Guide to the Human Genome
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Name: TAS1R1 Sequence: fasta or formatted (480aa) NCBI GI: 29294617
Description:

sweet taste receptor T1r isoform a

Referenced in:

Taste Receptors

Other entries for this name:
alt prot [841aa] sweet taste receptor T1r isoform b
alt prot [587aa] sweet taste receptor T1r isoform c
alt prot [324aa] sweet taste receptor T1r isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         48           2
 C cysteine            5.6         27           6
 D aspartate           2.9         14           2
 E glutamate           3.3         16           2
 F phenylalanine       3.5         17           2
 G glycine             7.1         34           1
 H histidine           3.1         15           2
 I isoleucine          3.1         15           1
 K lysine              2.9         14           2
 L leucine            12.5         60           3
 M methionine          2.3         11           1
 N asparagine          2.3         11           2
 P proline             4.6         22           1
 Q glutamine           5.0         24           1
 R arginine            5.4         26           1
 S serine              8.5         41           2
 T threonine           5.4         26           2
 V valine              7.1         34           4
 W tryptophan          2.1         10           1
 Y tyrosine            3.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sweet taste receptor T1r isoform a 
TAS1R1                0.858   sweet taste receptor T1r isoform b 
TAS1R1                0.331   sweet taste receptor T1r isoform d 
TAS1R1                0.331   sweet taste receptor T1r isoform c 
TAS1R2                0.241   taste receptor, type 1, member 2 
TAS1R3                0.214   taste receptor, type 1, member 3 
CASR                  0.201   calcium-sensing receptor 
GPRC6A                0.160   G protein-coupled receptor, family C, group 6, memb...
GRM2                  0.111   glutamate receptor, metabotropic 2 isoform a precurs...
GRM5                  0.107   glutamate receptor, metabotropic 5 isoform a precur...
GRM5                  0.107   glutamate receptor, metabotropic 5 isoform b precurso...
GRM4                  0.100   glutamate receptor, metabotropic 4 
GRM3                  0.099   glutamate receptor, metabotropic 3 precursor 
GRM6                  0.097   glutamate receptor, metabotropic 6 precursor 
GRM8                  0.095   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.095   glutamate receptor, metabotropic 8 isoform a precur...
GRM1                  0.090   glutamate receptor, metabotropic 1 isoform beta pre...
GRM1                  0.090   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM7                  0.083   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.083   glutamate receptor, metabotropic 7 isoform a precurso...
GABBR1                0.031   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.031   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.031   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR2                0.029   G protein-coupled receptor 51 
GRIN1                 0.021   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.021   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.021   NMDA receptor 1 isoform NR1-2 precursor 
GUCY2F                0.016   guanylate cyclase 2F 
GRIN2C                0.013   N-methyl-D-aspartate receptor subunit 2C precursor [...
LOC100131830          0.011   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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