (84), Expect = 0.013
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCCCCCCWCCSC 173
G+ G C CC CCC CCC C C SC
Sbjct: 30 GYGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSC 64
Score = 36.6 bits (83), Expect = 0.017
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 144 GWDGSAGPCPGCCCCCC---CCC--CCCCCWCCSC 173
G G C GC CC CCC CCC CSC
Sbjct: 27 GCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPACSC 61
Score = 36.6 bits (83), Expect = 0.017
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 10/72 (13%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSSPSSVR 185
C S + G + G G GS G G C C C C CC CC C G S S
Sbjct: 104 CGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCC-CSSGCGSCCQS-- 160
Query: 186 MQHFFFQSCNNP 197
SC NP
Sbjct: 161 -------SCCNP 165
Score = 35.4 bits (80), Expect = 0.038
Identities = 21/62 (33%), Positives = 24/62 (38%), Gaps = 14/62 (22%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCC--CCC-----------CCCCCCCWCCS 172
C S + G + G G GS G C C CC CCC CC CCC
Sbjct: 114 CGSCGGSKGGCGSCGGSKGGCGSCG-CSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSC 172
Query: 173 CL 174
C+
Sbjct: 173 CV 174
Score = 32.7 bits (73), Expect = 0.25
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 16/38 (42%)
Query: 152 CPGCCC---CC---CC---CC--CCC---CC--WCCSC 173
C CCC CC CC CC CCC CC CC C
Sbjct: 163 CNPCCCQSSCCVPVCCQSSCCKPCCCQSSCCVPVCCQC 200
Score = 32.0 bits (71), Expect = 0.43
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 9/36 (25%)
Query: 147 GSAGPCPGCCCCCCCC---CC---CC---CCWCCSC 173
G C CC CCC CC CC CC C C
Sbjct: 153 GCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCKPCCC 188
Score = 30.0 bits (66), Expect = 1.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 144 GWDGSAGPCPGCCC---CCC--CCCCCCCCWCCSCLGGISSSPSS 183
G GS+ P CCC CCC C C C C G S S
Sbjct: 36 GGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGDCGSCGGS 80
>gi|53292629 keratin associated protein 5-11 [Homo sapiens]
Length = 156
Score = 36.6 bits (83), Expect = 0.017
Identities = 21/55 (38%), Positives = 22/55 (40%), Gaps = 11/55 (20%)
Query: 140 AGPLGWDGSAGPCPGCCC---CCC--CCCCCCCCWCCSC------LGGISSSPSS 183
+G G G C CC CCC CCC C C SC GG S SS
Sbjct: 19 SGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCSSCGSCGGSKGGCGSCGSS 73
Score = 35.0 bits (79), Expect = 0.050
Identities = 30/87 (34%), Positives = 33/87 (37%), Gaps = 16/87 (18%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSSPSSVR 185
CSS GGS+ G GS G G C C C CC CCS SS S
Sbjct: 54 CSSCGSCGGSK-------GGCGSCGSSKGGCGSCGCSQSNCCKPCCS-----SSGCGSFC 101
Query: 186 MQHFFFQSCNNPSLRFSSTPSFSALQP 212
Q SC+ P SS S +P
Sbjct: 102 CQ----SSCSKPCCCQSSCCQSSCCKP 124
Score = 31.6 bits (70), Expect = 0.56
Identities = 16/49 (32%), Positives = 18/49 (36%)
Query: 132 TGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
+GG G G G G C CC CCC C C+ S S
Sbjct: 7 SGGCGSGCGGCGSGSGGCGSGCGGCGSSCCVPICCCKPVCCCVPACSCS 55
Score = 31.2 bits (69), Expect = 0.73
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 11/33 (33%)
Query: 152 CPGCCCCCCCC---C---CCC---CC--WCCSC 173
C CCC CC C CCC CC CC C
Sbjct: 122 CKPCCCQSSCCQSSCFKPCCCQSSCCVPVCCQC 154
Score = 30.4 bits (67), Expect = 1.2
Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
Query: 155 CCC---CC---CCCCCCCCCWCC 171
CCC CC CC CCC CC
Sbjct: 110 CCCQSSCCQSSCCKPCCCQSSCC 132
>gi|60593036 keratin associated protein 5-3 [Homo sapiens]
Length = 238
Score = 36.2 bits (82), Expect = 0.023
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGPCPGC---CCCCCCCCCCCCCWCCSCLG 175
CSS GGS+ G G G C G C CC CC C SC G
Sbjct: 54 CSSCGSCGGSKGVCGSCGGCKGGCGSCGGSKGGCGSSCCVPVCCSSSCGSCGG 106
Score = 35.0 bits (79), Expect = 0.050
Identities = 23/60 (38%), Positives = 23/60 (38%), Gaps = 9/60 (15%)
Query: 126 CSSLSLTGGSRLATAGPL--GWDGSAGPC-PGCC---CCCCCCCCC---CCCWCCSCLGG 176
CS S GS G G G C GCC CCC CCC C C C GG
Sbjct: 3 CSGCSGGCGSSCGGCGSSCGGCGSGYGGCGSGCCVPVCCCKPVCCCVPACSCSSCGSCGG 62
Score = 33.1 bits (74), Expect = 0.19
Identities = 21/57 (36%), Positives = 22/57 (38%), Gaps = 2/57 (3%)
Query: 127 SSLSLTGGSRLATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWC-CSCLGGISSSPS 182
SS GGS+ G G G C GC C C CCC C SC PS
Sbjct: 99 SSCGSCGGSKGVCGFRGGSKGGCGSC-GCSQCSCYKPCCCSSGCGSSCCQSSCCKPS 154
Score = 33.1 bits (74), Expect = 0.19
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 152 CPGCCCCCCCCCCCC----CCWCCSCLGGISSS 180
C CC CC CC CC C C G SS
Sbjct: 180 CGSSCCQSSCCKPCCSQSSCCKPCCCSSGCGSS 212
Score = 30.8 bits (68), Expect = 0.95
Identities = 12/29 (41%), Positives = 12/29 (41%)
Query: 152 CPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
C CC CC CC C C G SS
Sbjct: 155 CSQSSCCKPCCSQSSCCKPCCCSSGCGSS 183
Score = 29.6 bits (65), Expect = 2.1
Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 15/37 (40%)
Query: 152 CPGCCC-------CCCCCCC--------CCCCWCCSC 173
C CCC CC CC CC CC C
Sbjct: 200 CKPCCCSSGCGSSCCQSSCCKPCSSQSSCCVPICCQC 236
Score = 28.5 bits (62), Expect = 4.7
Identities = 16/43 (37%), Positives = 16/43 (37%)
Query: 155 CCCCCCCCCCCCCCWCCSCLGGISSSPSSVRMQHFFFQSCNNP 197
CC CC CC CCS G S SS SC P
Sbjct: 160 CCKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCKP 202
Score = 28.1 bits (61), Expect = 6.1
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 13/34 (38%)
Query: 152 CPGCC----CC--CCC-------CCCCCCCWCCS 172
C CC CC CCC CC CC CS
Sbjct: 190 CKPCCSQSSCCKPCCCSSGCGSSCCQSSCCKPCS 223
>gi|29294617 sweet taste receptor T1r isoform a [Homo sapiens]
Length = 480
Score = 35.8 bits (81), Expect = 0.029
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 154 GCCCCCCCCCCCCCCWCCSCLGG 176
GCC CCCCCC +CL G
Sbjct: 457 GCCWQLTRCCCCCCLGLLACLPG 479
>gi|118572608 keratin associated protein 4-5 [Homo sapiens]
Length = 181
Score = 35.8 bits (81), Expect = 0.029
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 14/65 (21%)
Query: 152 CPGCCC---CC--------CCCCCCCCCWCC--SCLGGISSSPSSVRMQHFFFQSCNNPS 198
C CCC CC CCC CC CC C + P+ R SC +PS
Sbjct: 76 CRPCCCQTTCCRTTCCRTTCCCPSCCVSSCCRPQCCQSVCCQPTCCR-PSCCISSCCHPS 134
Query: 199 LRFSS 203
SS
Sbjct: 135 CCESS 139
Score = 31.2 bits (69), Expect = 0.73
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 10/56 (17%)
Query: 153 PGCCCCCCC---CCCCCCCWCCSCLGGISSSPSSVRMQHFFFQSCNNPSLRFSSTP 205
P CC CC CC CC C C+ + S +C P+ S+ P
Sbjct: 123 PSCCISSCCHPSCCESSCCRPCCCVRPVCGRVSC-------HTTCYRPTCVISTCP 171
Score = 30.4 bits (67), Expect = 1.2
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 3/24 (12%)
Query: 153 PGCCCCCCC---CCCCCCCWCCSC 173
P CC CC CC CC C C
Sbjct: 58 PSCCISSCCRPYCCESSCCRPCCC 81
Score = 28.9 bits (63), Expect = 3.6
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 153 PGCCCCCCCCCCCCCCWCC 171
P CC CC CC +CC
Sbjct: 53 PTCCHPSCCISSCCRPYCC 71
Score = 28.1 bits (61), Expect = 6.1
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 153 PGCCCCCCCCCCCCCCWCC--SCLGGISSSPS 182
P CC CC CC CC C + P+
Sbjct: 23 PSCCQTTCCRTTCCRPSCCKPQCCQSVCYQPT 54
Score = 28.1 bits (61), Expect = 6.1
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 9/28 (32%)
Query: 153 PGCC---CCCCCCC---CC---CCCWCC 171
P CC CC CC CC CC CC
Sbjct: 118 PTCCRPSCCISSCCHPSCCESSCCRPCC 145
Score = 27.7 bits (60), Expect = 8.0
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 11/31 (35%)
Query: 152 CPGCCC---CC---CC---CC--CCCCCWCC 171
C CC CC CC CC CCC CC
Sbjct: 56 CHPSCCISSCCRPYCCESSCCRPCCCQTTCC 86
>gi|239750462 PREDICTED: similar to hCG2033802 [Homo sapiens]
Length = 188
Score = 35.4 bits (80), Expect = 0.038
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 152 CPGCCCCCCCCCCCCCCWCCSCL 174
C C C C C C C W C C+
Sbjct: 65 CDVCMCTCTCMCVCVSAWMCVCM 87
>gi|51972220 keratin associated protein 5-2 [Homo sapiens]
Length = 177
Score = 35.4 bits (80), Expect = 0.038
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 126 CSSLSLTGGSRL---ATAGPLGWDGSAGPCPGCCCCCCCCCCCCCCWCCSCLGGISSS 180
C+S GGS+ + G G GS G G C C C CC CC C G SS
Sbjct: 75 CTSCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCC-CSSGCGSS 131
Score = 33.9 bits (76), Expect = 0.11
Identities = 21/61 (34%), Positives = 23/61 (37%), Gaps = 15/61 (24%)
Query: 126 CSSLSLTGGSRLATAGPLGWDGSAGP-----CPGCCC-------CC---CCCCCCCCCWC 170
C S + G + G G GS G C CCC CC CC CCC C
Sbjct: 88 CGSCGGSKGGCGSCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSCCKPCCCQSSC 147
Query: 171 C 171
C
Sbjct: 148 C 148
Score = 33.1 bits (74), Expect = 0.19
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 16/38 (42%)
Query: 152 CPGCCC---CC---CC---CC--CCC---CC--WCCSC 173
C CCC CC CC CC CCC CC CC C
Sbjct: 138 CKPCCCQSSCCVPVCCQSSCCKPCCCQSNCCVPVCCQC 175
Score = 30.0 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Query: 144 GWDGSAGPCPGC---CCCCCCCCCCCCCW--CCSC 173
G G + C GC C CCC C W CSC
Sbjct: 41 GCGGCSSSCGGCGSRCYVPVCCCKPVCSWVPACSC 75
Score = 29.3 bits (64), Expect = 2.8
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Query: 148 SAGPCPGCC---CC--CCCCCCCCCCWCC 171
S+G CC CC CCC CC CC
Sbjct: 125 SSGCGSSCCQSSCCKPCCCQSSCCVPVCC 153
>gi|21361405 regulator of G-protein signalling 17 [Homo sapiens]
Length = 210
Score = 35.0 bits (79), Expect = 0.050
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 147 GSAGPCPGCCCCCCCCCCCCC 167
G+ P CC C CCCC C C
Sbjct: 20 GNQRPNNTCCFCWCCCCSCSC 40
Score = 33.5 bits (75), Expect = 0.15
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 156 CCCCCCCCCCCCC 168
CC C CCCC C C
Sbjct: 28 CCFCWCCCCSCSC 40
Score = 32.7 bits (73), Expect = 0.25
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 161 CCCCCCCCWCCSCL 174
CC C CCC CSCL
Sbjct: 28 CCFCWCCCCSCSCL 41
Score = 32.7 bits (73), Expect = 0.25
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 158 CCCCCCCCCCCWC 170
CC C CCCC C C
Sbjct: 28 CCFCWCCCCSCSC 40
>gi|13654235 regulator of G-protein signaling 20 isoform b [Homo
sapiens]
Length = 241
Score = 35.0 bits (79), Expect = 0.050
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCC 168
G G+ CC C CCCC C C
Sbjct: 49 GQPGAGSRGSNACCFCWCCCCSCSC 73
Score = 33.5 bits (75), Expect = 0.15
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 154 GCCCCCCCCCCCCCCWC 170
G CC C CCCC C C
Sbjct: 57 GSNACCFCWCCCCSCSC 73
Score = 32.7 bits (73), Expect = 0.25
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 161 CCCCCCCCWCCSCL 174
CC C CCC CSCL
Sbjct: 61 CCFCWCCCCSCSCL 74
>gi|41281805 regulator of G-protein signaling 20 isoform a [Homo
sapiens]
Length = 388
Score = 35.0 bits (79), Expect = 0.050
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 144 GWDGSAGPCPGCCCCCCCCCCCCCC 168
G G+ CC C CCCC C C
Sbjct: 196 GQPGAGSRGSNACCFCWCCCCSCSC 220
Score = 33.5 bits (75), Expect = 0.15
Identities = 10/17 (58%), Positives = 10/17 (58%)
Query: 154 GCCCCCCCCCCCCCCWC 170
G CC C CCCC C C
Sbjct: 204 GSNACCFCWCCCCSCSC 220
Score = 32.7 bits (73), Expect = 0.25
Identities = 10/14 (71%), Positives = 10/14 (71%)
Query: 161 CCCCCCCCWCCSCL 174
CC C CCC CSCL
Sbjct: 208 CCFCWCCCCSCSCL 221
>gi|134244291 G-protein coupled receptor 37 like 1 [Homo sapiens]
Length = 481
Score = 35.0 bits (79), Expect = 0.050
Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 11/114 (9%)
Query: 98 SLPSAITTVKYMYLPLRSTQSTVFMLEKCSSLS------LTGGSRLATAGPLGWDGSAGP 151
+LP + + YL T+ T+ +L + S +T L PLG
Sbjct: 372 TLPENVCNIVVAYLSTELTRQTLDLLGLINQFSTFFKGAITPVLLLCICRPLGQ-----A 426
Query: 152 CPGCCCCCCCCCCCCCCWCCSCLGGISSSPSSVRMQHFFFQSCNNPSLRFSSTP 205
CCCCCCC C + G + + V +F + +P L TP
Sbjct: 427 FLDCCCCCCCEECGGASEASAANGSDNKLKTEVSSSIYFHKPRESPPLLPLGTP 480
>gi|4502873 chloride channel 6 isoform ClC-6a [Homo sapiens]
Length = 869
Score = 34.7 bits (78), Expect = 0.066
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 152 CPGCCCCCCCCCCCC 166
C G CCCC CCCC
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 32.0 bits (71), Expect = 0.43
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 159 CCCCCCCCCCWCCSC 173
C CCCC WCC C
Sbjct: 4 CRGSLCCCCRWCCCC 18
Score = 30.4 bits (67), Expect = 1.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Query: 158 CCCCCCCCCC 167
CCCC CCCC
Sbjct: 9 CCCCRWCCCC 18
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.137 0.472
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,930,033
Number of Sequences: 37866
Number of extensions: 504158
Number of successful extensions: 8098
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2920
Number of HSP's gapped (non-prelim): 2222
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.